com.pixelmed.anatproc

Class Anatomy

java.lang.Object

com.pixelmed.anatproc.Anatomy

Direct Known Subclasses:

CTAnatomy, ProjectionXRayAnatomy

public class Anatomy
extends Object

This class encapsulates information pertaining to anatomy of CT images.

Utility methods provide for the detection of anatomy from various header attributes regardless of whether these are formal codes, code strings or free text comments.

Field Summary

Fields

Modifier and Type	Field and Description
protected static DisplayableAnatomicConcept[]	anatomicConceptEntries
protected static DictionaryOfConcepts	anatomyConcepts
protected static String[]	badAnatomyWords
protected static String[]	badLateralityOrViewOrAnatomyPhraseTriggers

Constructor Summary

Constructors

Constructor and Description
Anatomy()

Method Summary

Modifier and Type	Method and Description
static DisplayableConcept	findAmongstGeneralAttributes(AttributeList list, DictionaryOfConcepts concepts, String[] badPhraseTriggers)
static DisplayableAnatomicConcept	findAnatomicConcept(AttributeList list)
static DictionaryOfConcepts	getAnatomyConcepts()
static void	main(String[] arg) Read the DICOM input file and extract anatomical information.
protected static String[]	newStringArray(String... values)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

anatomicConceptEntries

protected static DisplayableAnatomicConcept[] anatomicConceptEntries

anatomyConcepts

protected static DictionaryOfConcepts anatomyConcepts

badAnatomyWords

protected static String[] badAnatomyWords

badLateralityOrViewOrAnatomyPhraseTriggers

protected static String[] badLateralityOrViewOrAnatomyPhraseTriggers

Constructor Detail

Anatomy

public Anatomy()

Method Detail

findAmongstGeneralAttributes

public static DisplayableConcept findAmongstGeneralAttributes(AttributeList list,
                                                              DictionaryOfConcepts concepts,
                                                              String[] badPhraseTriggers)

findAnatomicConcept

public static DisplayableAnatomicConcept findAnatomicConcept(AttributeList list)

getAnatomyConcepts

public static DictionaryOfConcepts getAnatomyConcepts()

main

public static void main(String[] arg)

Read the DICOM input file and extract anatomical information.

Parameters:

arg - array of one string, the filename to read

newStringArray

protected static String[] newStringArray(String... values)