com.pixelmed.apps

Class DoseUtility

java.lang.Object

java.awt.Component

java.awt.Container

java.awt.Window

java.awt.Frame

javax.swing.JFrame

com.pixelmed.display.ApplicationFrame

com.pixelmed.apps.DoseUtility

All Implemented Interfaces:

java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants

public class DoseUtility
extends ApplicationFrame

This class is an application for retrieving dose information about DICOM studies of patients.

It is configured by use of a properties file that resides in the user's home directory in .com.pixelmed.display.DoseUtility.properties.

It supports retrieval of Dose SR objects and dose screen save images.

See Also:

Serialized Form

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
protected class	DoseUtility.ConfigureActionListener
protected class	DoseUtility.ImportActionListener
protected class	DoseUtility.ImportWorker
protected class	DoseUtility.LogActionListener
protected class	DoseUtility.MakeSRActionListener
protected class	DoseUtility.MakeSRWorker
protected class	DoseUtility.OurMediaImporter
protected class	DoseUtility.OurMultipleInstanceTransferStatusHandler
protected class	DoseUtility.OurQueryTreeBrowser
protected class	DoseUtility.OurReceivedObjectHandler
protected class	DoseUtility.OurSourceDatabaseTreeBrowser
protected class	DoseUtility.PurgeActionListener
protected class	DoseUtility.PurgeWorker
protected class	DoseUtility.QueryActionListener
protected class	DoseUtility.QueryWorker
protected class	DoseUtility.RegistryActionListener
protected class	DoseUtility.RegistryWorker
protected class	DoseUtility.ReportActionListener
protected class	DoseUtility.ReportWorker
protected class	DoseUtility.RetrieveActionListener
protected class	DoseUtility.SendActionListener
protected class	DoseUtility.SendWorker
protected class	DoseUtility.ValidateActionListener
protected class	DoseUtility.ValidateWorker
protected class	DoseUtility.ViewActionListener
protected class	DoseUtility.ViewWorker

Nested classes/interfaces inherited from class javax.swing.JFrame

javax.swing.JFrame.AccessibleJFrame

Nested classes/interfaces inherited from class java.awt.Frame

java.awt.Frame.AccessibleAWTFrame

Nested classes/interfaces inherited from class java.awt.Window

java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type

Nested classes/interfaces inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

Fields

Modifier and Type	Field and Description
protected javax.swing.JCheckBox	caseSensitiveCodeMeaningValidationCheckBox
protected static java.lang.String	caseSensitiveCodeMeaningValidationLabelText
protected static java.lang.String	configureButtonLabel
protected static java.lang.String	configureButtonToolTipText
protected DatabaseTreeRecord[]	currentDatabaseTreeRecordSelections
protected QueryInformationModel	currentRemoteQueryInformationModel
protected QueryTreeBrowser	currentRemoteQueryTreeBrowser
protected SafeCursorChanger	cursorChanger
protected javax.swing.JCheckBox	deidentifyWhenSendingToRegistryCheckBox
protected static java.lang.String	deidentifyWhenSendingToRegistryLabelText
protected FTPApplicationProperties	ftpApplicationProperties
protected FTPRemoteHostInformation	ftpRemoteHostInformation
protected static java.lang.String	importButtonLabel
protected static java.lang.String	importButtonToolTipText
protected java.lang.String	importDirectoryPath
protected static java.lang.String	localDatabaseName
protected static java.lang.String	localDatabaseServerName
protected static java.lang.String	logButtonLabel
protected static java.lang.String	logButtonToolTipText
protected MessageLogger	logger
protected static int	loggerDialogHeightWanted
protected static int	loggertDialogWidthWanted
protected static java.lang.String	loggerTitleMessage
protected static java.lang.String	makeSRButtonLabel
protected static java.lang.String	makeSRButtonToolTipText
protected NetworkApplicationInformation	networkApplicationInformation
protected NetworkApplicationProperties	networkApplicationProperties
protected java.lang.String	ourCalledAETitle
protected javax.swing.JCheckBox	processOnlyDoseSeriesRecordCheckBox
protected static java.lang.String	processOnlyDoseSeriesRecordLabelText
protected SafeProgressBarUpdaterThread	progressBarUpdater
protected static java.lang.String	propertiesFileName
protected static java.lang.String	propertyName_CurrentlySelectedDoseRegistry
protected static java.lang.String	propertyName_DicomCurrentlySelectedQueryTargetAE
protected static java.lang.String	propertyName_DicomCurrentlySelectedStorageTargetAE
protected static java.lang.String	purgeButtonLabel
protected static java.lang.String	purgeButtonToolTipText
protected static java.lang.String	queryButtonLabel
protected static java.lang.String	queryButtonToolTipText
protected javax.swing.JTextField	queryFilterPatientIDTextField
protected javax.swing.JTextField	queryFilterPatientNameTextField
protected javax.swing.JTextField	queryFilterStudyDateTextField
protected static java.lang.String	queryIntroductionLabelText
protected static java.lang.String	queryPatientIDLabelText
protected static java.lang.String	queryPatientIDToolTipText
protected static java.lang.String	queryPatientNameLabelText
protected static java.lang.String	queryPatientNameToolTipText
protected static java.lang.String	queryStudyDateLabelText
protected static java.lang.String	queryStudyDateToolTipText
protected static java.lang.String	registryButtonLabel
protected static java.lang.String	registryButtonToolTipText
protected javax.swing.JPanel	remoteQueryRetrievePanel
protected static java.lang.String	reportButtonLabel
protected static java.lang.String	reportButtonToolTipText
protected static int	reportDialogHeightWanted
protected static int	reportDialogWidthWanted
protected javax.swing.JCheckBox	reportTabularLayoutCheckBox
protected static java.lang.String	reportTabularLayoutLabelText
protected static java.lang.String	reportTitleMessage
protected static java.lang.String	retrieveButtonLabel
protected static java.lang.String	retrieveButtonToolTipText
protected javax.swing.JCheckBox	retrieveOnlyDoseSeriesRecordCheckBox
protected static java.lang.String	retrieveOnlyDoseSeriesRecordLabelText
protected java.io.File	savedImagesFolder
protected static java.lang.String	sendButtonLabel
protected static java.lang.String	sendButtonToolTipText
protected javax.swing.JCheckBox	showDetailedLogCheckBox
protected static java.lang.String	showDetailedLogLabelText
protected javax.swing.JCheckBox	showOnlyDoseSummaryCheckBox
protected static java.lang.String	showOnlyDoseSummaryLabelText
protected DatabaseInformationModel	srcDatabase
protected javax.swing.JPanel	srcDatabasePanel
protected StorageSOPClassSCPDispatcher	storageSOPClassSCPDispatcher
protected static int	textFieldLengthForQueryPatientID
protected static int	textFieldLengthForQueryPatientName
protected static int	textFieldLengthForQueryStudyDate
protected static java.lang.String	validateButtonLabel
protected static java.lang.String	validateButtonToolTipText
protected static DicomSRValidator	validator
protected static int	validatorFrameHeightWanted
protected static int	validatorFrameWidthWanted
protected static java.lang.String	viewButtonLabel
protected static java.lang.String	viewButtonToolTipText
protected static int	viewerFrameHeightWanted
protected static int	viewerFrameWidthWanted

Fields inherited from class com.pixelmed.display.ApplicationFrame

resourceBundle, resourceBundleName, statusBarManager

Fields inherited from class javax.swing.JFrame

accessibleContext, EXIT_ON_CLOSE, rootPane, rootPaneCheckingEnabled

Fields inherited from class java.awt.Frame

CROSSHAIR_CURSOR, DEFAULT_CURSOR, E_RESIZE_CURSOR, HAND_CURSOR, ICONIFIED, MAXIMIZED_BOTH, MAXIMIZED_HORIZ, MAXIMIZED_VERT, MOVE_CURSOR, N_RESIZE_CURSOR, NE_RESIZE_CURSOR, NORMAL, NW_RESIZE_CURSOR, S_RESIZE_CURSOR, SE_RESIZE_CURSOR, SW_RESIZE_CURSOR, TEXT_CURSOR, W_RESIZE_CURSOR, WAIT_CURSOR

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface javax.swing.WindowConstants

DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, HIDE_ON_CLOSE

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

Constructors

Constructor and Description
DoseUtility(java.lang.String title)

Method Summary

Modifier and Type	Method and Description
protected void	activateStorageSCP() Start DICOM storage listener for populating source database.
protected void	activateTemporaryDatabases() Start local database.
protected java.util.Vector<java.lang.String>	deidentifyFiles(java.util.Vector<java.lang.String> paths)
protected java.util.Vector	extractRadiationDoseSRFiles(java.util.Vector candidatePaths)
static java.util.ArrayList<QueryTreeRecord>	findCTSeriesAndRelatedRecordsInQueryTree(QueryTreeRecord record, java.util.ArrayList<QueryTreeRecord> records)
static java.util.ArrayList<QueryTreeRecord>	findDoseSeriesRecordsInQueryTree(QueryTreeRecord record, java.util.ArrayList<QueryTreeRecord> records)
protected void	generateDoseReportInformation(DatabaseTreeRecord[] databaseSelections, javax.swing.JEditorPane reportPane, java.lang.StringBuffer textBuffer, boolean doHTML, MessageLogger logger, SafeProgressBarUpdaterThread progressBarUpdater, int done, int maximum)
protected void	generateDoseReportInformation(DatabaseTreeRecord databaseSelection, javax.swing.JEditorPane reportPane, java.lang.StringBuffer textBuffer, boolean doHTML, MessageLogger logger, SafeProgressBarUpdaterThread progressBarUpdater, int done, int maximum)
protected void	generateDoseSR(DatabaseInformationModel srcDatabase, DatabaseTreeRecord[] databaseSelections, MessageLogger logger, SafeProgressBarUpdaterThread progressBarUpdater, int done, int maximum)
protected void	generateDoseSR(DatabaseInformationModel srcDatabase, DatabaseTreeRecord databaseSelection, MessageLogger logger, SafeProgressBarUpdaterThread progressBarUpdater, int done, int maximum)
protected java.util.Vector	getCurrentSourceFilePathSelections()
protected static java.lang.String	getOriginDescriptionForLog(CTDose ctDose, DatabaseInformationModel srcDatabase)
static java.lang.String	getQueryRetrieveAEFromIdentifier(AttributeList identifier, QueryInformationModel queryInformationModel)
static java.lang.String	getQueryRetrieveLevel(AttributeList identifier, Attribute uniqueKey)
protected static java.lang.String	getSRDescriptionForLog(AttributeList list)
protected static void	importFileIntoDatabase(DatabaseInformationModel database, java.lang.String dicomFileName, java.lang.String fileRefererenceType)
static void	main(java.lang.String[] arg) The method to invoke the application.
protected void	performRetrieve(AttributeList uniqueKeys, java.lang.String selectionLevel, java.lang.String retrieveAE)
protected void	purgeFilesAndDatabaseInformation(DatabaseTreeRecord[] databaseSelections, MessageLogger logger, SafeProgressBarUpdaterThread progressBarUpdater, int done, int maximum)
protected void	purgeFilesAndDatabaseInformation(DatabaseTreeRecord databaseSelection, MessageLogger logger, SafeProgressBarUpdaterThread progressBarUpdater, int done, int maximum)
static void	recurseThroughChildrenGatheringFileNamesOfDoseFiles(DatabaseTreeRecord r, java.util.Vector names, boolean onlyDoseFiles, java.lang.String manufacturer) Recursively process the specified DatabaseTreeRecord and all its children finding file paths of possible dose-related files (not the reconstructed image files) at the instance level.
static void	recurseThroughChildrenGatheringFileNamesOfSRFiles(DatabaseTreeRecord r, java.util.Vector names) Recursively process the specified DatabaseTreeRecord and all its children finding file paths of SR files at the instance level.
protected void	setCurrentRemoteQueryInformationModel(java.lang.String remoteAEForQuery)

Methods inherited from class com.pixelmed.display.ApplicationFrame

createGUI, getApplicationPropertyFileName, getBooleanPropertyOrDefaultAndAddIt, getBooleanPropertyOrDefaultAndAddIt, getBuildDate, getIntegerPropertyOrDefaultAndAddIt, getIntegerPropertyOrDefaultAndAddIt, getProperties, getPropertyInsistently, getPropertyInsistently, getPropertyOrDefaultAndAddIt, getPropertyOrDefaultAndAddIt, getReleaseString, getStatusBar, loadProperties, localizeJOptionPane, makePathToFileInUsersHomeDirectory, setApplicationPropertyFileName, setBackgroundForGUI, setInternationalizedFontsForGUI, setPreferredLookAndFeelForPlatform, storeProperties, takeSnapShot

Methods inherited from class javax.swing.JFrame

addImpl, createRootPane, frameInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setIconImage, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

Methods inherited from class java.awt.Frame

addNotify, getCursorType, getExtendedState, getFrames, getIconImage, getMaximizedBounds, getMenuBar, getState, getTitle, isResizable, isUndecorated, remove, removeNotify, setBackground, setCursor, setExtendedState, setMaximizedBounds, setMenuBar, setOpacity, setResizable, setShape, setState, setTitle, setUndecorated

Methods inherited from class java.awt.Window

addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, hide, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, setVisible, show, toBack, toFront

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.awt.MenuContainer

getFont, postEvent

Field Detail

caseSensitiveCodeMeaningValidationCheckBox

protected javax.swing.JCheckBox caseSensitiveCodeMeaningValidationCheckBox

caseSensitiveCodeMeaningValidationLabelText

protected static java.lang.String caseSensitiveCodeMeaningValidationLabelText

configureButtonLabel

protected static java.lang.String configureButtonLabel

configureButtonToolTipText

protected static java.lang.String configureButtonToolTipText

currentDatabaseTreeRecordSelections

protected DatabaseTreeRecord[] currentDatabaseTreeRecordSelections

currentRemoteQueryInformationModel

protected QueryInformationModel currentRemoteQueryInformationModel

currentRemoteQueryTreeBrowser

protected QueryTreeBrowser currentRemoteQueryTreeBrowser

cursorChanger

protected SafeCursorChanger cursorChanger

deidentifyWhenSendingToRegistryCheckBox

protected javax.swing.JCheckBox deidentifyWhenSendingToRegistryCheckBox

deidentifyWhenSendingToRegistryLabelText

protected static java.lang.String deidentifyWhenSendingToRegistryLabelText

ftpApplicationProperties

protected FTPApplicationProperties ftpApplicationProperties

ftpRemoteHostInformation

protected FTPRemoteHostInformation ftpRemoteHostInformation

importButtonLabel

protected static java.lang.String importButtonLabel

importButtonToolTipText

protected static java.lang.String importButtonToolTipText

importDirectoryPath

protected java.lang.String importDirectoryPath

localDatabaseName

protected static java.lang.String localDatabaseName

localDatabaseServerName

protected static java.lang.String localDatabaseServerName

logButtonLabel

protected static java.lang.String logButtonLabel

logButtonToolTipText

protected static java.lang.String logButtonToolTipText

logger

protected MessageLogger logger

loggerDialogHeightWanted

protected static int loggerDialogHeightWanted

loggertDialogWidthWanted

protected static int loggertDialogWidthWanted

loggerTitleMessage

protected static java.lang.String loggerTitleMessage

makeSRButtonLabel

protected static java.lang.String makeSRButtonLabel

makeSRButtonToolTipText

protected static java.lang.String makeSRButtonToolTipText

networkApplicationInformation

protected NetworkApplicationInformation networkApplicationInformation

networkApplicationProperties

protected NetworkApplicationProperties networkApplicationProperties

ourCalledAETitle

protected java.lang.String ourCalledAETitle

processOnlyDoseSeriesRecordCheckBox

protected javax.swing.JCheckBox processOnlyDoseSeriesRecordCheckBox

processOnlyDoseSeriesRecordLabelText

protected static java.lang.String processOnlyDoseSeriesRecordLabelText

progressBarUpdater

protected SafeProgressBarUpdaterThread progressBarUpdater

propertiesFileName

protected static java.lang.String propertiesFileName

propertyName_CurrentlySelectedDoseRegistry

protected static java.lang.String propertyName_CurrentlySelectedDoseRegistry

propertyName_DicomCurrentlySelectedQueryTargetAE

protected static java.lang.String propertyName_DicomCurrentlySelectedQueryTargetAE

propertyName_DicomCurrentlySelectedStorageTargetAE

protected static java.lang.String propertyName_DicomCurrentlySelectedStorageTargetAE

purgeButtonLabel

protected static java.lang.String purgeButtonLabel

purgeButtonToolTipText

protected static java.lang.String purgeButtonToolTipText

queryButtonLabel

protected static java.lang.String queryButtonLabel

queryButtonToolTipText

protected static java.lang.String queryButtonToolTipText

queryFilterPatientIDTextField

protected javax.swing.JTextField queryFilterPatientIDTextField

queryFilterPatientNameTextField

protected javax.swing.JTextField queryFilterPatientNameTextField

queryFilterStudyDateTextField

protected javax.swing.JTextField queryFilterStudyDateTextField

queryIntroductionLabelText

protected static java.lang.String queryIntroductionLabelText

queryPatientIDLabelText

protected static java.lang.String queryPatientIDLabelText

queryPatientIDToolTipText

protected static java.lang.String queryPatientIDToolTipText

queryPatientNameLabelText

protected static java.lang.String queryPatientNameLabelText

queryPatientNameToolTipText

protected static java.lang.String queryPatientNameToolTipText

queryStudyDateLabelText

protected static java.lang.String queryStudyDateLabelText

queryStudyDateToolTipText

protected static java.lang.String queryStudyDateToolTipText

registryButtonLabel

protected static java.lang.String registryButtonLabel

registryButtonToolTipText

protected static java.lang.String registryButtonToolTipText

remoteQueryRetrievePanel

protected javax.swing.JPanel remoteQueryRetrievePanel

reportButtonLabel

protected static java.lang.String reportButtonLabel

reportButtonToolTipText

protected static java.lang.String reportButtonToolTipText

reportDialogHeightWanted

protected static int reportDialogHeightWanted

reportDialogWidthWanted

protected static int reportDialogWidthWanted

reportTabularLayoutCheckBox

protected javax.swing.JCheckBox reportTabularLayoutCheckBox

reportTabularLayoutLabelText

protected static java.lang.String reportTabularLayoutLabelText

reportTitleMessage

protected static java.lang.String reportTitleMessage

retrieveButtonLabel

protected static java.lang.String retrieveButtonLabel

retrieveButtonToolTipText

protected static java.lang.String retrieveButtonToolTipText

retrieveOnlyDoseSeriesRecordCheckBox

protected javax.swing.JCheckBox retrieveOnlyDoseSeriesRecordCheckBox

retrieveOnlyDoseSeriesRecordLabelText

protected static java.lang.String retrieveOnlyDoseSeriesRecordLabelText

savedImagesFolder

protected java.io.File savedImagesFolder

sendButtonLabel

protected static java.lang.String sendButtonLabel

sendButtonToolTipText

protected static java.lang.String sendButtonToolTipText

showDetailedLogCheckBox

protected javax.swing.JCheckBox showDetailedLogCheckBox

showDetailedLogLabelText

protected static java.lang.String showDetailedLogLabelText

showOnlyDoseSummaryCheckBox

protected javax.swing.JCheckBox showOnlyDoseSummaryCheckBox

showOnlyDoseSummaryLabelText

protected static java.lang.String showOnlyDoseSummaryLabelText

srcDatabase

protected DatabaseInformationModel srcDatabase

srcDatabasePanel

protected javax.swing.JPanel srcDatabasePanel

storageSOPClassSCPDispatcher

protected StorageSOPClassSCPDispatcher storageSOPClassSCPDispatcher

textFieldLengthForQueryPatientID

protected static int textFieldLengthForQueryPatientID

textFieldLengthForQueryPatientName

protected static int textFieldLengthForQueryPatientName

textFieldLengthForQueryStudyDate

protected static int textFieldLengthForQueryStudyDate

validateButtonLabel

protected static java.lang.String validateButtonLabel

validateButtonToolTipText

protected static java.lang.String validateButtonToolTipText

validator

protected static DicomSRValidator validator

validatorFrameHeightWanted

protected static int validatorFrameHeightWanted

validatorFrameWidthWanted

protected static int validatorFrameWidthWanted

viewButtonLabel

protected static java.lang.String viewButtonLabel

viewButtonToolTipText

protected static java.lang.String viewButtonToolTipText

viewerFrameHeightWanted

protected static int viewerFrameHeightWanted

viewerFrameWidthWanted

protected static int viewerFrameWidthWanted

Constructor Detail

DoseUtility

public DoseUtility(java.lang.String title)
            throws DicomException,
                   java.io.IOException

Throws:

DicomException

java.io.IOException

Method Detail

activateStorageSCP

protected void activateStorageSCP()
                           throws DicomException,
                                  java.io.IOException

Start DICOM storage listener for populating source database.

Throws:

DicomException

java.io.IOException

activateTemporaryDatabases

protected void activateTemporaryDatabases()
                                   throws DicomException

Start local database.

Will not persist when the application is closed, so in memory database is used and instances live in the temporary filesystem.

Throws:

DicomException

deidentifyFiles

protected java.util.Vector<java.lang.String> deidentifyFiles(java.util.Vector<java.lang.String> paths)
                                                      throws DicomException,
                                                             java.io.IOException

Throws:

DicomException

java.io.IOException

extractRadiationDoseSRFiles

protected java.util.Vector extractRadiationDoseSRFiles(java.util.Vector candidatePaths)

findCTSeriesAndRelatedRecordsInQueryTree

public static java.util.ArrayList<QueryTreeRecord> findCTSeriesAndRelatedRecordsInQueryTree(QueryTreeRecord record,
                                                                                            java.util.ArrayList<QueryTreeRecord> records)

findDoseSeriesRecordsInQueryTree

public static java.util.ArrayList<QueryTreeRecord> findDoseSeriesRecordsInQueryTree(QueryTreeRecord record,
                                                                                    java.util.ArrayList<QueryTreeRecord> records)

generateDoseReportInformation

protected void generateDoseReportInformation(DatabaseTreeRecord[] databaseSelections,
                                             javax.swing.JEditorPane reportPane,
                                             java.lang.StringBuffer textBuffer,
                                             boolean doHTML,
                                             MessageLogger logger,
                                             SafeProgressBarUpdaterThread progressBarUpdater,
                                             int done,
                                             int maximum)
                                      throws DicomException,
                                             java.io.IOException

Throws:

DicomException

java.io.IOException

generateDoseReportInformation

protected void generateDoseReportInformation(DatabaseTreeRecord databaseSelection,
                                             javax.swing.JEditorPane reportPane,
                                             java.lang.StringBuffer textBuffer,
                                             boolean doHTML,
                                             MessageLogger logger,
                                             SafeProgressBarUpdaterThread progressBarUpdater,
                                             int done,
                                             int maximum)
                                      throws DicomException,
                                             java.io.IOException

Throws:

DicomException

java.io.IOException

generateDoseSR

protected void generateDoseSR(DatabaseInformationModel srcDatabase,
                              DatabaseTreeRecord[] databaseSelections,
                              MessageLogger logger,
                              SafeProgressBarUpdaterThread progressBarUpdater,
                              int done,
                              int maximum)
                       throws DicomException,
                              java.io.IOException

Throws:

DicomException

java.io.IOException

generateDoseSR

protected void generateDoseSR(DatabaseInformationModel srcDatabase,
                              DatabaseTreeRecord databaseSelection,
                              MessageLogger logger,
                              SafeProgressBarUpdaterThread progressBarUpdater,
                              int done,
                              int maximum)
                       throws DicomException,
                              java.io.IOException

Throws:

DicomException

java.io.IOException

getCurrentSourceFilePathSelections

protected java.util.Vector getCurrentSourceFilePathSelections()

getOriginDescriptionForLog

protected static java.lang.String getOriginDescriptionForLog(CTDose ctDose,
                                                             DatabaseInformationModel srcDatabase)
                                                      throws DicomException

Throws:

DicomException

getQueryRetrieveAEFromIdentifier

public static java.lang.String getQueryRetrieveAEFromIdentifier(AttributeList identifier,
                                                                QueryInformationModel queryInformationModel)

getQueryRetrieveLevel

public static java.lang.String getQueryRetrieveLevel(AttributeList identifier,
                                                     Attribute uniqueKey)

getSRDescriptionForLog

protected static java.lang.String getSRDescriptionForLog(AttributeList list)

importFileIntoDatabase

protected static void importFileIntoDatabase(DatabaseInformationModel database,
                                             java.lang.String dicomFileName,
                                             java.lang.String fileRefererenceType)
                                      throws java.io.FileNotFoundException,
                                             java.io.IOException,
                                             DicomException

Throws:

java.io.FileNotFoundException

java.io.IOException

DicomException

main

public static void main(java.lang.String[] arg)

The method to invoke the application.

Parameters:

arg - none

performRetrieve

protected void performRetrieve(AttributeList uniqueKeys,
                               java.lang.String selectionLevel,
                               java.lang.String retrieveAE)

purgeFilesAndDatabaseInformation

protected void purgeFilesAndDatabaseInformation(DatabaseTreeRecord[] databaseSelections,
                                                MessageLogger logger,
                                                SafeProgressBarUpdaterThread progressBarUpdater,
                                                int done,
                                                int maximum)
                                         throws DicomException,
                                                java.io.IOException

Throws:

DicomException

java.io.IOException

purgeFilesAndDatabaseInformation

protected void purgeFilesAndDatabaseInformation(DatabaseTreeRecord databaseSelection,
                                                MessageLogger logger,
                                                SafeProgressBarUpdaterThread progressBarUpdater,
                                                int done,
                                                int maximum)
                                         throws DicomException,
                                                java.io.IOException

Throws:

DicomException

java.io.IOException

recurseThroughChildrenGatheringFileNamesOfDoseFiles

public static void recurseThroughChildrenGatheringFileNamesOfDoseFiles(DatabaseTreeRecord r,
                                                                       java.util.Vector names,
                                                                       boolean onlyDoseFiles,
                                                                       java.lang.String manufacturer)

Recursively process the specified DatabaseTreeRecord and all its children finding file paths of possible dose-related files (not the reconstructed image files) at the instance level.

Based on the method in DatabaseTreeBrowser, modified to filter by database record type.

Parameters:

r - the current DatabaseTreeRecord to process

names - the file names (paths) to add to

onlyDoseFiles - if true, only process dose-related files (not the reconstructed image files)

manufacturer - passed from series level down to instance

recurseThroughChildrenGatheringFileNamesOfSRFiles

public static void recurseThroughChildrenGatheringFileNamesOfSRFiles(DatabaseTreeRecord r,
                                                                     java.util.Vector names)

Recursively process the specified DatabaseTreeRecord and all its children finding file paths of SR files at the instance level.

Based on the method in DatabaseTreeBrowser, modified to filter by database record type.

Parameters:

r - the current DatabaseTreeRecord to process

names - the file names (paths) to add to

setCurrentRemoteQueryInformationModel

protected void setCurrentRemoteQueryInformationModel(java.lang.String remoteAEForQuery)