Index

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

A

ABBREVPHOTO - Static variable in class com.pixelmed.display.DemographicAndTechniqueAnnotations
abort() - Method in class com.pixelmed.network.Association: Send an A-ABORT-RQ.
absoluteRange - Variable in class com.pixelmed.dose.ScanRange
absoluteRangeAsDouble - Variable in class com.pixelmed.dose.ScanRange
AbstractSyntaxSelectionPolicy - Interface in com.pixelmed.network: Implementations of this interface accept or reject Presentation Contexts from a list based on their Abstract Syntax.
abstractSyntaxSelectionPolicy - Variable in class com.pixelmed.network.AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy
abstractSyntaxSelectionPolicy - Variable in class com.pixelmed.network.AnyExplicitStorePresentationContextSelectionPolicy
abstractSyntaxSelectionPolicy - Variable in class com.pixelmed.network.UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy
abstractSyntaxSelectionPolicy - Variable in class com.pixelmed.network.UnencapsulatedExplicitStorePresentationContextSelectionPolicy
accept(File) - Method in class com.pixelmed.convert.ConvertAmicasJPEG2000FilesetToDicom.OnlyDirectoriesFileFilter
accept(File, String) - Method in class com.pixelmed.convert.ConvertAmicasJPEG2000FilesetToDicom.OnlySuffixFilenameFilter
accept(File, String) - Method in class com.pixelmed.utils.FilenameFilterByCaseInsensitiveSuffix
acceptAnyTransferSyntax - Variable in class com.pixelmed.apps.MergeConcatenationInstances.OurMediaImporter
acceptAnyTransferSyntaxCheckBox - Variable in class com.pixelmed.display.DicomCleaner
acceptAnyTransferSyntaxLabelText - Static variable in class com.pixelmed.test.TestCleanerReceiveAndClean
acceptorMaximumLengthReceivedField - Variable in class com.pixelmed.network.NetworkApplicationConfigurationDialog
acceptorSocketReceiveBufferSizeField - Variable in class com.pixelmed.network.NetworkApplicationConfigurationDialog
acceptorSocketSendBufferSizeField - Variable in class com.pixelmed.network.NetworkApplicationConfigurationDialog
AccessionNumber - Static variable in class com.pixelmed.dicom.TagFromName
accessionNumberCounter - Static variable in class com.pixelmed.apps.MultiModalitySimulator
AcquisitionContextSequence - Static variable in class com.pixelmed.dicom.TagFromName
AcquisitionContextSRStorage - Static variable in class com.pixelmed.dicom.SOPClass
AcquisitionContrast - Static variable in class com.pixelmed.dicom.TagFromName
AcquisitionDate - Static variable in class com.pixelmed.dicom.TagFromName
AcquisitionDateTime - Static variable in class com.pixelmed.dicom.TagFromName
AcquisitionDuration - Static variable in class com.pixelmed.dicom.TagFromName
AcquisitionNumber - Static variable in class com.pixelmed.dicom.TagFromName
acquisitionParameters - Variable in class com.pixelmed.dose.CTDoseAcquisition
acquisitionProtocol - Variable in class com.pixelmed.dose.CTAcquisitionParameters
acquisitions - Variable in class com.pixelmed.dose.CTDose
AcquisitionTime - Static variable in class com.pixelmed.dicom.TagFromName
AcquisitionTimeSynchronized - Static variable in class com.pixelmed.dicom.TagFromName
AcquisitionType - Static variable in class com.pixelmed.dicom.TagFromName
AcquisitionUID - Static variable in class com.pixelmed.dicom.TagFromName
ACR - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.ConfigureActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.ImportActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.LogActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.MakeSRActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.PurgeActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.QueryActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.RegistryActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.ReportActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.RetrieveActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.SendActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.ValidateActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DoseUtility.ViewActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DownloadOrTransmit.ConfigureActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DownloadOrTransmit.ExportActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DownloadOrTransmit.FtpSendActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DownloadOrTransmit.ImportActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DownloadOrTransmit.LogActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DownloadOrTransmit.PurgeActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DownloadOrTransmit.QueryActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DownloadOrTransmit.RetrieveActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DownloadOrTransmit.SendActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.apps.DownloadOrTransmit.ViewActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DialogMessageLogger.ClearActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.BlackoutActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.CancelActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.CleanActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.ConfigureActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.DefaultReplacementActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.DefaultYearActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.EarliestYearActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.ExportActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.ImportActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.LogActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.PurgeActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.QueryActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.RandomReplacementActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.RandomYearActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.RetrieveActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomCleaner.SendActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomImageBlackout.ApplyActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomImageBlackout.ApplySaveAllActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomImageBlackout.CancelActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomImageBlackout.NextActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomImageBlackout.PreviousActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomImageBlackout.SaveActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.display.DicomImageViewer.ImportFromSelectionToDatabaseActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog.AddRemoteHostActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog.DoneActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog.EditRemoteHostActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog.RemoveRemoteHostActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.network.NetworkApplicationConfigurationDialog.AddRemoteAEActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.network.NetworkApplicationConfigurationDialog.DoneActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.network.NetworkApplicationConfigurationDialog.EditRemoteAEActionListener
actionPerformed(ActionEvent) - Method in class com.pixelmed.network.NetworkApplicationConfigurationDialog.RemoveRemoteAEActionListener
activateDiscovery(int) - Method in class com.pixelmed.network.NetworkApplicationProperties.OurNetworkConfigurationSource
activateDiscovery(int) - Method in class com.pixelmed.network.NetworkConfigurationFromLDAP
activateDiscovery(int) - Method in class com.pixelmed.network.NetworkConfigurationFromMulticastDNS: Start DNS Self-Discovery, if possible.
activateDiscovery() - Method in class com.pixelmed.network.NetworkConfigurationSource: Start discovery of network configuration, if possible.
activateDiscovery(int) - Method in class com.pixelmed.network.NetworkConfigurationSource: Start discovery of network configuration, if possible.
activateDumper() - Method in class com.pixelmed.network.NetworkConfigurationSource: Start dumping current configuration information at regular intervals.
activateDumper(int) - Method in class com.pixelmed.network.NetworkConfigurationSource: Start dumping current configuration information at specified intervals.
activateStorageSCP() - Method in class com.pixelmed.apps.DoseUtility: Start DICOM storage listener for populating source database.
activateStorageSCP() - Method in class com.pixelmed.apps.DownloadOrTransmit: Start DICOM storage listener for populating source database.
activateStorageSCP() - Method in class com.pixelmed.apps.InstanceReceiver: Start or restart DICOM storage listener.
activateStorageSCP() - Method in class com.pixelmed.apps.StudyReceiver: Start or restart DICOM storage listener.
activateStorageSCP() - Method in class com.pixelmed.display.DicomCleaner: Start DICOM storage listener for populating source database.
activateTemporaryDatabases() - Method in class com.pixelmed.apps.DoseUtility: Start local database.
activateTemporaryDatabases() - Method in class com.pixelmed.apps.DownloadOrTransmit: Start local database.
activateTemporaryDatabases() - Method in class com.pixelmed.display.DicomCleaner: Start two databases, one for the "source" instances and one for the "target" instances.
ACTIVEAREA - Static variable in class com.pixelmed.convert.TIFFTags
activeSuperimposedImagesAppliedToUnderlyingImage - Variable in class com.pixelmed.display.SingleImagePanel
ActualFrameDuration - Static variable in class com.pixelmed.dicom.TagFromName
actuallyPaintComponent(Graphics, BufferedImage, Rectangle, Rectangle) - Method in class com.pixelmed.display.PlotGraph: Draw the data onto the supplied graphic with the specified background.
add(String) - Method in class com.pixelmed.dicom.SetOfDicomFiles: Add a DICOM file by reading its metaheader, +/- entire attribute list, as necessary.
add(File) - Method in class com.pixelmed.dicom.SetOfDicomFiles: Add a DICOM file by reading its metaheader, +/- entire attribute list, as necessary.
add(String, boolean) - Method in class com.pixelmed.dicom.SetOfDicomFiles: Add a DICOM file by reading its metaheader, +/- entire attribute list, as necessary.
add(String, boolean, boolean) - Method in class com.pixelmed.dicom.SetOfDicomFiles: Add a DICOM file by reading its metaheader, +/- entire attribute list, as necessary.
add(String, String, String, String) - Method in class com.pixelmed.dicom.SetOfDicomFiles: Add a DICOM file with the specified attributes.
add(String) - Method in class com.pixelmed.display.IconListBrowser: Add an annotated icon of a DICOM image.
add(String) - Method in class com.pixelmed.dose.CTIrradiationEventDataFromImages
add(File) - Method in class com.pixelmed.dose.CTIrradiationEventDataFromImages
add(String, FTPRemoteHost) - Method in class com.pixelmed.ftp.FTPRemoteHostInformation: Add a new host.
add(String, String, String, String, String, FTPSecurityType) - Method in class com.pixelmed.ftp.FTPRemoteHostInformation: Add a new remote FTP host.
add(String, ApplicationEntity) - Method in class com.pixelmed.network.NetworkApplicationInformation: Add a new AE.
add(String, String, String, int, String, String) - Method in class com.pixelmed.network.NetworkApplicationInformation: Add a new AE.
ADD_AS_NO_IF_CHANGED - Static variable in class com.pixelmed.display.DicomImageBlackout.BurnedInAnnotationFlagAction: Always remove the Burned in Annotation attribute when the file is saved, only replacing it and using a value of NO when regions have been blacked out.
ADD_AS_NO_IF_SAVED - Static variable in class com.pixelmed.display.DicomImageBlackout.BurnedInAnnotationFlagAction: Always remove the Burned in Annotation attribute when the file is saved, always replacing it with a value of NO, regardless of whether when regions have been blacked out, such as when visual inspection confirms that there is no burned in annotation.
addAcquisition(CTDoseAcquisition) - Method in class com.pixelmed.dose.CTDose
addAdditionalKeyStrokeActions() - Method in class com.pixelmed.utils.JTreeWithAdditionalKeyStrokeActions
addAgeDerivedFromBirthDateAndStudyRelatedDate(AttributeList) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes: Add the Patient's Age derived from the Patient's Birth Date and study-related date.
addAll(Properties) - Method in class com.pixelmed.network.NetworkApplicationInformation: Extract the DICOM network properties from the supplied properties.
addAll(NetworkApplicationInformation) - Method in class com.pixelmed.network.NetworkApplicationInformation: Add all the entries in the supplied map except any that are already present.
addAllAcceptableAttributesToSetAndValuesToMap(TreeSet, AttributeList, HashMap, String) - Method in class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModel: Extract from the attribute list all the attributes and values to be included in the table model.
addAllAcceptableAttributesToSetAndValuesToMap(TreeSet, AttributeList, HashMap) - Method in class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModel: Extract from the attribute list all the attributes and values to be included in the table model.
addAllAcceptableAttributesWithinSequenceAttributesToSetAndValuesToMap(TreeSet, AttributeList, HashMap) - Method in class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModel: Extract from the attribute list all attributes within sequence attributes, and their values to be included in the table model.
addAllAcceptableAttributesWithinSequenceAttributesToSetAndValuesToMapForAllFrames(TreeSet, SequenceAttribute, HashMap) - Method in class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModel: Extract from the Per-frame Functional Groups Sequence all attributes within frame items and their values to be included in the table model.
addAppropriateSegmentedPropertyCategoryCodeSequence(AttributeList, IndexedLabelMapToSegmentation.LabelInformation) - Method in class com.pixelmed.convert.IndexedLabelMapToSegmentation
addAttributeListFromDicomFileToDirectory(AttributeList, String) - Method in class com.pixelmed.dicom.DicomDirectory: Add an instance described by a list of attributes to this directory.
addChild(DatabaseTreeRecord) - Method in class com.pixelmed.database.DatabaseTreeRecord: Add a child to this nodes sorted collection of children.
addChild(AttributeTreeRecord) - Method in class com.pixelmed.dicom.AttributeTreeRecord: Add a child node to the current node, keeping the children sorted.
addChild(ContentItem) - Method in class com.pixelmed.dicom.ContentItem: Add a child to this content item.
addChild(DicomDirectoryRecord) - Method in class com.pixelmed.dicom.DicomDirectoryRecord
addChild(QueryTreeRecord) - Method in class com.pixelmed.query.QueryTreeRecord: Add a child to this nodes sorted collection of children.
addClinicalTrialsAttributes(AttributeList, boolean, String, String, String, String, String, String, String, String, String, String) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes: Add the attributes of the Clinical Trials Patient, Study and Series Modules, to a list of attributes.
addCodedSequenceItemPropertyFromBusinessName(JsonObject, AttributeList, AttributeTag, String) - Method in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
addContributingEquipmentCheckBox - Variable in class com.pixelmed.display.DicomCleaner
addContributingEquipmentLabelText - Static variable in class com.pixelmed.test.TestCleanerReceiveAndClean
addContributingEquipmentSequence(AttributeList, String, String, String, String, String, String, String, String) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes: Add the attributes of the Contributing Equipment Sequence to a list of attributes.
addContributingEquipmentSequence(AttributeList, boolean, CodedSequenceItem, String, String, String, String, String, String, String, String, String) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes: Add the attributes of the Contributing Equipment Sequence to a list of attributes.
addContributingEquipmentSequence(AttributeList, boolean, CodedSequenceItem, String, String, String, String, String, String, String, String, String, String) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes: Add the attributes of the Contributing Equipment Sequence to a list of attributes.
addContributingEquipmentSequence(AttributeList, boolean, CodedSequenceItem, String, String, String, String, String, String, String, String, String, String, String[], PersonIdentification[]) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes: Add the attributes of the Contributing Equipment Sequence to a list of attributes.
addContributingEquipmentSequence(AttributeList, boolean, CodedSequenceItem, String, String, String, CodedSequenceItem, String, String, String, String, String, String, String, String[], PersonIdentification[]) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes: Add the attributes of the Contributing Equipment Sequence to a list of attributes.
addContributingEquipmentSequence(AttributeList) - Method in class com.pixelmed.dicom.ImageLibrary
addDiagonalCross(Vector, int, int, int, int) - Static method in class com.pixelmed.display.DrawingUtilities: Draw a diagonal cross at a specified location with a gap around the center
addDicomAttributeFromXmlAttribute(AttributeList, AttributeTag, String, NamedNodeMap, int, String) - Method in class com.pixelmed.convert.ConvertAmicasJPEG2000FilesetToDicom
addDicomDirectoryCheckBox - Variable in class com.pixelmed.apps.DownloadOrTransmit
addDicomDirectoryLabelText - Static variable in class com.pixelmed.apps.DownloadOrTransmit
addDicomDirectoryToolTipText - Static variable in class com.pixelmed.apps.DownloadOrTransmit
addDicomFiles(String[]) - Method in class com.pixelmed.display.IconListBrowser: Add a set of DICOM image files.
addFileMetaInformation(AttributeList, String, String, String, String) - Static method in class com.pixelmed.dicom.FileMetaInformation: Add the file meta information attributes to an existing list, using only the parameters supplied.
addFileMetaInformation(AttributeList, String, String) - Static method in class com.pixelmed.dicom.FileMetaInformation: Add the file meta information attributes to an existing list, extracting the known UIDs from that list, and adding the additional parameters supplied.
addFileToDelete(String) - Static method in class com.pixelmed.utils.FileReaper
addFrame(Attribute) - Method in class com.pixelmed.dicom.MultiFramePixelData
AddHierarchicalEvidenceSequencetoStructuredReports - Class in com.pixelmed.apps: A class to process multiple SR files and their referenced instances (like Images, Presentation States and Segmentations) and build Hierarchical SOP Instance Reference Macros with which to (re-)populate CurrentRequestedProcedureEvidenceSequence.
AddHierarchicalEvidenceSequencetoStructuredReports(String[], String) - Constructor for class com.pixelmed.apps.AddHierarchicalEvidenceSequencetoStructuredReports: Copy only the most recent SR files and their references.
AddHierarchicalEvidenceSequencetoStructuredReports.OurMediaImporter - Class in com.pixelmed.apps
addImage(AttributeList) - Method in class com.pixelmed.dicom.ImageLibrary: Create and add an SR Image Library entry derived from a DICOM image instance.
addItem(SequenceItem) - Method in class com.pixelmed.dicom.SequenceAttribute: Add an item to the sequence (after any existing items).
addItem(AttributeList) - Method in class com.pixelmed.dicom.SequenceAttribute: Add an item to the sequence (after any existing items).
addItem(AttributeList, long) - Method in class com.pixelmed.dicom.SequenceAttribute: Add an item to the sequence (after any existing items), keeping tracking of input byte offsets.
additionalIndexMapOfColumnsToTables - Variable in class com.pixelmed.database.DatabaseInformationModel
AdditionalPatientHistory - Static variable in class com.pixelmed.dicom.TagFromName
addLayoutComponent(String, Component) - Method in class com.pixelmed.display.DicomImageBlackout.CenterMaximumAfterInitialSizeLayout
addListener(Listener) - Method in class com.pixelmed.event.ApplicationEventDispatcher
addListener(Listener) - Method in interface com.pixelmed.event.EventDispatcher
addNodeOfDecimalAndHex(SCPTreeRecord, String, int) - Static method in class com.pixelmed.scpecg.Section: Add a tree node with a numeric value as decimal and hexadecimal strings.
addNodeOfDecimalWithMissingValues(SCPTreeRecord, String, int) - Static method in class com.pixelmed.scpecg.Section: Add a tree node with a numeric value as decimal string, with potentially missing values.
addNodeOfDecimalWithUndefinedOrMissingValues(SCPTreeRecord, String, int) - Static method in class com.pixelmed.scpecg.Section7: Add a tree node with a numeric value as decimal string, with potentially udnefined or missing values.
addOrReplaceIfNotEmptyOtherwiseLeaveUnchanged(AttributeList, AttributeTag) - Method in class com.pixelmed.dicom.CompositeInstanceContext
addPersonNameAsComponentsToJsonObject(JsonObjectBuilder, String, String, String, String) - Static method in class com.pixelmed.dicom.JSONRepresentationOfDicomObjectFactory
addPublicStorageSCPs() - Method in class com.pixelmed.network.NetworkApplicationInformation
AddRemoteAEActionListener() - Constructor for class com.pixelmed.network.NetworkApplicationConfigurationDialog.AddRemoteAEActionListener
AddRemoteHostActionListener() - Constructor for class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog.AddRemoteHostActionListener
addSectionHeaderToTree(SCPTreeRecord) - Method in class com.pixelmed.scpecg.Section: Get section header information to the section node in a tree for display.
addSegmentSequence(AttributeList, Set<Integer>, Map<Integer, IndexedLabelMapToSegmentation.LabelInformation>, Set<Integer>) - Method in class com.pixelmed.convert.IndexedLabelMapToSegmentation
addSegmentSequenceItem(int, SequenceAttribute, int, IndexedLabelMapToSegmentation.LabelInformation) - Method in class com.pixelmed.convert.IndexedLabelMapToSegmentation
addSegmentSequenceItem(int, SequenceAttribute, IndexedLabelMapToSegmentation.LabelInformation) - Method in class com.pixelmed.convert.IndexedLabelMapToSegmentation
addSibling(DatabaseTreeRecord) - Method in class com.pixelmed.database.DatabaseTreeRecord: Add a sibling to this node, that is add a child to this node's parent's sorted collection of children.
addSibling(AttributeTreeRecord) - Method in class com.pixelmed.dicom.AttributeTreeRecord: Add a sibling to the current node, keeping the children sorted.
addSibling(ContentItem) - Method in class com.pixelmed.dicom.ContentItem: Add a sibling to this content item (a child to the parent of this content item).
addSibling(DicomDirectoryRecord) - Method in class com.pixelmed.dicom.DicomDirectoryRecord
addSibling(QueryTreeRecord) - Method in class com.pixelmed.query.QueryTreeRecord: Add a sibling to this node, that is add a child to this node's parent's sorted collection of children.
addSingleImagePanelToMultiPanelAndEstablishLayout() - Method in class com.pixelmed.display.DicomImageBlackout
addSingleImagePanelToMultiPanelAndEstablishLayoutWithCenterMaximumAfterInitialSizeLayout() - Method in class com.pixelmed.display.DicomImageBlackout
addSource(NetworkConfigurationSource) - Method in class com.pixelmed.network.NetworkApplicationInformationFederated: Add a new source of network information.
addStack(AttributeList, Map<String, StackOfSlices>) - Static method in class com.pixelmed.dicom.MultiFrameImageFactory
addStackIfNotAlreadyPresent(AttributeList, Map<String, StackOfSlices>) - Static method in class com.pixelmed.dicom.MultiFrameImageFactory
AddTIFFOrOffsetTables - Class in com.pixelmed.convert: A class for to add make a dual-personality DICOM-TIFF file and/or add Basic or Extended Offset Tables.
AddTIFFOrOffsetTables(String, String, boolean, boolean) - Constructor for class com.pixelmed.convert.AddTIFFOrOffsetTables: Read a DICOM image input format file and create a dual-personality DICOM-TIFF file and/or add Basic or Extended Offset Tables.
addTLHCOfClippedRegionToImagePosition(AttributeList, int[]) - Method in class com.pixelmed.apps.ShrinkSegmentationToBoundingBox
addToGroups(AttributeList) - Method in class com.pixelmed.apps.MergeCompositeContext
addToHierarchicalReferencesToSOPInstances(AttributeList, Map<String, HierarchicalSOPInstanceReference>) - Static method in class com.pixelmed.dicom.HierarchicalSOPInstanceReference: Find hierarchical references to instances that may be referenced anywhere in any dataset regardless of depth of nesting.
addTransferSyntaxUID(String) - Method in class com.pixelmed.network.PresentationContext
addTreeModelListener(TreeModelListener) - Method in class com.pixelmed.database.DatabaseTreeModel
addTreeModelListener(TreeModelListener) - Method in class com.pixelmed.dicom.AttributeTree
addTreeModelListener(TreeModelListener) - Method in class com.pixelmed.dicom.DicomDirectory
addTreeModelListener(TreeModelListener) - Method in class com.pixelmed.dicom.StructuredReport
addTreeModelListener(TreeModelListener) - Method in class com.pixelmed.query.QueryTreeModel
addTreeModelListener(TreeModelListener) - Method in class com.pixelmed.scpecg.SCPTree
addType1LongStringAttribute(AttributeList, AttributeTag, String, SpecificCharacterSet) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes
addType2LongStringAttribute(AttributeList, AttributeTag, String, SpecificCharacterSet) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes
addType3DateTimeAttribute(AttributeList, AttributeTag, String) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes
addType3LongStringAttribute(AttributeList, AttributeTag, String, SpecificCharacterSet) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes
addType3ShortStringAttribute(AttributeList, AttributeTag, String, SpecificCharacterSet) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes
addType3ShortTextAttribute(AttributeList, AttributeTag, String, SpecificCharacterSet) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes
addValue(String) - Method in class com.pixelmed.dicom.Attribute: Add a(nother) String value after any existing values of this attribute.
addValue(byte) - Method in class com.pixelmed.dicom.Attribute: Add a(nother) byte value after any existing values of this attribute.
addValue(short) - Method in class com.pixelmed.dicom.Attribute: Add a(nother) short value after any existing values of this attribute.
addValue(int) - Method in class com.pixelmed.dicom.Attribute: Add a(nother) int value after any existing values of this attribute.
addValue(long) - Method in class com.pixelmed.dicom.Attribute: Add a(nother) long value after any existing values of this attribute.
addValue(float) - Method in class com.pixelmed.dicom.Attribute: Add a(nother) float value after any existing values of this attribute.
addValue(double) - Method in class com.pixelmed.dicom.Attribute: Add a(nother) double value after any existing values of this attribute.
addValue(int, int) - Method in class com.pixelmed.dicom.AttributeTagAttribute
addValue(AttributeTag) - Method in class com.pixelmed.dicom.AttributeTagAttribute
addValue(String) - Method in class com.pixelmed.dicom.AttributeTagAttribute
addValue(long) - Method in class com.pixelmed.dicom.DecimalStringAttribute
addValue(float) - Method in class com.pixelmed.dicom.DecimalStringAttribute
addValue(double) - Method in class com.pixelmed.dicom.DecimalStringAttribute
addValue(double) - Method in class com.pixelmed.dicom.FloatDoubleAttribute
addValue(float) - Method in class com.pixelmed.dicom.FloatDoubleAttribute
addValue(short) - Method in class com.pixelmed.dicom.FloatDoubleAttribute
addValue(int) - Method in class com.pixelmed.dicom.FloatDoubleAttribute
addValue(long) - Method in class com.pixelmed.dicom.FloatDoubleAttribute
addValue(String) - Method in class com.pixelmed.dicom.FloatDoubleAttribute
addValue(float) - Method in class com.pixelmed.dicom.FloatSingleAttribute
addValue(double) - Method in class com.pixelmed.dicom.FloatSingleAttribute
addValue(short) - Method in class com.pixelmed.dicom.FloatSingleAttribute
addValue(int) - Method in class com.pixelmed.dicom.FloatSingleAttribute
addValue(long) - Method in class com.pixelmed.dicom.FloatSingleAttribute
addValue(String) - Method in class com.pixelmed.dicom.FloatSingleAttribute
addValue(long) - Method in class com.pixelmed.dicom.IntegerStringAttribute
addValue(float) - Method in class com.pixelmed.dicom.IntegerStringAttribute
addValue(double) - Method in class com.pixelmed.dicom.IntegerStringAttribute
addValue(String) - Method in class com.pixelmed.dicom.OtherByteAttribute
addValue(short) - Method in class com.pixelmed.dicom.SignedLongAttribute
addValue(int) - Method in class com.pixelmed.dicom.SignedLongAttribute
addValue(long) - Method in class com.pixelmed.dicom.SignedLongAttribute
addValue(float) - Method in class com.pixelmed.dicom.SignedLongAttribute
addValue(double) - Method in class com.pixelmed.dicom.SignedLongAttribute
addValue(String) - Method in class com.pixelmed.dicom.SignedLongAttribute
addValue(short) - Method in class com.pixelmed.dicom.SignedShortAttribute
addValue(int) - Method in class com.pixelmed.dicom.SignedShortAttribute
addValue(long) - Method in class com.pixelmed.dicom.SignedShortAttribute
addValue(float) - Method in class com.pixelmed.dicom.SignedShortAttribute
addValue(double) - Method in class com.pixelmed.dicom.SignedShortAttribute
addValue(String) - Method in class com.pixelmed.dicom.SignedShortAttribute
addValue(short) - Method in class com.pixelmed.dicom.SignedVeryLongAttribute
addValue(int) - Method in class com.pixelmed.dicom.SignedVeryLongAttribute
addValue(long) - Method in class com.pixelmed.dicom.SignedVeryLongAttribute
addValue(float) - Method in class com.pixelmed.dicom.SignedVeryLongAttribute
addValue(double) - Method in class com.pixelmed.dicom.SignedVeryLongAttribute
addValue(String) - Method in class com.pixelmed.dicom.SignedVeryLongAttribute
addValue(String) - Method in class com.pixelmed.dicom.StringAttribute
addValue(byte) - Method in class com.pixelmed.dicom.StringAttribute
addValue(short) - Method in class com.pixelmed.dicom.StringAttribute
addValue(int) - Method in class com.pixelmed.dicom.StringAttribute
addValue(long) - Method in class com.pixelmed.dicom.StringAttribute
addValue(float) - Method in class com.pixelmed.dicom.StringAttribute
addValue(double) - Method in class com.pixelmed.dicom.StringAttribute
addValue(String) - Method in class com.pixelmed.dicom.TextAttribute
addValue(short) - Method in class com.pixelmed.dicom.UnsignedLongAttribute
addValue(int) - Method in class com.pixelmed.dicom.UnsignedLongAttribute
addValue(long) - Method in class com.pixelmed.dicom.UnsignedLongAttribute
addValue(float) - Method in class com.pixelmed.dicom.UnsignedLongAttribute
addValue(double) - Method in class com.pixelmed.dicom.UnsignedLongAttribute
addValue(String) - Method in class com.pixelmed.dicom.UnsignedLongAttribute
addValue(short) - Method in class com.pixelmed.dicom.UnsignedShortAttribute
addValue(int) - Method in class com.pixelmed.dicom.UnsignedShortAttribute
addValue(long) - Method in class com.pixelmed.dicom.UnsignedShortAttribute
addValue(float) - Method in class com.pixelmed.dicom.UnsignedShortAttribute
addValue(double) - Method in class com.pixelmed.dicom.UnsignedShortAttribute
addValue(String) - Method in class com.pixelmed.dicom.UnsignedShortAttribute
addValue(short) - Method in class com.pixelmed.dicom.UnsignedVeryLongAttribute
addValue(int) - Method in class com.pixelmed.dicom.UnsignedVeryLongAttribute
addValue(long) - Method in class com.pixelmed.dicom.UnsignedVeryLongAttribute
addValue(float) - Method in class com.pixelmed.dicom.UnsignedVeryLongAttribute
addValue(double) - Method in class com.pixelmed.dicom.UnsignedVeryLongAttribute
addValue(String) - Method in class com.pixelmed.dicom.UnsignedVeryLongAttribute
addVerticalCross(Vector, int, int, int, int) - Static method in class com.pixelmed.display.DrawingUtilities: Draw a vertical cross at a specified location with a gap around the center
AdmissionID - Static variable in class com.pixelmed.dicom.TagFromName
AdmittingDiagnosesCodeSequence - Static variable in class com.pixelmed.dicom.TagFromName
AdmittingDiagnosesDescription - Static variable in class com.pixelmed.dicom.TagFromName
AdvancedBlendingPresentationStateStorage - Static variable in class com.pixelmed.dicom.SOPClass
AE - Static variable in class com.pixelmed.dicom.ValueRepresentation
AETGenerator(String, int) - Constructor for class com.pixelmed.network.ProbeCapability.AETGenerator
AffectedSOPClassUID - Static variable in class com.pixelmed.dicom.TagFromName
AffectedSOPInstanceUID - Static variable in class com.pixelmed.dicom.TagFromName
ageDerived - Variable in class com.pixelmed.test.TestPatientAgeWhenRemoveIdentifyingAttributes
ageEncoded - Variable in class com.pixelmed.test.TestPatientAgeWhenRemoveIdentifyingAttributes
AgeStringAttribute - Class in com.pixelmed.dicom: A concrete class specializing Attribute for Age String (AS) attributes.
AgeStringAttribute(AttributeTag) - Constructor for class com.pixelmed.dicom.AgeStringAttribute: Construct an (empty) attribute.
AgeStringAttribute(AttributeTag, long, DicomInputStream) - Constructor for class com.pixelmed.dicom.AgeStringAttribute: Read an attribute from an input stream.
AgeStringAttribute(AttributeTag, Long, DicomInputStream) - Constructor for class com.pixelmed.dicom.AgeStringAttribute: Read an attribute from an input stream.
aggregateAgesOver89CheckBox - Variable in class com.pixelmed.display.DicomCleaner
ALERT - Static variable in class com.pixelmed.utils.Syslog
alertAccumulatedCTDIvolForwardEstimate - Variable in class com.pixelmed.dose.CTDoseCheckDetails
alertAccumulatedDLPForwardEstimate - Variable in class com.pixelmed.dose.CTDoseCheckDetails
alertCTDIvolValue - Variable in class com.pixelmed.dose.CTDoseCheckDetails
alertCTDIvolValueConfigured - Variable in class com.pixelmed.dose.CTDoseCheckDetails
alertDLPValue - Variable in class com.pixelmed.dose.CTDoseCheckDetails
alertDLPValueConfigured - Variable in class com.pixelmed.dose.CTDoseCheckDetails
alertPerson - Variable in class com.pixelmed.dose.CTDoseCheckDetails
alertReasonForProceeding - Variable in class com.pixelmed.dose.CTDoseCheckDetails
ALL_ANNOTATIONS - Static variable in class com.pixelmed.display.ConsumerFormatImageMaker
allAttributesReturnedInIdentifier - Variable in class com.pixelmed.query.QueryTreeRecord
Allergies - Static variable in class com.pixelmed.dicom.TagFromName
allframes - Variable in class com.pixelmed.dicom.OtherByteAttributeMultipleCompressedFrames
allOptionalKeysSuppliedWereSupported() - Method in interface com.pixelmed.query.QueryResponseGenerator: Determine information needed to qualify pending response statuses.
allowData - Variable in class com.pixelmed.network.CompositeResponseHandler
allowDeferredReadFromFileIfNotMemoryMapped - Static variable in class com.pixelmed.display.SourceImage
allowMemoryMapping - Static variable in class com.pixelmed.display.SourceImage
allowMemoryMappingFromMultiplePerFrameFiles - Static variable in class com.pixelmed.display.SourceImage
allowRepairOfIncorrectLength() - Method in class com.pixelmed.dicom.CodeStringAttribute
allowRepairOfIncorrectLength() - Method in class com.pixelmed.dicom.DateAttribute
allowRepairOfIncorrectLength() - Method in class com.pixelmed.dicom.DateTimeAttribute
allowRepairOfIncorrectLength() - Method in class com.pixelmed.dicom.StringAttribute
allowRepairOfIncorrectLength() - Method in class com.pixelmed.dicom.TimeAttribute
allowRepairOfInvalidCharacterReplacement() - Method in class com.pixelmed.dicom.CodeStringAttribute
allowRepairOfInvalidCharacterReplacement() - Method in class com.pixelmed.dicom.DateAttribute
allowRepairOfInvalidCharacterReplacement() - Method in class com.pixelmed.dicom.DateTimeAttribute
allowRepairOfInvalidCharacterReplacement() - Method in class com.pixelmed.dicom.StringAttribute
allowRepairOfInvalidCharacterReplacement() - Method in class com.pixelmed.dicom.TimeAttribute
alreadyHaveIt(AttributeList) - Method in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
alternateContentDescription - Variable in class com.pixelmed.dicom.ColorPalette
AlternateContentDescriptionSequence - Static variable in class com.pixelmed.dicom.TagFromName
alternateContentDescriptionStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotIron
alternateContentDescriptionStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotMetalBlue
alternateContentDescriptionStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET
alternateContentDescriptionStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET20Step
alternateContentLanguageCodeMeaning - Variable in class com.pixelmed.dicom.ColorPalette
alternateContentLanguageCodeMeaningStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotIron
alternateContentLanguageCodeMeaningStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotMetalBlue
alternateContentLanguageCodeMeaningStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET
alternateContentLanguageCodeMeaningStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET20Step
alternateContentLanguageCodeValue - Variable in class com.pixelmed.dicom.ColorPalette
alternateContentLanguageCodeValueStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotIron
alternateContentLanguageCodeValueStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotMetalBlue
alternateContentLanguageCodeValueStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET
alternateContentLanguageCodeValueStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET20Step
AlternateRepresentationSequence - Static variable in class com.pixelmed.dicom.TagFromName
ALWAYS_REMOVE - Static variable in class com.pixelmed.display.DicomImageBlackout.BurnedInAnnotationFlagAction: Always remove the Burned in Annotation attribute when the file is saved, without replacing it.
AmbulatoryECGStorage - Static variable in class com.pixelmed.dicom.SOPClass
amplitudeScalingFactorInMilliVolts - Variable in class com.pixelmed.displaywave.SourceECG
ANALOGBALANCE - Static variable in class com.pixelmed.convert.TIFFTags
AnalyzeException - Exception in com.pixelmed.convert
AnalyzeException(String) - Constructor for exception com.pixelmed.convert.AnalyzeException
AnalyzeHeader - Class in com.pixelmed.convert: A class for extracting Analyze image input format headers.
AnalyzeHeader(File) - Constructor for class com.pixelmed.convert.AnalyzeHeader
AnalyzeToDicom - Class in com.pixelmed.convert: A class for converting Analyze image input format files into images of a specified or appropriate SOP Class.
AnalyzeToDicom(String, String, String, String, String, String, String) - Constructor for class com.pixelmed.convert.AnalyzeToDicom: Read an Analyze image input format files and create an image of a specified or appropriate SOP Class.
AnalyzeToDicom(String, String, String, String, String, String, String, String, String) - Constructor for class com.pixelmed.convert.AnalyzeToDicom: Read an Analyze image input format files and create an image of a specified or appropriate SOP Class.
AnatomicalOrientationType - Static variable in class com.pixelmed.dicom.TagFromName
anatomicalStructure - Variable in class com.pixelmed.dicom.ProjectionXRayImageLibrary.ProjectionXRayImageLibraryEntry
anatomicConceptEntries - Static variable in class com.pixelmed.anatproc.CTAnatomy
anatomicConceptEntries - Static variable in class com.pixelmed.anatproc.ProjectionXRayAnatomy
AnatomicRegionModifierSequence - Static variable in class com.pixelmed.dicom.TagFromName
AnatomicRegionSequence - Static variable in class com.pixelmed.dicom.TagFromName
anatomy - Variable in class com.pixelmed.dose.CTAcquisitionParameters
anatomyConcepts - Static variable in class com.pixelmed.anatproc.CTAnatomy
anatomyConcepts - Static variable in class com.pixelmed.anatproc.ProjectionXRayAnatomy
ANTIALIASSTRENGTH - Static variable in class com.pixelmed.convert.TIFFTags
AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy - Class in com.pixelmed.network: Accept only SOP Classes for storage, query or retrieval of composite instances and verification SOP Classes with any explicit transfer syntax (whether compressed or not), also rejecting implicit VR transfer syntaxes if an explicit VR transfer syntax is offered for the same abstract syntax.
AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy() - Constructor for class com.pixelmed.network.AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy
AnyExplicitStorePresentationContextSelectionPolicy - Class in com.pixelmed.network: Accept only SOP Classes for storage of composite instances and verification SOP Classes with any explicit transfer syntax (whether compressed or not), also rejecting implicit VR transfer syntaxes if an explicit VR transfer syntax is offered for the same abstract syntax.
AnyExplicitStorePresentationContextSelectionPolicy() - Constructor for class com.pixelmed.network.AnyExplicitStorePresentationContextSelectionPolicy
AnyExplicitTransferSyntaxSelectionPolicy - Class in com.pixelmed.network: Accept any explicit transfer syntax (whether compressed or not), also rejecting implicit VR transfer syntaxes if an explicit VR transfer syntax is offered for the same abstract syntax.
AnyExplicitTransferSyntaxSelectionPolicy() - Constructor for class com.pixelmed.network.AnyExplicitTransferSyntaxSelectionPolicy
appendExactOrIsNullMatch(StringBuffer, String) - Static method in class com.pixelmed.database.DatabaseInformationModel: Append a check for a match against a string value, accounting for the need to use the "IS NULL" rather than "=" expression when wanting to explciitly have NULL match NULL rather to never match.
apple.dts.samplecode.osxadapter - package apple.dts.samplecode.osxadapter
application - Variable in class com.pixelmed.test.TestCleanerReceiveAndClean
ApplicationEntity - Class in com.pixelmed.network: This class provides a description of the parameters of a known Application Entity.
ApplicationEntity(ApplicationEntity) - Constructor for class com.pixelmed.network.ApplicationEntity
ApplicationEntity(String) - Constructor for class com.pixelmed.network.ApplicationEntity
ApplicationEntity(String, PresentationAddress, String, String) - Constructor for class com.pixelmed.network.ApplicationEntity
ApplicationEntityAttribute - Class in com.pixelmed.dicom: A concrete class specializing Attribute for Application Entity (AE) attributes.
ApplicationEntityAttribute(AttributeTag) - Constructor for class com.pixelmed.dicom.ApplicationEntityAttribute: Construct an (empty) attribute.
ApplicationEntityAttribute(AttributeTag, long, DicomInputStream) - Constructor for class com.pixelmed.dicom.ApplicationEntityAttribute: Read an attribute from an input stream.
ApplicationEntityAttribute(AttributeTag, Long, DicomInputStream) - Constructor for class com.pixelmed.dicom.ApplicationEntityAttribute: Read an attribute from an input stream.
ApplicationEntityConfigurationDialog - Class in com.pixelmed.network: This class implements a dialog for users to enter DICOM AE network configuration parameters.
ApplicationEntityConfigurationDialog(Component, String, ApplicationEntity) - Constructor for class com.pixelmed.network.ApplicationEntityConfigurationDialog: Configure AE information.
ApplicationEntityConfigurationDialog(String, ApplicationEntity) - Constructor for class com.pixelmed.network.ApplicationEntityConfigurationDialog: Configure AE information.
ApplicationEntityConfigurationDialog(Component, String) - Constructor for class com.pixelmed.network.ApplicationEntityConfigurationDialog: Create new AE information.
ApplicationEntityConfigurationDialog(Component) - Constructor for class com.pixelmed.network.ApplicationEntityConfigurationDialog: Create new AE information.
ApplicationEntityConfigurationDialog() - Constructor for class com.pixelmed.network.ApplicationEntityConfigurationDialog: Create new AE information.
ApplicationEntityMap - Class in com.pixelmed.network: This class provides a list of known Application Entities, indexed by AET.
ApplicationEntityMap() - Constructor for class com.pixelmed.network.ApplicationEntityMap
ApplicationEventDispatcher - Class in com.pixelmed.event
ApplicationFrame - Class in com.pixelmed.display: This class provides the infrastructure for creating applications (which extend this class) and provides them with utilities for creating a main window with a title and default close and dispose behavior, as well as access to properties, and a window snapshot function.
ApplicationFrame() - Constructor for class com.pixelmed.display.ApplicationFrame: Construct a window with the default size and title and no property source.
ApplicationFrame(int) - Constructor for class com.pixelmed.display.ApplicationFrame: Construct a window with the default size and title and no property source.
ApplicationFrame(String) - Constructor for class com.pixelmed.display.ApplicationFrame: Construct a window with the default size, specified title and no property source.
ApplicationFrame(String, int) - Constructor for class com.pixelmed.display.ApplicationFrame: Construct a window with the default size, specified title and no property source.
ApplicationFrame(String, String) - Constructor for class com.pixelmed.display.ApplicationFrame: Construct a window with the default size, and specified title and property sources.
ApplicationFrame(String, String, int) - Constructor for class com.pixelmed.display.ApplicationFrame: Construct a window with the default size, and specified title and property sources.
ApplicationFrame(String, String, int, int) - Constructor for class com.pixelmed.display.ApplicationFrame: Construct a window with the specified size, title and property sources.
ApplicationFrame(String, String, int, int, int) - Constructor for class com.pixelmed.display.ApplicationFrame: Construct a window with the specified size, title and property sources.
ApplicationStatusChangeEventNotificationHandler() - Constructor for class com.pixelmed.display.DicomCleaner.OurDicomImageBlackout.ApplicationStatusChangeEventNotificationHandler
applyAbstractSyntaxSelectionPolicy(LinkedList, int) - Method in interface com.pixelmed.network.AbstractSyntaxSelectionPolicy: Accept or reject Abstract Syntaxes (SOP Classes).
applyAbstractSyntaxSelectionPolicy(LinkedList, int) - Method in class com.pixelmed.network.CompositeInstanceStoreAbstractSyntaxSelectionPolicy: Accept or reject Abstract Syntaxes (SOP Classes).
applyAbstractSyntaxSelectionPolicy(LinkedList, int) - Method in class com.pixelmed.network.CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy: Accept or reject Abstract Syntaxes (SOP Classes).
applyActionListener - Variable in class com.pixelmed.display.DicomImageBlackout
ApplyActionListener(DicomImageBlackout) - Constructor for class com.pixelmed.display.DicomImageBlackout.ApplyActionListener
applyExplicitTransferSyntaxPreferencePolicy(LinkedList, int) - Method in class com.pixelmed.network.TransferSyntaxSelectionPolicy: Reject Implicit VR Presentation Contexts when multiple Presentation Contexts are offered for the same Abstract Syntax, if possible.
applyICCProfileIfPresent - Variable in class com.pixelmed.display.SourceImage
applyPaddingValueRangeToLUT(byte[], int, int, int) - Static method in class com.pixelmed.display.WindowCenterAndWidth
applyPresentationContextSelectionPolicy(LinkedList, int) - Method in class com.pixelmed.network.AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy: Accept or reject Abstract Syntaxes (SOP Classes).
applyPresentationContextSelectionPolicy(LinkedList, int) - Method in class com.pixelmed.network.AnyExplicitStorePresentationContextSelectionPolicy: Accept or reject Abstract Syntaxes (SOP Classes).
applyPresentationContextSelectionPolicy(LinkedList, int) - Method in interface com.pixelmed.network.PresentationContextSelectionPolicy: Accept or reject Presentation Contexts.
applyPresentationContextSelectionPolicy(LinkedList, int) - Method in class com.pixelmed.network.UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy: Accept or reject Abstract Syntaxes (SOP Classes).
applyPresentationContextSelectionPolicy(LinkedList, int) - Method in class com.pixelmed.network.UnencapsulatedExplicitStorePresentationContextSelectionPolicy: Accept or reject Abstract Syntaxes (SOP Classes).
ApplySaveAllActionListener(DicomImageBlackout) - Constructor for class com.pixelmed.display.DicomImageBlackout.ApplySaveAllActionListener
applyShutter() - Method in class com.pixelmed.display.event.ApplyShutterChangeEvent
ApplyShutterChangeEvent - Class in com.pixelmed.display.event
ApplyShutterChangeEvent(EventContext, boolean) - Constructor for class com.pixelmed.display.event.ApplyShutterChangeEvent
applyTransferSyntaxSelectionPolicy(LinkedList, int) - Method in class com.pixelmed.network.AnyExplicitTransferSyntaxSelectionPolicy: Accept or reject Presentation Contexts, preferring Explicit over Implicit VR.
applyTransferSyntaxSelectionPolicy(LinkedList, int) - Method in class com.pixelmed.network.TransferSyntaxSelectionPolicy: Accept or reject Presentation Contexts, based on TransferSyntax.
applyTransferSyntaxSelectionPolicy(LinkedList, int) - Method in class com.pixelmed.network.UnencapsulatedExplicitTransferSyntaxSelectionPolicy: Accept or reject Presentation Contexts, preferring Explicit over Implicit VR.
applyVOILUT(BufferedImage, double, double, double, double, boolean, boolean, double, double, boolean, int, int, int, int, int, short[], int, int, int) - Static method in class com.pixelmed.display.SingleImagePanel
applyVOILUT(BufferedImage, double, double, double, double, boolean, boolean, double, double, boolean, int, int, int, int, int, short[], int, int, int) - Static method in class com.pixelmed.display.WindowCenterAndWidth
applyWindowCenterAndWidthLinear(BufferedImage, double, double, boolean, boolean, double, double, boolean, int, int) - Static method in class com.pixelmed.display.SingleImagePanel
applyWindowCenterAndWidthLinear(BufferedImage, double, double, boolean, boolean, double, double, boolean, int, int, boolean) - Static method in class com.pixelmed.display.SingleImagePanel
applyWindowCenterAndWidthLinear(BufferedImage, double, double, boolean, boolean, double, double, boolean, int) - Static method in class com.pixelmed.display.WindowCenterAndWidth
applyWindowCenterAndWidthLinear(BufferedImage, double, double, boolean, boolean, double, double, boolean, int, int) - Static method in class com.pixelmed.display.WindowCenterAndWidth
applyWindowCenterAndWidthLinear(BufferedImage, double, double, boolean, boolean, double, double, boolean, int, int, boolean) - Static method in class com.pixelmed.display.WindowCenterAndWidth
applyWindowCenterAndWidthLinearToColorImage(BufferedImage, double, double) - Static method in class com.pixelmed.display.SingleImagePanel
applyWindowCenterAndWidthLinearToColorImage(BufferedImage, double, double) - Static method in class com.pixelmed.display.WindowCenterAndWidth
applyWindowCenterAndWidthLogistic(BufferedImage, double, double, boolean, boolean, double, double, boolean, int, int) - Static method in class com.pixelmed.display.SingleImagePanel
applyWindowCenterAndWidthLogistic(BufferedImage, double, double, boolean, boolean, double, double, boolean, int) - Static method in class com.pixelmed.display.WindowCenterAndWidth
applyWindowCenterAndWidthLogistic(BufferedImage, double, double, boolean, boolean, double, double, boolean, int, int) - Static method in class com.pixelmed.display.WindowCenterAndWidth
applyWindowCenterAndWidthWithPaletteColor(BufferedImage, double, double, boolean, boolean, double, double, boolean, int, int, int, int, int, short[], short[], short[]) - Static method in class com.pixelmed.display.SingleImagePanel
applyWindowCenterAndWidthWithPaletteColor(BufferedImage, double, double, boolean, boolean, double, double, boolean, int, int, int, int, short[], short[], short[]) - Static method in class com.pixelmed.display.WindowCenterAndWidth
applyWindowCenterAndWidthWithPaletteColor(BufferedImage, double, double, boolean, boolean, double, double, boolean, int, int, int, int, int, short[], short[], short[]) - Static method in class com.pixelmed.display.WindowCenterAndWidth
areAllSlicesParallel() - Method in class com.pixelmed.geometry.GeometryOfVolume: Are all the frames in the set of frames parallel ?
areCharactersInValuesValid() - Method in class com.pixelmed.dicom.StringAttribute
areDownsampled - Variable in class com.pixelmed.dicom.CompressedFrameDecoder
AReleaseException - Exception in com.pixelmed.network
AReleaseException(String) - Constructor for exception com.pixelmed.network.AReleaseException
areLengthsOfValuesValid() - Method in class com.pixelmed.dicom.StringAttribute
areNumberedFromOneByOne - Variable in class com.pixelmed.dicom.CompressedFrameDecoder
areParallel - Variable in class com.pixelmed.geometry.GeometryOfVolume
areReadingDataSet() - Method in class com.pixelmed.dicom.DicomInputStream: Are we reading the dataset?
areReadingMetaHeader() - Method in class com.pixelmed.dicom.DicomInputStream: Are we reading the meta information header?
areSlicesParallel(GeometryOfSlice, GeometryOfSlice) - Static method in class com.pixelmed.geometry.GeometryOfSlice: Determine if two slices are parallel.
areValuesWellFormed() - Method in class com.pixelmed.dicom.AgeStringAttribute
areValuesWellFormed() - Method in class com.pixelmed.dicom.DateAttribute
areValuesWellFormed() - Method in class com.pixelmed.dicom.IntegerStringAttribute
areValuesWellFormed() - Method in class com.pixelmed.dicom.StringAttribute
areValuesWellFormed() - Method in class com.pixelmed.dicom.TimeAttribute
areWritingDataSet() - Method in class com.pixelmed.dicom.DicomOutputStream: Are we writing the dataset?
areWritingMetaHeader() - Method in class com.pixelmed.dicom.DicomOutputStream: Are we writing the meta information header?
ArrayCopyUtilities - Class in com.pixelmed.dicom: A class of static methods for copying data between arrays of different types, expanding arrays, and comparing them, and removing padding from strings.
ArrayCopyUtilities() - Constructor for class com.pixelmed.dicom.ArrayCopyUtilities
arrayOfQuerySOPClasses - Static variable in class com.pixelmed.dicom.SOPClass
arrayOfRetrieveWithGetSOPClasses - Static variable in class com.pixelmed.dicom.SOPClass
arrayOfRetrieveWithMoveSOPClasses - Static variable in class com.pixelmed.dicom.SOPClass
arrayOfStorageSOPClasses - Static variable in class com.pixelmed.dicom.SOPClass
arraysAreEqual(double[], double[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Compare two double arrays and return true if both not null, and are of equal length and contain equal values.
ArterialPulseWaveformStorage - Static variable in class com.pixelmed.dicom.SOPClass
ARTIST - Static variable in class com.pixelmed.convert.TIFFTags
AS - Static variable in class com.pixelmed.dicom.ValueRepresentation
ASCII - Static variable in class com.pixelmed.convert.TIFFTypes
ASSHOTICCPROFILE - Static variable in class com.pixelmed.convert.TIFFTags
ASSHOTNEUTRAL - Static variable in class com.pixelmed.convert.TIFFTags
ASSHOTPREPROFILEMATRIX - Static variable in class com.pixelmed.convert.TIFFTags
ASSHOTWHITEXY - Static variable in class com.pixelmed.convert.TIFFTags
Association - Class in com.pixelmed.network
Association() - Constructor for class com.pixelmed.network.Association
AssociationFactory - Class in com.pixelmed.network: A factory object of static methods that can accept and initiate associations.
AssociationFactory() - Constructor for class com.pixelmed.network.AssociationFactory
associationNumber - Variable in class com.pixelmed.network.Association
AssociationOutputStream - Class in com.pixelmed.network: A specialized java.io.OutputStream which buffers and fragments data which is written to it into PDUs and sends them over the supplied OutputStream which is (presumably) that of the java.net.Socket of an established Association.
AssociationOutputStream(OutputStream, int, int) - Constructor for class com.pixelmed.network.AssociationOutputStream: Construct a PDU buffering OutputStream on top of another OutputStream
associationReleased - Variable in class com.pixelmed.test.TestCMove
associationReleased - Variable in class com.pixelmed.test.TestCStore
associationReleased - Variable in class com.pixelmed.test.TestCStore_AETs
associationReleased - Variable in class com.pixelmed.test.TestCStore_ConvertTransferSyntaxes
AssociationStatusHandler - Class in com.pixelmed.network: This abstract class provides a mechanism for detecting when an Association closes.
AssociationStatusHandler() - Constructor for class com.pixelmed.network.AssociationStatusHandler
ASTM_SIG - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
AsynchronousOutputStream - Class in com.pixelmed.dicom: A class that extends FilterOutputStream by creating a separate thread to actually perform the output operations, and returning immediately from write calls, but blocking on closing.
AsynchronousOutputStream(OutputStream) - Constructor for class com.pixelmed.dicom.AsynchronousOutputStream
AT - Static variable in class com.pixelmed.dicom.ValueRepresentation
Attribute - Class in com.pixelmed.dicom: The Attribute class is an abstract class that contains the core functionality for storing, accessing and maintaining values of a DICOM Attribute.
Attribute(AttributeTag) - Constructor for class com.pixelmed.dicom.Attribute: Construct an (empty) attribute; called only by concrete sub-classes.
AttributeFactory - Class in com.pixelmed.dicom: The AttributeFactory class is a factory class of static methods for creating concrete instances of the abstract class Attribute based on their value representation.
attributeFrameTableScrollPane - Variable in class com.pixelmed.display.DicomImageViewer
AttributeList - Class in com.pixelmed.dicom: The AttributeList class maintains a list of individual DICOM attributes.
AttributeList() - Constructor for class com.pixelmed.dicom.AttributeList
AttributeList.ReadTerminationStrategy - Interface in com.pixelmed.dicom: An interface to supply the criteria for prematurely terminating the reading of a DICOM file.
AttributeListFunctionalGroupsTableModel - Class in com.pixelmed.dicom: The abstract AttributeListFunctionalGroupsTableModel class extends a AttributeListTableModel to abstract the contents of a list of attributes containing shared and per-frame functional groups for multi-frame objects as a table in order to provide support for a AttributeListTableBrowser.
AttributeListFunctionalGroupsTableModel() - Constructor for class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModel: Construct an empty table model.
AttributeListFunctionalGroupsTableModel(AttributeList) - Constructor for class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModel: Construct the table model from an attribute list.
AttributeListFunctionalGroupsTableModel(AttributeList, HashSet, HashSet) - Constructor for class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModel: Construct the table model from an attribute list.
AttributeListFunctionalGroupsTableModelAllFrames - Class in com.pixelmed.dicom: The abstract AttributeListFunctionalGroupsTableModelAllFrames class extends a AttributeListFunctionalGroupsTableModel to abstract the contents of a list of attributes containing shared and per-frame functional groups for multi-frame objects as a table with a row for each frame in order to provide support for a AttributeListTableBrowser.
AttributeListFunctionalGroupsTableModelAllFrames() - Constructor for class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModelAllFrames: Construct an empty table model.
AttributeListFunctionalGroupsTableModelAllFrames(AttributeList) - Constructor for class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModelAllFrames: Construct the table model from an attribute list.
AttributeListFunctionalGroupsTableModelAllFrames(AttributeList, HashSet, HashSet) - Constructor for class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModelAllFrames: Construct the table model from an attribute list.
AttributeListFunctionalGroupsTableModelOneFrame - Class in com.pixelmed.dicom: The abstract AttributeListFunctionalGroupsTableModelOneFrame class extends a AttributeListFunctionalGroupsTableModel to abstract the contents of a list of attributes containing shared and per-frame functional groups for multi-frame objects as a table with a single row for a single frame in order to provide support for a AttributeListTableBrowser.
AttributeListFunctionalGroupsTableModelOneFrame() - Constructor for class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModelOneFrame
AttributeListFunctionalGroupsTableModelOneFrame(AttributeList) - Constructor for class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModelOneFrame
AttributeListFunctionalGroupsTableModelOneFrame(AttributeList, HashSet, HashSet) - Constructor for class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModelOneFrame
AttributeListTableBrowser - Class in com.pixelmed.dicom: The AttributeListTableBrowser class implements a Swing graphical user interface to browse the contents of an AttributeListTableModel.
AttributeListTableBrowser(AttributeListTableModel) - Constructor for class com.pixelmed.dicom.AttributeListTableBrowser: Build and display a graphical user interface view of a table model.
AttributeListTableBrowser(AttributeList) - Constructor for class com.pixelmed.dicom.AttributeListTableBrowser: Build and display a graphical user interface view of a table of attributes.
AttributeListTableBrowser(AttributeList, HashSet<AttributeTag>, HashSet<AttributeTag>) - Constructor for class com.pixelmed.dicom.AttributeListTableBrowser: Build and display a graphical user interface view of a table of attributes.
AttributeListTableModel - Class in com.pixelmed.dicom: The AttributeListTableModel class extends a AbstractTableModel to abstract the contents of a list of attributes as a single row table in order to provide support for a AttributeListTableBrowser.
AttributeListTableModel() - Constructor for class com.pixelmed.dicom.AttributeListTableModel: Construct an empty table model.
AttributeListTableModel(AttributeList) - Constructor for class com.pixelmed.dicom.AttributeListTableModel: Construct the table model from an attribute list.
AttributeListTableModel(AttributeList, HashSet, HashSet) - Constructor for class com.pixelmed.dicom.AttributeListTableModel: Construct the table model from an attribute list.
AttributeModificationDateTime - Static variable in class com.pixelmed.dicom.TagFromName
attributeName - Variable in class com.pixelmed.apps.InsertCodeSequence
AttributeTag - Class in com.pixelmed.dicom: An individual DICOM data element (attribute) tag that includes a group and element (each a 16 bit unsigned binary).
AttributeTag(int, int) - Constructor for class com.pixelmed.dicom.AttributeTag: Construct a DICOM data element (attribute) tag.
AttributeTag(String) - Constructor for class com.pixelmed.dicom.AttributeTag: Construct a DICOM data element (attribute) tag from its string representation.
AttributeTagAttribute - Class in com.pixelmed.dicom: A concrete class specializing Attribute for Attribute Tag (AT) attributes.
AttributeTagAttribute(AttributeTag) - Constructor for class com.pixelmed.dicom.AttributeTagAttribute: Construct an (empty) attribute.
AttributeTagAttribute(AttributeTag, long, DicomInputStream) - Constructor for class com.pixelmed.dicom.AttributeTagAttribute: Read an attribute from an input stream.
AttributeTagAttribute(AttributeTag, Long, DicomInputStream) - Constructor for class com.pixelmed.dicom.AttributeTagAttribute: Read an attribute from an input stream.
AttributeTree - Class in com.pixelmed.dicom: The AttributeTree class implements a TreeModel to abstract the contents of a list of attributes as a tree in order to provide support for a AttributeTreeBrowser.
AttributeTree(AttributeList) - Constructor for class com.pixelmed.dicom.AttributeTree: Construct an entire tree of attributes from an attribute list.
AttributeTreeBrowser - Class in com.pixelmed.dicom: The AttributeTreeBrowser class implements a Swing graphical user interface to browse the contents of an AttributeTree.
AttributeTreeBrowser(AttributeList, JScrollPane) - Constructor for class com.pixelmed.dicom.AttributeTreeBrowser: Build and display a graphical user interface view of a tree of attributes.
AttributeTreeRecord - Class in com.pixelmed.dicom: Instances of the AttributeTreeRecord class represent nodes in a tree of the AttributeTree class, which in turn is used by the AttributeTreeBrowser class.
AttributeTreeRecord(AttributeTreeRecord, Attribute, DicomDictionary) - Constructor for class com.pixelmed.dicom.AttributeTreeRecord: Construct a record for an attribute.
AttributeTreeRecord(AttributeTreeRecord, int) - Constructor for class com.pixelmed.dicom.AttributeTreeRecord: Construct a record for an item of a sequence attribute.
attributeTreeScrollPane - Variable in class com.pixelmed.display.DicomImageViewer
AudioSRStorageTrialRetired - Static variable in class com.pixelmed.dicom.SOPClass
AUTH - Static variable in class com.pixelmed.utils.Syslog
AuthorizationEquipmentCertificationNumber - Static variable in class com.pixelmed.dicom.TagFromName
AUTOMATED_DATA_COLLECTION - Static variable in class com.pixelmed.dose.SourceOfDoseInformation
AutorefractionMeasurementsStorage - Static variable in class com.pixelmed.dicom.SOPClass
aux_file - Variable in class com.pixelmed.convert.AnalyzeHeader
aux_file - Variable in class com.pixelmed.convert.NIfTI1Header
available() - Method in class com.pixelmed.dicom.CompressedFrameDecoder.ByteArrayInputStreamWithOffsetCounterAndOurMethods
available() - Method in class com.pixelmed.transfermonitor.MonitoredInputStream
AXIAL - Static variable in class com.pixelmed.dose.CTScanType
AXIAL_LABEL - Static variable in class com.pixelmed.dicom.DescriptionFactory

B

backgroundIndex - Variable in class com.pixelmed.convert.IndexedLabelMapToSegmentation
backgroundLabel - Variable in class com.pixelmed.convert.IndexedLabelMapToSegmentation
badAnatomyWords - Static variable in class com.pixelmed.anatproc.CTAnatomy
badAnatomyWords - Static variable in class com.pixelmed.anatproc.ProjectionXRayAnatomy
BADFAXLINES - Static variable in class com.pixelmed.convert.TIFFTags
badFieldString - Static variable in class com.pixelmed.ftp.FTPRemoteHostConfigurationDialog
badLateralityOrViewOrAnatomyPhraseTriggers - Static variable in class com.pixelmed.anatproc.CTAnatomy
badLateralityOrViewOrAnatomyPhraseTriggers - Static variable in class com.pixelmed.anatproc.ProjectionXRayAnatomy
badLateralityWords - Static variable in class com.pixelmed.anatproc.ProjectionXRayAnatomy
badViewWords - Static variable in class com.pixelmed.anatproc.ProjectionXRayAnatomy
badWords - Variable in class com.pixelmed.anatproc.DictionaryOfConcepts
BarcodeValue - Static variable in class com.pixelmed.dicom.TagFromName
Base64 - Class in com.pixelmed.utils: Various static methods helpful for converting to and from Base64 representations (e.g., for representing binary values in XML documents).
Base64() - Constructor for class com.pixelmed.utils.Base64
baseCode - Variable in class com.pixelmed.scpecg.HuffmanTable
BASELINEEXPOSURE - Static variable in class com.pixelmed.convert.TIFFTags
BASELINENOISE - Static variable in class com.pixelmed.convert.TIFFTags
BASELINESHARPNESS - Static variable in class com.pixelmed.convert.TIFFTags
baseValueRepresentedByBaseCode - Variable in class com.pixelmed.scpecg.HuffmanTable
BasicStructuredDisplayStorage - Static variable in class com.pixelmed.dicom.SOPClass
BasicTextSRStorage - Static variable in class com.pixelmed.dicom.SOPClass
BasicVoiceStorage - Static variable in class com.pixelmed.dicom.SOPClass
BAYERGREENSPLIT - Static variable in class com.pixelmed.convert.TIFFTags
BESTQUALITYSCALE - Static variable in class com.pixelmed.convert.TIFFTags
bigEndian - Variable in class com.pixelmed.convert.AnalyzeHeader
bigEndian - Variable in class com.pixelmed.convert.NIfTI1Header
bigEndian - Variable in class com.pixelmed.dicom.OtherFloatAttributeMultipleFilesOnDisk
bigEndian - Variable in class com.pixelmed.dicom.OtherWordAttributeMultipleFilesOnDisk
bigEndian - Variable in class com.pixelmed.dicom.OtherWordAttributeOnDisk
bigEndian - Variable in class com.pixelmed.dicom.TransferSyntax
bigEndianToUnsignedInt(byte[], int, int) - Static method in class com.pixelmed.utils.ByteArray: Extract an unsigned big endian integer from a byte array.
bigEndianToUnsignedInt(byte[]) - Static method in class com.pixelmed.utils.ByteArray: Extract an unsigned big endian integer from an entire byte array.
BinaryInputStream - Class in com.pixelmed.dicom: A class that extends FilterInputStream by adding the concept of little and big endian binary value encoding, and supplies functions for reading various sized integer and floating point words.
BinaryInputStream(File, boolean) - Constructor for class com.pixelmed.dicom.BinaryInputStream: Construct a byte ordered stream from the supplied file.
BinaryInputStream(InputStream, boolean) - Constructor for class com.pixelmed.dicom.BinaryInputStream: Construct a byte ordered stream from the supplied stream.
BinaryOutputStream - Class in com.pixelmed.dicom: A class that extends FilterOutputStream by adding the concept of little and big endian binary value encoding, and supplies functions for writing various sized integer and floating point words.
BinaryOutputStream(OutputStream, boolean) - Constructor for class com.pixelmed.dicom.BinaryOutputStream
BitBuffer(byte[]) - Constructor for class com.pixelmed.convert.TIFFToDicom.BitBuffer
bitpix - Variable in class com.pixelmed.convert.AnalyzeHeader
bitpix - Variable in class com.pixelmed.convert.NIfTI1Header
BitsAllocated - Static variable in class com.pixelmed.dicom.TagFromName
BITSPERSAMPLE - Static variable in class com.pixelmed.convert.TIFFTags
BitsStored - Static variable in class com.pixelmed.dicom.TagFromName
BLACKLEVEL - Static variable in class com.pixelmed.convert.TIFFTags
BLACKLEVELDELTAH - Static variable in class com.pixelmed.convert.TIFFTags
BLACKLEVELDELTAV - Static variable in class com.pixelmed.convert.TIFFTags
BLACKLEVELREPEATDIM - Static variable in class com.pixelmed.convert.TIFFTags
blackout(SourceImage, AttributeList, Vector) - Static method in class com.pixelmed.display.ImageEditUtilities: Blackout specified regions in an image, for example to remove burned in identification.
blackout(SourceImage, AttributeList, Vector, boolean) - Static method in class com.pixelmed.display.ImageEditUtilities: Blackout specified regions in an image, for example to remove burned in identification.
blackout(SourceImage, AttributeList, Vector, boolean, boolean, boolean, int) - Static method in class com.pixelmed.display.ImageEditUtilities: Blackout specified regions in an image, for example to remove burned in identification.
BLACKOUT_FAILED - Static variable in class com.pixelmed.display.DicomImageBlackout.StatusNotificationHandler
BlackoutActionListener() - Constructor for class com.pixelmed.display.DicomCleaner.BlackoutActionListener
blackoutApplyButton - Variable in class com.pixelmed.display.DicomImageBlackout
blackoutJPEGBlocks(AttributeList, Vector) - Static method in class com.pixelmed.display.ImageEditUtilities: Blackout JPEG encoded blocks of specified regions in an image, for example to remove burned in identification.
blackoutJPEGBlocks(File, File, Vector) - Static method in class com.pixelmed.display.ImageEditUtilities: Blackout JPEG encoded blocks of specified regions in an image, for example to remove burned in identification.
blackoutNextButton - Variable in class com.pixelmed.display.DicomImageBlackout
blackoutPreviousButton - Variable in class com.pixelmed.display.DicomImageBlackout
blackoutSaveButton - Variable in class com.pixelmed.display.DicomImageBlackout
BlendingSequence - Static variable in class com.pixelmed.dicom.TagFromName
BlendingSoftcopyPresentationStateStorage - Static variable in class com.pixelmed.dicom.SOPClass
BlockData - Static variable in class com.pixelmed.dicom.TagFromName
blue - Variable in class com.pixelmed.dicom.ColorPalette
BluePaletteColorLookupTableData - Static variable in class com.pixelmed.dicom.TagFromName
BluePaletteColorLookupTableDescriptor - Static variable in class com.pixelmed.dicom.TagFromName
blueStaticArray - Static variable in class com.pixelmed.dicom.ColorPaletteHotIron
blueStaticArray - Static variable in class com.pixelmed.dicom.ColorPaletteHotMetalBlue
blueStaticArray - Static variable in class com.pixelmed.dicom.ColorPalettePET
blueStaticArray - Static variable in class com.pixelmed.dicom.ColorPalettePET20Step
BODY32 - Static variable in class com.pixelmed.dose.CTPhantomType
BodyPartExamined - Static variable in class com.pixelmed.dicom.TagFromName
BodyPartThickness - Static variable in class com.pixelmed.dicom.TagFromName
BodyPositionWaveformStorage - Static variable in class com.pixelmed.dicom.SOPClass
bottomZLocationOfReconstructableVolume - Variable in class com.pixelmed.dose.CTAcquisitionParameters
bottomZLocationOfScanningLength - Variable in class com.pixelmed.dose.CTAcquisitionParameters
BreastProjectionXRayImageStorageForPresentation - Static variable in class com.pixelmed.dicom.SOPClass
BreastProjectionXRayImageStorageForProcessing - Static variable in class com.pixelmed.dicom.SOPClass
BreastTomosynthesisImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
BreedRegistrationSequence - Static variable in class com.pixelmed.dicom.TagFromName
brhcX - Variable in class com.pixelmed.display.DisplayedAreaSelection
brhcY - Variable in class com.pixelmed.display.DisplayedAreaSelection
BrowserPaneChangeEvent - Class in com.pixelmed.display.event
BrowserPaneChangeEvent(EventContext, int) - Constructor for class com.pixelmed.display.event.BrowserPaneChangeEvent
buf - Variable in class com.pixelmed.dicom.CompressedFrameDecoder.ByteArrayInputStreamWithOffsetCounterAndOurMethods
bufferedImageSource - Variable in class com.pixelmed.display.SourceImage
BufferedImageUtilities - Class in com.pixelmed.display
BufferedImageUtilities() - Constructor for class com.pixelmed.display.BufferedImageUtilities
bufferTypeNames - Static variable in class com.pixelmed.display.BufferedImageUtilities: Indexes correspond to DataBuffer.TYPE_xxx values, except TYPE_UNDEFINED.
buildDate - Variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
buildDate - Variable in class com.pixelmed.apps.StudyReceiver
buildInstanceTitle(SCPECG) - Static method in class com.pixelmed.displaywave.SCPSourceECG
buildInstanceTitle() - Static method in class com.pixelmed.displaywave.SourceECG
buildInstanceTitleFromAttributeList() - Method in class com.pixelmed.dicom.AttributeList: Construct a text title to describe this list.
buildInstanceTitleFromAttributeList(AttributeList) - Static method in class com.pixelmed.dicom.AttributeList: Construct a text title to describe the specified list.
buildMouseListenerToDetectDoubleClickEvents() - Method in class com.pixelmed.database.DatabaseTreeBrowser
buildMouseListenerToDetectDoubleClickEvents() - Method in class com.pixelmed.dicom.DicomDirectoryBrowser
buildPreferredDisplaySequence() - Method in class com.pixelmed.displaywave.SourceECG: Use the default encoded order.
buildPreferredDisplaySequence(String[]) - Method in class com.pixelmed.displaywave.SourceECG: Using the lead descriptions, look for patterns and determine the desired sequential display order, defaulting to the encoded order if no recognized pattern.
buildTreeSelectionListenerToDisplayAttributesOfSelectedRecord(JScrollPane) - Method in class com.pixelmed.database.DatabaseTreeBrowser: By default this method populates the tabular attribute browser when an entity is selected in the tree browser.
buildTreeSelectionListenerToDisplayAttributesOfSelectedRecord(JScrollPane) - Method in class com.pixelmed.dicom.DicomDirectoryBrowser
buildTreeSelectionListenerToDisplayAttributesOfSelectedRecord(JScrollPane) - Method in class com.pixelmed.query.QueryTreeBrowser: By default this method populates the tabular attribute browser when an entity is selected in the tree browser.
buildTreeSelectionListenerToDoSomethingWithSelectedFiles() - Method in class com.pixelmed.apps.DoseUtility.OurSourceDatabaseTreeBrowser
buildTreeSelectionListenerToDoSomethingWithSelectedFiles() - Method in class com.pixelmed.apps.DownloadOrTransmit.OurSourceDatabaseTreeBrowser
buildTreeSelectionListenerToDoSomethingWithSelectedFiles() - Method in class com.pixelmed.database.DatabaseTreeBrowser: Override this method to perform application-specific behavior when an entity is selected in the tree browser.
buildTreeSelectionListenerToDoSomethingWithSelectedFiles(String) - Method in class com.pixelmed.dicom.DicomDirectoryBrowser
buildTreeSelectionListenerToDoSomethingWithSelectedLevel() - Method in class com.pixelmed.apps.DoseUtility.OurQueryTreeBrowser
buildTreeSelectionListenerToDoSomethingWithSelectedLevel() - Method in class com.pixelmed.apps.DownloadOrTransmit.OurQueryTreeBrowser
buildTreeSelectionListenerToDoSomethingWithSelectedLevel() - Method in class com.pixelmed.display.DicomCleaner.OurQueryTreeBrowser
buildTreeSelectionListenerToDoSomethingWithSelectedLevel() - Method in class com.pixelmed.query.QueryTreeBrowser: Override this method to perform application-specific behavior when an entity is selected in the tree browser.
buildUIComponents() - Method in class com.pixelmed.display.DicomImageBlackout
BurnedInAnnotation - Static variable in class com.pixelmed.dicom.TagFromName
burnedinflag - Variable in class com.pixelmed.display.DicomImageBlackout
burnInOverlays - Variable in class com.pixelmed.display.DicomImageBlackout
businessNames - Variable in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
businessNameToUseForAnonymousContentItems - Static variable in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
BYSOPINSTANCEUIDCOMPONENTFOLDERS - Static variable in class com.pixelmed.dicom.StoredFilePathStrategy: Store all the stored files in a hierarchy of folders using successive numeric components of the SOP Instance UID as the folder name and the SOP Instance UID as the filename within the most deeply nested folder.
BYSOPINSTANCEUIDHASHSUBFOLDERS - Static variable in class com.pixelmed.dicom.StoredFilePathStrategy: Store all the stored files in a hierarchy of folders using successive decimal digits of the hashcode of the SOP Instance UID as the folder name and the SOP Instance UID as the filename within the most deeply nested folder.
BYSOPINSTANCEUIDINSINGLEFOLDER - Static variable in class com.pixelmed.dicom.StoredFilePathStrategy: Store all the stored files in a single folder, using the SOP Instance UID as the filename.
BYTE - Static variable in class com.pixelmed.convert.TIFFTypes
byte_offset_of_binary - Variable in class com.pixelmed.convert.NRRDHeader
ByteArray - Class in com.pixelmed.utils: Various static methods helpful for manipulating arrays of bytes and extracting values from them.
byteArrayContainsNonASCIIValues(byte[], int, int) - Static method in class com.pixelmed.dicom.SpecificCharacterSet: Check a byte array for the presence of non-ASCII bytes.
byteArrayContainsNonASCIIValues(byte[]) - Static method in class com.pixelmed.dicom.SpecificCharacterSet: Check a byte array for the presence of non-ASCII bytes.
ByteArrayInputStreamWithOffsetCounterAndOurMethods(byte[]) - Constructor for class com.pixelmed.dicom.CompressedFrameDecoder.ByteArrayInputStreamWithOffsetCounterAndOurMethods
byteArrayToHexString(byte[], int, int) - Static method in class com.pixelmed.utils.HexDump: Create a continuous hex string representation of a specified portion of a byte array.
byteArrayToHexString(byte[]) - Static method in class com.pixelmed.utils.HexDump: Create a continuous hex string representation of a byte array.
byteArrayToPrintableString(byte[], int, int) - Static method in class com.pixelmed.utils.HexDump: Create a printable string representation of a specified portion of a byte array in the default character set.
byteArrayToPrintableString(byte[]) - Static method in class com.pixelmed.utils.HexDump: Create a printable string representation of a specified portion of a byte array in the default character set.
ByteFrameSource - Interface in com.pixelmed.dicom
byteOffset - Variable in class com.pixelmed.dicom.BinaryOutputStream
byteOffset - Variable in class com.pixelmed.dicom.OtherAttributeOnDisk
byteOffset - Variable in class com.pixelmed.dicom.SequenceItem
byteOffsets - Variable in class com.pixelmed.dicom.OtherByteAttributeMultipleFilesOnDisk
byteOffsets - Variable in class com.pixelmed.dicom.OtherFloatAttributeMultipleFilesOnDisk
byteOffsets - Variable in class com.pixelmed.dicom.OtherWordAttributeMultipleFilesOnDisk
byteOrder - Variable in class com.pixelmed.convert.TIFFFile
bytes - Variable in class com.pixelmed.convert.AnalyzeHeader
bytes - Variable in class com.pixelmed.convert.NIfTI1Header
byteSizeOfOffsets - Variable in class com.pixelmed.convert.TIFFFile
bytesRead - Variable in class com.pixelmed.scpecg.Section
byteToPaddedDecimalString(int) - Static method in class com.pixelmed.utils.HexDump: Convert an unsigned byte value to a decimal string of three characters with leading space padding.
byteToPaddedHexString(int) - Static method in class com.pixelmed.utils.HexDump: Convert an unsigned byte value to a hexadecimal string of two characters with leading zero padding.
byteToPaddedHexStringWith0x(int) - Static method in class com.pixelmed.utils.HexDump: Convert an unsigned byte value to a hexadecimal string of two characters with leading 0x and leading zero padding.

C

C - Variable in class com.pixelmed.geometry.GeometryOfSlice
C - Variable in class com.pixelmed.geometry.GeometryOfVolume
C4 - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
C5 - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
C_CANCEL_RQ - Static variable in class com.pixelmed.network.MessageServiceElementCommand
C_ECHO_RQ - Static variable in class com.pixelmed.network.MessageServiceElementCommand
C_ECHO_RSP - Static variable in class com.pixelmed.network.MessageServiceElementCommand
C_FIND_RQ - Static variable in class com.pixelmed.network.MessageServiceElementCommand
C_FIND_RSP - Static variable in class com.pixelmed.network.MessageServiceElementCommand
C_GET_RQ - Static variable in class com.pixelmed.network.MessageServiceElementCommand
C_GET_RSP - Static variable in class com.pixelmed.network.MessageServiceElementCommand
C_MOVE_RQ - Static variable in class com.pixelmed.network.MessageServiceElementCommand
C_MOVE_RSP - Static variable in class com.pixelmed.network.MessageServiceElementCommand
C_STORE_RQ - Static variable in class com.pixelmed.network.MessageServiceElementCommand
C_STORE_RSP - Static variable in class com.pixelmed.network.MessageServiceElementCommand
caDSR - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
cal_max - Variable in class com.pixelmed.convert.AnalyzeHeader
cal_max - Variable in class com.pixelmed.convert.NIfTI1Header
cal_min - Variable in class com.pixelmed.convert.AnalyzeHeader
cal_min - Variable in class com.pixelmed.convert.NIfTI1Header
CALIBRATIONILLUMINANT1 - Static variable in class com.pixelmed.convert.TIFFTags
CALIBRATIONILLUMINANT2 - Static variable in class com.pixelmed.convert.TIFFTags
CalibrationImage - Static variable in class com.pixelmed.dicom.TagFromName
calledAETitle - Variable in class com.pixelmed.apps.MultiModalitySimulator
calledAETitle - Variable in class com.pixelmed.network.Association
calledAETitleField - Variable in class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog
calledAETitleField - Variable in class com.pixelmed.network.NetworkApplicationConfigurationDialog
CALLFUNCTION - Static variable in class com.pixelmed.display.DemographicAndTechniqueAnnotations
callingAETitle - Variable in class com.pixelmed.network.Association
callingAETitleField - Variable in class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog
callingAETitleField - Variable in class com.pixelmed.network.NetworkApplicationConfigurationDialog
callTarget(Object) - Method in class apple.dts.samplecode.osxadapter.OSXAdapter
CAMERACALIBRATION1 - Static variable in class com.pixelmed.convert.TIFFTags
CAMERACALIBRATION2 - Static variable in class com.pixelmed.convert.TIFFTags
CAMERASERIALNUMBER - Static variable in class com.pixelmed.convert.TIFFTags
CancelActionListener() - Constructor for class com.pixelmed.display.DicomCleaner.CancelActionListener
CancelActionListener(DicomImageBlackout) - Constructor for class com.pixelmed.display.DicomImageBlackout.CancelActionListener
CANCELLED - Static variable in class com.pixelmed.display.DicomImageBlackout.StatusNotificationHandler
canConnectToPort(String, int) - Static method in class com.pixelmed.network.ProbeCapability: Can a connection to the specified address and port be established?
canConnectToPort(String, int, int) - Static method in class com.pixelmed.network.ProbeCapability: Can a connection to the specified address and port be established?
canDecompress(File) - Static method in class com.pixelmed.dicom.CompressedFrameDecoder: Returns a whether or not a DICOM file contains pixel data that can be decompressed using this class.
canDecompress(String) - Static method in class com.pixelmed.dicom.CompressedFrameDecoder: Returns a whether or not a DICOM file contains pixel data that can be decompressed using this class.
canUseBzip - Variable in class com.pixelmed.apps.DeidentifyAndRedact.OurMediaImporter
canUseBzip - Variable in class com.pixelmed.apps.DoseUtility.OurMediaImporter
canUseBzip - Variable in class com.pixelmed.apps.DownloadOrTransmit.OurMediaImporter
canUseBzip - Variable in class com.pixelmed.apps.MergeConcatenationInstances.OurMediaImporter
canUseBzip - Variable in class com.pixelmed.display.DicomCleaner.OurMediaImporter
canUseBzip - Variable in class com.pixelmed.display.DicomImageViewer.OurDatabaseMediaImporter
CapabilitiesAvailable - Class in com.pixelmed.utils: Various capability detection methods.
CapabilitiesAvailable() - Constructor for class com.pixelmed.utils.CapabilitiesAvailable
CardiacElectrophysiologyWaveformStorage - Static variable in class com.pixelmed.dicom.SOPClass
CArmPhotonElectronRadiationRecordStorage - Static variable in class com.pixelmed.dicom.SOPClass
CArmPhotonElectronRadiationStorage - Static variable in class com.pixelmed.dicom.SOPClass
caseSensitiveCodeMeaningValidationCheckBox - Variable in class com.pixelmed.apps.DoseUtility
caseSensitiveCodeMeaningValidationLabelText - Static variable in class com.pixelmed.apps.DoseUtility
CD2 - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
CEchoRequestCommandMessage - Class in com.pixelmed.network
CEchoRequestCommandMessage(AttributeList) - Constructor for class com.pixelmed.network.CEchoRequestCommandMessage
CEchoRequestCommandMessage() - Constructor for class com.pixelmed.network.CEchoRequestCommandMessage
CEchoResponseCommandMessage - Class in com.pixelmed.network
CEchoResponseCommandMessage(AttributeList) - Constructor for class com.pixelmed.network.CEchoResponseCommandMessage
CEchoResponseCommandMessage(String, int, int) - Constructor for class com.pixelmed.network.CEchoResponseCommandMessage
CELLLENGTH - Static variable in class com.pixelmed.convert.TIFFTags
CELLWIDTH - Static variable in class com.pixelmed.convert.TIFFTags
CenterMaximumAfterInitialSizeLayout() - Constructor for class com.pixelmed.display.DicomImageBlackout.CenterMaximumAfterInitialSizeLayout
CenterOfCircularShutter - Static variable in class com.pixelmed.dicom.TagFromName
centerOfCircularShutterX - Variable in class com.pixelmed.dicom.DisplayShutter
centerOfCircularShutterY - Variable in class com.pixelmed.dicom.DisplayShutter
CFALAYOUT - Static variable in class com.pixelmed.convert.TIFFTags
CFAPLANECOLOR - Static variable in class com.pixelmed.convert.TIFFTags
cFindAssociation - Variable in class com.pixelmed.query.QueryInformationModel
CFindRequestCommandMessage - Class in com.pixelmed.network
CFindRequestCommandMessage(AttributeList) - Constructor for class com.pixelmed.network.CFindRequestCommandMessage
CFindRequestCommandMessage(String) - Constructor for class com.pixelmed.network.CFindRequestCommandMessage
CFindResponseCommandMessage - Class in com.pixelmed.network
CFindResponseCommandMessage(AttributeList) - Constructor for class com.pixelmed.network.CFindResponseCommandMessage
CFindResponseCommandMessage(String, int, int, boolean) - Constructor for class com.pixelmed.network.CFindResponseCommandMessage
CFindResponseCommandMessage(String, int, int, boolean, AttributeTagAttribute, String) - Constructor for class com.pixelmed.network.CFindResponseCommandMessage
CGetRequestCommandMessage - Class in com.pixelmed.network
CGetRequestCommandMessage(AttributeList) - Constructor for class com.pixelmed.network.CGetRequestCommandMessage
CGetRequestCommandMessage(String) - Constructor for class com.pixelmed.network.CGetRequestCommandMessage
CGetResponseCommandMessage - Class in com.pixelmed.network
CGetResponseCommandMessage(AttributeList) - Constructor for class com.pixelmed.network.CGetResponseCommandMessage
CGetResponseCommandMessage(String, int, int, boolean, AttributeTagAttribute, String) - Constructor for class com.pixelmed.network.CGetResponseCommandMessage
CGetResponseCommandMessage(String, int, int, boolean, int, int, int, int) - Constructor for class com.pixelmed.network.CGetResponseCommandMessage
changed(Event) - Method in class com.pixelmed.event.Listener
changeDimensionToFitInMaximumAvailable(Dimension, Dimension, boolean) - Method in class com.pixelmed.display.DicomImageBlackout
changesWereMade - Variable in class com.pixelmed.display.DicomImageBlackout
ChannelDefinitionSequence - Static variable in class com.pixelmed.dicom.TagFromName
ChannelLabel - Static variable in class com.pixelmed.dicom.TagFromName
channelNames - Variable in class com.pixelmed.displaywave.SourceECG
ChannelSensitivity - Static variable in class com.pixelmed.dicom.TagFromName
ChannelSensitivityCorrectionFactor - Static variable in class com.pixelmed.dicom.TagFromName
ChannelSensitivityUnitsSequence - Static variable in class com.pixelmed.dicom.TagFromName
ChannelSourceSequence - Static variable in class com.pixelmed.dicom.TagFromName
check3D2DConversion(GeometryOfSlice, double, double, double, double, double) - Method in class com.pixelmed.test.TestGeometryOfSlice
checkAllAreAsExpected(AttributeList) - Method in class com.pixelmed.test.TestCleanerReceiveAndClean
CheckAllUIDReferencesResolve - Class in com.pixelmed.apps: A class to process a set of multiple files and check that all referenced SOP Instances are present within the set.
CheckAllUIDReferencesResolve(String[]) - Constructor for class com.pixelmed.apps.CheckAllUIDReferencesResolve: Process a set of multiple files and check that all referenced SOP Instances are present within the set.
CheckAllUIDReferencesResolve.OurMediaImporter - Class in com.pixelmed.apps
checkAndSetVolumeSampledRegularlyAlongFrameDimension() - Method in class com.pixelmed.geometry.GeometryOfVolume: Check if the set of frames regularly sampled along the frame dimension.
checkIsAsExpected(AttributeList) - Method in class com.pixelmed.test.TestCleanerReceiveAndClean.ExpectedResult
checkIsEventDispatchThreadElseException() - Static method in class com.pixelmed.utils.ThreadUtilities
checkSanityOfValueLength(long, byte[], AttributeTag, boolean) - Method in class com.pixelmed.dicom.AttributeList: Check that the value length is reasonable under the circumstances.
checkUnitIs_mGy(CodedSequenceItem) - Static method in class com.pixelmed.dose.CTDoseAcquisition
checkUnitIs_mGycm(CodedSequenceItem) - Static method in class com.pixelmed.dose.CTDoseAcquisition
ChestCADSRStorage - Static variable in class com.pixelmed.dicom.SOPClass
ChestImageViewer - Class in com.pixelmed.display: This class is an entire application for displaying and viewing chest x-ray images.
ChestImageViewer(String[]) - Constructor for class com.pixelmed.display.ChestImageViewer
children() - Method in class com.pixelmed.database.DatabaseTreeRecord: Returns the children of this node as an Enumeration.
children() - Method in class com.pixelmed.dicom.AttributeTreeRecord: Returns the children of this node as an Enumeration.
children() - Method in class com.pixelmed.dicom.ContentItem: Returns the children of this node as an Enumeration.
children() - Method in class com.pixelmed.dicom.DicomDirectoryRecord
children - Variable in class com.pixelmed.query.QueryTreeRecord
children() - Method in class com.pixelmed.query.QueryTreeRecord: Returns the children of this node as an Enumeration.
children() - Method in class com.pixelmed.scpecg.SCPTreeRecord: Returns the children of this node as an Enumeration.
childrenPopulated - Variable in class com.pixelmed.query.QueryTreeRecord
chooseAppropriateConvertedSOPClassUID(AttributeList) - Static method in class com.pixelmed.dicom.MultiFrameImageFactory: Given the Attributes of a "classic" single frame instance, choose an appropriate multi-frame (enhanced) image SOP Class to convert it to.
chooseExcludeList(DicomDirectoryRecord) - Method in class com.pixelmed.dicom.DicomDirectoryBrowser
chooseOutputFormatForTransferSyntax(String) - Static method in class com.pixelmed.dicom.CompressedFrameEncoder: Determine the output format string used by the JIIO codecs for the DICOM Transfer Syntax.
choosePathAndImportDicomFiles(Component) - Method in class com.pixelmed.dicom.MediaImporter: Pop up a file chooser dialog that allows the user to specify the location of the DICOMDIR file, or the parent folder (for example, the drive or volume) in which the DICOMDIR file is located, and then import the referenced files.
choosePathAndImportDicomFiles() - Method in class com.pixelmed.dicom.MediaImporter: Pop up a file chooser dialog that allows the user to specify the location of the DICOMDIR file, or the parent folder (for example, the drive or volume) in which the DICOMDIR file is located, and then import the referenced files.
choosePathsAndConvertAmicasFiles() - Method in class com.pixelmed.convert.ConvertAmicasJPEG2000FilesetToDicom: Pop up folder chooser dialogs that allow the user to specify the location of the amicas-patients folder, or the parent folder (for example, the drive or volume) in which the amicas-patients folder is located, and the output folder to store the converted DICOM files, and then perform the conversion.
chooser - Variable in class com.pixelmed.display.SafeFileChooser
chooseTransferSyntaxForOutputFormat(String) - Static method in class com.pixelmed.dicom.CompressedFrameEncoder: Determine the DICOM Transfer Syntax for the output format string used by the JIIO codecs.
CHROMABLURRADIUS - Static variable in class com.pixelmed.convert.TIFFTags
cieLabScaled - Variable in class com.pixelmed.display.SuperimposedImage
cineSlider - Variable in class com.pixelmed.display.DicomImageBlackout
cineSliderChangeListener - Variable in class com.pixelmed.display.DicomImageBlackout
CineSliderChangeListener() - Constructor for class com.pixelmed.display.DicomImageBlackout.CineSliderChangeListener
cineSliderControlsPanel - Variable in class com.pixelmed.display.DicomImageBlackout
classifyCornersIntoEdgeCrossingZPlane(Point3d, Point3d) - Static method in class com.pixelmed.geometry.LocalizerPoster
className - Variable in class com.pixelmed.slf4j.Logger
clean(Object) - Static method in class com.pixelmed.display.SourceImage
CleanActionListener() - Constructor for class com.pixelmed.display.DicomCleaner.CleanActionListener
CLEANFAXDATA - Static variable in class com.pixelmed.convert.TIFFTags
cleanUIDsCheckBox - Variable in class com.pixelmed.display.DicomCleaner
cleanUIDsLabelText - Static variable in class com.pixelmed.test.TestCleanerReceiveAndClean
clear() - Method in class com.pixelmed.display.ChestImageViewer
clear() - Method in class com.pixelmed.display.MammoImageViewer
ClearActionListener() - Constructor for class com.pixelmed.display.DialogMessageLogger.ClearActionListener
clearByteOffset(AttributeList) - Static method in class com.pixelmed.dicom.AttributeList: Clear the byte offset value of any SequenceItems.
ClinicalTrialCoordinatingCenterName - Static variable in class com.pixelmed.dicom.TagFromName
ClinicalTrialProtocolEthicsCommitteeApprovalNumber - Static variable in class com.pixelmed.dicom.TagFromName
ClinicalTrialProtocolEthicsCommitteeName - Static variable in class com.pixelmed.dicom.TagFromName
ClinicalTrialProtocolID - Static variable in class com.pixelmed.dicom.TagFromName
ClinicalTrialProtocolName - Static variable in class com.pixelmed.dicom.TagFromName
ClinicalTrialsAttributes - Class in com.pixelmed.dicom: An abstract class of static methods to support removing identifying attributes and adding Clinical Trials Patient, Study and Series Modules attributes.
ClinicalTrialsAttributes.HandleDates - Class in com.pixelmed.dicom
ClinicalTrialsAttributes.HandleStructuredContent - Class in com.pixelmed.dicom
ClinicalTrialsAttributes.HandleUIDs - Class in com.pixelmed.dicom
ClinicalTrialSeriesDescription - Static variable in class com.pixelmed.dicom.TagFromName
ClinicalTrialSeriesID - Static variable in class com.pixelmed.dicom.TagFromName
clinicalTrialSeriesModuleAttributeTags - Static variable in class com.pixelmed.dicom.CompositeInstanceContext
ClinicalTrialSiteID - Static variable in class com.pixelmed.dicom.TagFromName
ClinicalTrialSiteName - Static variable in class com.pixelmed.dicom.TagFromName
ClinicalTrialSponsorName - Static variable in class com.pixelmed.dicom.TagFromName
clinicalTrialStudyModuleAttributeTags - Static variable in class com.pixelmed.dicom.CompositeInstanceContext
ClinicalTrialSubjectID - Static variable in class com.pixelmed.dicom.TagFromName
clinicalTrialSubjectModuleAttributeTags - Static variable in class com.pixelmed.dicom.CompositeInstanceContext
ClinicalTrialSubjectReadingID - Static variable in class com.pixelmed.dicom.TagFromName
ClinicalTrialTimePointDescription - Static variable in class com.pixelmed.dicom.TagFromName
ClinicalTrialTimePointID - Static variable in class com.pixelmed.dicom.TagFromName
clipAllFramesToSpecifiedSize(AttributeList, int[]) - Method in class com.pixelmed.apps.ShrinkSegmentationToBoundingBox
CLIPPATH - Static variable in class com.pixelmed.convert.TIFFTags
clipToRectangleWithGraphicsDraw(BufferedImage, Rectangle, Color) - Static method in class com.pixelmed.display.BufferedImageUtilities
clone() - Method in class com.pixelmed.display.DisplayedAreaSelection
close() - Method in class com.pixelmed.database.DatabaseInformationModel: Close the underlying connection to the database and shutdown any external SQL server.
close() - Method in class com.pixelmed.dicom.AsynchronousOutputStream: Closes this output stream and releases any system resources associated with the stream.
close() - Method in class com.pixelmed.dicom.NullOutputStream
close() - Method in class com.pixelmed.display.SourceImage
close() - Method in class com.pixelmed.display.SourceImageSubset
close() - Method in class com.pixelmed.network.AssociationOutputStream: Sets the last fragment flag and flushes (which sends a zero length PDU if necessary, and pads to an even length, if necessary).
close() - Method in class com.pixelmed.network.NetworkConfigurationSource: Close down any running threads related to an instance of this class.
close() - Method in interface com.pixelmed.query.QueryResponseGenerator: Clean up after the query has completed.
close() - Method in interface com.pixelmed.query.RetrieveResponseGenerator: Clean up after the retrieval has completed.
close() - Method in class com.pixelmed.transfermonitor.MonitoredInputStream
close() - Method in class com.pixelmed.transfermonitor.MonitoredOutputStream
close() - Method in class com.pixelmed.transfermonitor.TransferMonitoringContext: Close the monitoring context since no more transfers are expected.
close() - Method in class com.pixelmed.utils.ScrollingTextAreaWriter
closePdfFile() - Method in class com.pixelmed.utils.PdfDecoder
cMoveAssociation - Variable in class com.pixelmed.query.QueryInformationModel
CMoveRequestCommandMessage - Class in com.pixelmed.network
CMoveRequestCommandMessage(AttributeList) - Constructor for class com.pixelmed.network.CMoveRequestCommandMessage
CMoveRequestCommandMessage(String, String) - Constructor for class com.pixelmed.network.CMoveRequestCommandMessage
CMoveResponseCommandMessage - Class in com.pixelmed.network
CMoveResponseCommandMessage(AttributeList) - Constructor for class com.pixelmed.network.CMoveResponseCommandMessage
CMoveResponseCommandMessage(String, int, int, boolean, AttributeTagAttribute, String) - Constructor for class com.pixelmed.network.CMoveResponseCommandMessage
CMoveResponseCommandMessage(String, int, int, boolean, int, int, int, int) - Constructor for class com.pixelmed.network.CMoveResponseCommandMessage
CodeContentItem(ContentItem, AttributeList) - Constructor for class com.pixelmed.dicom.ContentItemFactory.CodeContentItem
CodeContentItem(ContentItem, String, CodedSequenceItem, CodedSequenceItem, String, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.CodeContentItem
CodeContentItem(ContentItem, String, CodedSequenceItem, CodedSequenceItem) - Constructor for class com.pixelmed.dicom.ContentItemFactory.CodeContentItem
codeContentItemValueMatchesCodeValueAndCodingSchemeDesignator(ContentItem, String, String) - Static method in class com.pixelmed.dicom.ContentItemFactory: Test if the coded value of the code content item matches the specified code value and coding scheme designator.
CodedConcept - Class in com.pixelmed.anatproc: This class represents a concept that has a coded representation.
CodedConcept(String, String, String, String, String, String, String, String, String[]) - Constructor for class com.pixelmed.anatproc.CodedConcept: Create a coded concept.
CodedConcept() - Constructor for class com.pixelmed.anatproc.CodedConcept
CodedSequenceItem - Class in com.pixelmed.dicom: A class to encapsulate the attributes contained within a Sequence Item that represents a Coded Sequence item.
CodedSequenceItem(AttributeList) - Constructor for class com.pixelmed.dicom.CodedSequenceItem: Construct a CodedSequenceItem from a list of attributes.
CodedSequenceItem(String, String, String) - Constructor for class com.pixelmed.dicom.CodedSequenceItem: Construct a CodedSequenceItem from string values for code value, scheme and meaning.
CodedSequenceItem(String, String, String, String) - Constructor for class com.pixelmed.dicom.CodedSequenceItem: Construct a CodedSequenceItem from string values for code value, scheme, version and meaning.
CodedSequenceItem(String) - Constructor for class com.pixelmed.dicom.CodedSequenceItem: Construct a CodedSequenceItem from a single string representation of the tuple enclosed in parentheses.
codeMeaning - Variable in class com.pixelmed.anatproc.CodedConcept
codeMeaning - Variable in class com.pixelmed.apps.InsertCodeSequence
CodeMeaning - Static variable in class com.pixelmed.dicom.TagFromName
CODEMEANING - Static variable in class com.pixelmed.display.DemographicAndTechniqueAnnotations
CodeStringAttribute - Class in com.pixelmed.dicom: A concrete class specializing Attribute for Code String (CS) attributes.
CodeStringAttribute(AttributeTag) - Constructor for class com.pixelmed.dicom.CodeStringAttribute: Construct an (empty) attribute.
CodeStringAttribute(AttributeTag, long, DicomInputStream) - Constructor for class com.pixelmed.dicom.CodeStringAttribute: Read an attribute from an input stream.
CodeStringAttribute(AttributeTag, Long, DicomInputStream) - Constructor for class com.pixelmed.dicom.CodeStringAttribute: Read an attribute from an input stream.
codeStringEquivalent - Variable in class com.pixelmed.anatproc.CodedConcept
codeStringEquivalentToConceptEntries - Variable in class com.pixelmed.anatproc.DictionaryOfConcepts
codeValue - Variable in class com.pixelmed.anatproc.CodedConcept
codeValue - Variable in class com.pixelmed.anatproc.SchemeAndValuePair
codeValue - Variable in class com.pixelmed.apps.InsertCodeSequence
CodeValue - Static variable in class com.pixelmed.dicom.TagFromName
CODINGMETHODS - Static variable in class com.pixelmed.convert.TIFFTags
codingSchemeDesignator - Variable in class com.pixelmed.anatproc.CodedConcept
codingSchemeDesignator - Variable in class com.pixelmed.anatproc.SchemeAndValuePair
codingSchemeDesignator - Variable in class com.pixelmed.apps.InsertCodeSequence
codingSchemeDesignator - Variable in class com.pixelmed.dicom.CodingSchemeIdentificationItem
CodingSchemeDesignator - Static variable in class com.pixelmed.dicom.TagFromName
CodingSchemeIdentification - Class in com.pixelmed.dicom: A class to encapsulate the information related to Coding Scheme Identification encoded in composite instances within CodingSchemeIdentificationSequence.
CodingSchemeIdentification(AttributeList) - Constructor for class com.pixelmed.dicom.CodingSchemeIdentification: Construct a CodingSchemeIdentification instance from the CodingSchemeIdentificationSequence in the supplied list.
CodingSchemeIdentification(List<CodingSchemeIdentificationItem>) - Constructor for class com.pixelmed.dicom.CodingSchemeIdentification: Construct a CodingSchemeIdentification from a list of CodingSchemeIdentificationItems.
CodingSchemeIdentificationItem - Class in com.pixelmed.dicom: A class to encapsulate the attributes of an Item of CodingSchemeIdentificationSequence.
CodingSchemeIdentificationItem(String, String, String, String) - Constructor for class com.pixelmed.dicom.CodingSchemeIdentificationItem
CodingSchemeIdentificationItem(SequenceItem) - Constructor for class com.pixelmed.dicom.CodingSchemeIdentificationItem
CodingSchemeIdentificationSequence - Static variable in class com.pixelmed.dicom.TagFromName
codingSchemeName - Variable in class com.pixelmed.dicom.CodingSchemeIdentificationItem
CodingSchemeName - Static variable in class com.pixelmed.dicom.TagFromName
codingSchemeRegistry - Variable in class com.pixelmed.dicom.CodingSchemeIdentificationItem
CodingSchemeRegistry - Static variable in class com.pixelmed.dicom.TagFromName
CodingSchemeResponsibleOrganization - Static variable in class com.pixelmed.dicom.TagFromName
codingSchemeUID - Variable in class com.pixelmed.dicom.CodingSchemeIdentificationItem
CodingSchemeUID - Static variable in class com.pixelmed.dicom.TagFromName
codingSchemeUIDFor99IPCMR - Static variable in class com.pixelmed.dicom.VersionAndConstants
codingSchemeUIDFor99PMP - Static variable in class com.pixelmed.dicom.VersionAndConstants
codingSchemeVersion - Variable in class com.pixelmed.anatproc.CodedConcept
codingSchemeVersion - Variable in class com.pixelmed.apps.InsertCodeSequence
CodingSchemeVersion - Static variable in class com.pixelmed.dicom.TagFromName
CoercionModel - Class in com.pixelmed.dicom: A class to encapsulate patient and study information to be used for coercion of identifiers in DICOM instances.
CoercionModel(Vector) - Constructor for class com.pixelmed.dicom.CoercionModel
collapseAttributeValueArrays - Static variable in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
collapseContentTreeArrays - Static variable in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
collapseEmptyToNull - Static variable in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
ColonCADSRStorage - Static variable in class com.pixelmed.dicom.SOPClass
COLOR_ANNOTATIONS - Static variable in class com.pixelmed.display.ConsumerFormatImageMaker
COLORMAP - Static variable in class com.pixelmed.convert.TIFFTags
COLORMATRIX1 - Static variable in class com.pixelmed.convert.TIFFTags
COLORMATRIX2 - Static variable in class com.pixelmed.convert.TIFFTags
ColorPalette - Class in com.pixelmed.dicom: A class to encapsulate color palettes, including serialization and deserialization to and from standard DICOM color palette IODs.
ColorPalette() - Constructor for class com.pixelmed.dicom.ColorPalette
ColorPaletteHotIron - Class in com.pixelmed.dicom: Standard DICOM Hot Iron color palette.
ColorPaletteHotIron() - Constructor for class com.pixelmed.dicom.ColorPaletteHotIron
ColorPaletteHotMetalBlue - Class in com.pixelmed.dicom: Standard DICOM Hot Metal Blue color palette.
ColorPaletteHotMetalBlue() - Constructor for class com.pixelmed.dicom.ColorPaletteHotMetalBlue
ColorPaletteInformationModelFind - Static variable in class com.pixelmed.dicom.SOPClass
ColorPaletteInformationModelGet - Static variable in class com.pixelmed.dicom.SOPClass
ColorPaletteInformationModelMove - Static variable in class com.pixelmed.dicom.SOPClass
ColorPalettePET - Class in com.pixelmed.dicom: Standard DICOM PET color palette.
ColorPalettePET() - Constructor for class com.pixelmed.dicom.ColorPalettePET
ColorPalettePET20Step - Class in com.pixelmed.dicom: Standard DICOM PET 20 Step color palette.
ColorPalettePET20Step() - Constructor for class com.pixelmed.dicom.ColorPalettePET20Step
ColorPaletteStorage - Static variable in class com.pixelmed.dicom.SOPClass
COLORRESPONSEUNIT - Static variable in class com.pixelmed.convert.TIFFTags
ColorSoftcopyPresentationStateStorage - Static variable in class com.pixelmed.dicom.SOPClass
colorSpaceWasConvertedToRGBDuringDecompression - Variable in class com.pixelmed.dicom.AttributeList
ColorUtilities - Class in com.pixelmed.utils: Various static methods helpful for color conversions.
column - Variable in class com.pixelmed.geometry.GeometryOfSlice
columnArray - Variable in class com.pixelmed.geometry.GeometryOfSlice
columnCount - Variable in class com.pixelmed.database.MapTableModel
columnCount - Variable in class com.pixelmed.dicom.AttributeListTableModel
columnForFrame - Variable in class com.pixelmed.dicom.TiledFramesIndex
columnNames - Variable in class com.pixelmed.database.MapTableModel
columnNames - Variable in class com.pixelmed.dicom.AttributeListTableModel
ColumnPositionInTotalImagePixelMatrix - Static variable in class com.pixelmed.dicom.TagFromName
columns - Variable in class com.pixelmed.convert.RawImageDescription
Columns - Static variable in class com.pixelmed.dicom.TagFromName
columnSpacing - Variable in class com.pixelmed.display.DisplayedAreaSelection
com.pixelmed.anatproc - package com.pixelmed.anatproc: Classes for encapsulating and extracting textutal and coded anatomic information.
com.pixelmed.apps - package com.pixelmed.apps: Various miscellaneous applications.
com.pixelmed.convert - package com.pixelmed.convert: Classes for converting proprietary image formats to DICOM.
com.pixelmed.database - package com.pixelmed.database: Abstracts any underlying database support for applications using the DICOM toolkit and needing access to persistent storage of entities in the DICOM information model.
com.pixelmed.dicom - package com.pixelmed.dicom: Classes for constructing, reading, writing and manipulating DICOM composite objects.
com.pixelmed.display - package com.pixelmed.display: Classes for displaying DICOM composite objects, including images and spectra.
com.pixelmed.display.event - package com.pixelmed.display.event: Classes for processing events related to displaying and navigating through images and spectra.
com.pixelmed.displaywave - package com.pixelmed.displaywave: Classes for displaying ECG waveforms, including DICOM and SCP-ECG files.
com.pixelmed.dose - package com.pixelmed.dose: Classes for encapsulating and extracting radiation dose information.
com.pixelmed.doseocr - package com.pixelmed.doseocr: Classes for extracting radiation dose information from screen images and transforming into Dose SR objects.
com.pixelmed.event - package com.pixelmed.event
com.pixelmed.ftp - package com.pixelmed.ftp: FTP transfer of files.
com.pixelmed.geometry - package com.pixelmed.geometry: Classes for posting localizer and other orthogonal images with projections or intersections of images.
com.pixelmed.network - package com.pixelmed.network: Classes for sending, receiving, querying and retrieving DICOM composite objects on the network, as well as supporting lower level functions.
com.pixelmed.query - package com.pixelmed.query: Encapsulation of DICOM queries into a higher level abstraction that supports creation of a tree model based on the results of a query, and a graphical user interface to that model.
com.pixelmed.scpecg - package com.pixelmed.scpecg: Classes for reading SCP-ECG files.
com.pixelmed.server - package com.pixelmed.server: Implements a DICOM storage server that provides a database, DICOM query and retrieval, and Web Access to DICOM Objects (WADO) .
com.pixelmed.slf4j - package com.pixelmed.slf4j: Implements a thin wrapper around a subset of classes and methods of SLFJ.
com.pixelmed.test - package com.pixelmed.test: Classes for unit testing.
com.pixelmed.transfermonitor - package com.pixelmed.transfermonitor
com.pixelmed.utils - package com.pixelmed.utils: Various miscellaneous utilities, mainly static methods.
com.pixelmed.validate - package com.pixelmed.validate: A package for validating composite instances against the corresponding DICOM standard IOD.
com.pixelmed.web - package com.pixelmed.web: Implements Web Access to DICOM Objects (WADO) as defined in DICOM PS 3.18 (ISO 17432).
combinations - Static variable in class com.pixelmed.anatproc.CombinedAnatomicConcepts
CombinedAnatomicConcepts - Class in com.pixelmed.anatproc: This class supports anatomic concepts that may be combinations of one another.
CombinedAnatomicConcepts() - Constructor for class com.pixelmed.anatproc.CombinedAnatomicConcepts
CommandDataSetType - Static variable in class com.pixelmed.dicom.TagFromName
CommandField - Static variable in class com.pixelmed.dicom.TagFromName
CommandLengthToEnd - Static variable in class com.pixelmed.dicom.TagFromName
commandReceived - Variable in class com.pixelmed.network.CompositeResponseHandler
comment - Variable in class com.pixelmed.dose.CTAcquisitionParameters
CommentsOnThePerformedProcedureStep - Static variable in class com.pixelmed.dicom.TagFromName
CommonConvertedAttributeGeneration - Class in com.pixelmed.convert: A class to support converting proprietary image input format files into images of a specified or appropriate SOP Class.
CommonConvertedAttributeGeneration() - Constructor for class com.pixelmed.convert.CommonConvertedAttributeGeneration
CommonDoseObserverContext - Class in com.pixelmed.dose
CommonDoseObserverContext() - Constructor for class com.pixelmed.dose.CommonDoseObserverContext
CommonDoseObserverContext(String, String, String, String, String, String, String, String, String, String, String, String) - Constructor for class com.pixelmed.dose.CommonDoseObserverContext
commonPortNumbers - Static variable in class com.pixelmed.network.NetworkDefaultValues
CompareSetsOfDicomFiles - Class in com.pixelmed.apps: A class to compare two sets of DICOM files.
CompareSetsOfDicomFiles(String, String) - Constructor for class com.pixelmed.apps.CompareSetsOfDicomFiles
compareStringsThatMayBeIntegers(String, String) - Static method in class com.pixelmed.utils.StringUtilities: Compare strings based on their integer value of they are both integers, otherwise their lexicographic order.
compareStringsWithEmbeddedNonZeroPaddedIntegers(String, String) - Static method in class com.pixelmed.utils.StringUtilities: Compare strings based on the lexicographic order of their values, but accounting for non-zero padded integers.
compareTo(Object) - Method in class com.pixelmed.database.DatabaseTreeRecord: Compare nodes based on the lexicographic order of their string values.
compareTo(Object) - Method in class com.pixelmed.dicom.AttributeTag: Compare tags based on the numeric order of their group and then element values.
compareTo(Object) - Method in class com.pixelmed.dicom.AttributeTreeRecord
compareTo(Object) - Method in class com.pixelmed.dicom.DicomDirectoryRecord
compareTo(Object) - Method in class com.pixelmed.dicom.DicomDirectoryRecordFactory.ConcatenationDirectoryRecord
compareTo(Object) - Method in class com.pixelmed.dicom.DicomDirectoryRecordFactory.HL7StructuredDocumentDirectoryRecord
compareTo(Object) - Method in class com.pixelmed.dicom.DicomDirectoryRecordFactory.ImageDirectoryRecord
compareTo(Object) - Method in class com.pixelmed.dicom.DicomDirectoryRecordFactory.PatientDirectoryRecord
compareTo(Object) - Method in class com.pixelmed.dicom.DicomDirectoryRecordFactory.SeriesDirectoryRecord
compareTo(Object) - Method in class com.pixelmed.dicom.DicomDirectoryRecordFactory.SpectroscopyDirectoryRecord
compareTo(Object) - Method in class com.pixelmed.dicom.DicomDirectoryRecordFactory.StudyDirectoryRecord
compareTo(Object) - Method in class com.pixelmed.dicom.InformationEntity: Is this information entity higher in the model than the specified information entity ?
compareTo(Object) - Method in class com.pixelmed.dicom.SetOfDicomFiles.DicomFile
compareTo(Object) - Method in class com.pixelmed.dose.CTPhantomType
compareTo(Object) - Method in class com.pixelmed.query.QueryTreeRecord: Compare nodes based on the lexicographic order of their string values.
compareTo(Object) - Method in class com.pixelmed.scpecg.SCPTreeRecord
compareToByIntegerValue(DicomDirectoryRecord, boolean) - Method in class com.pixelmed.dicom.DicomDirectoryRecord: Compares this object with the specified directory record for order based on integer value.
compareToByStringValue(DicomDirectoryRecord, boolean) - Method in class com.pixelmed.dicom.DicomDirectoryRecord: Compares this object with the specified directory record for order based on string value.
CompensatorThicknessData - Static variable in class com.pixelmed.dicom.TagFromName
CompensatorTransmissionData - Static variable in class com.pixelmed.dicom.TagFromName
CompileXSLTIntoTranslet - Class in com.pixelmed.validate: make a translet from any XSL-T source file.
CompileXSLTIntoTranslet() - Constructor for class com.pixelmed.validate.CompileXSLTIntoTranslet
COMPLETED - Static variable in class com.pixelmed.display.DicomImageBlackout.StatusNotificationHandler
completedStudiesFolder - Variable in class com.pixelmed.apps.StudyReceiver
CompletionFlag - Static variable in class com.pixelmed.dicom.TagFromName
ComplexImageComponent - Static variable in class com.pixelmed.dicom.TagFromName
component - Variable in class com.pixelmed.display.SafeCursorChanger
CompositeContentItem(ContentItem, AttributeList) - Constructor for class com.pixelmed.dicom.ContentItemFactory.CompositeContentItem
CompositeContentItem(ContentItem, String, CodedSequenceItem, String, String, String, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.CompositeContentItem
CompositeContentItem(ContentItem, String, CodedSequenceItem, String, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.CompositeContentItem
CompositeContentItem(ContentItem, String, String, CodedSequenceItem, String, String, String, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.CompositeContentItem
CompositeContentItem(ContentItem, String, String, CodedSequenceItem, String, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.CompositeContentItem
CompositeInstanceContext - Class in com.pixelmed.dicom: A class for representing the attributes of general modules that describe the patient, study, series, instance and related "context" of the payload of a composite DICOM instance.
CompositeInstanceContext() - Constructor for class com.pixelmed.dicom.CompositeInstanceContext
CompositeInstanceContext(AttributeList, boolean) - Constructor for class com.pixelmed.dicom.CompositeInstanceContext: Create the composite context module Attributes with values from the supplied AttributeList.
compositeInstanceContext - Variable in class com.pixelmed.dicom.ImageLibrary
compositeInstanceContext - Variable in class com.pixelmed.dose.CTDose
CompositeInstanceContext.Selector - Class in com.pixelmed.dicom: A class to select which entities are copied or propagated or removed or not during operations on CompositeInstanceContext.
CompositeInstanceStoreAbstractSyntaxSelectionPolicy - Class in com.pixelmed.network: Accept only SOP Classes for storage of composite instances and verification SOP Classes.
CompositeInstanceStoreAbstractSyntaxSelectionPolicy() - Constructor for class com.pixelmed.network.CompositeInstanceStoreAbstractSyntaxSelectionPolicy
CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy - Class in com.pixelmed.network: Accept only SOP Classes for storage, query or retrieval of composite instances and verification SOP Classes.
CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy() - Constructor for class com.pixelmed.network.CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy
CompositeResponseHandler - Class in com.pixelmed.network: This abstract class provides a mechanism to process each PDU of a composite response as it is received, such as for evaluating the status of the response for success.
CompositeResponseHandler() - Constructor for class com.pixelmed.network.CompositeResponseHandler: Construct a handler to process each PDU of a composite response as it is received, evaluating the status of the response for success.
CompositingPlanarMPRVolumetricPresentationStateStorage - Static variable in class com.pixelmed.dicom.SOPClass
Comprehensive3DSRStorage - Static variable in class com.pixelmed.dicom.SOPClass
ComprehensiveSRStorage - Static variable in class com.pixelmed.dicom.SOPClass
ComprehensiveSRStorageTrialRetired - Static variable in class com.pixelmed.dicom.SOPClass
CompressDicomFiles - Class in com.pixelmed.apps: This class copies a set of DICOM image files, compressing them losslessly with JPEG 2000 (default), JPEG 10918-1 Lossless Huffman SV1, JPEG-LS or RLE.
CompressDicomFiles(MessageLogger) - Constructor for class com.pixelmed.apps.CompressDicomFiles
compressed - Variable in class com.pixelmed.convert.AnalyzeHeader
CompressedFrameDecoder - Class in com.pixelmed.dicom: The CompressedFrameDecoder class implements decompression of selected frames in various supported Transfer Syntaxes once already extracted from DICOM encapsulated images.
CompressedFrameDecoder(String, int, int, int, int, ColorSpace) - Constructor for class com.pixelmed.dicom.CompressedFrameDecoder
CompressedFrameDecoder(String, int, int, int, int, ColorSpace, boolean) - Constructor for class com.pixelmed.dicom.CompressedFrameDecoder
CompressedFrameDecoder(String, ByteFrameSource, int, int, int, int, ColorSpace) - Constructor for class com.pixelmed.dicom.CompressedFrameDecoder
CompressedFrameDecoder(String, ByteFrameSource, int, int, int, int, ColorSpace, boolean) - Constructor for class com.pixelmed.dicom.CompressedFrameDecoder
CompressedFrameDecoder(String, byte[][], int, int, int, int, ColorSpace) - Constructor for class com.pixelmed.dicom.CompressedFrameDecoder
CompressedFrameDecoder(String, byte[][], int, int, int, int, ColorSpace, boolean) - Constructor for class com.pixelmed.dicom.CompressedFrameDecoder
CompressedFrameDecoder.ByteArrayInputStreamWithOffsetCounterAndOurMethods - Class in com.pixelmed.dicom
CompressedFrameEncoder - Class in com.pixelmed.dicom: The CompressedFrameEncoder class implements compression of specified frames in various supported Transfer Syntaxes, which can then be incorporated in DICOM encapsulated images.
CompressedFrameEncoder() - Constructor for class com.pixelmed.dicom.CompressedFrameEncoder
COMPRESSION - Static variable in class com.pixelmed.convert.TIFFTags
compressionRatio - Variable in class com.pixelmed.dicom.AttributeList
compute2DInPlaneBoundingBoxForSegments(AttributeList) - Method in class com.pixelmed.apps.ShrinkSegmentationToBoundingBox
COMPUTED_FROM_IMAGE_ATTRIBUTES - Static variable in class com.pixelmed.dose.SourceOfDoseInformation
ComputedRadiographyImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
computePixelMessageDigestFromFrames(File) - Method in class com.pixelmed.apps.PixelMessageDigest
computeRowAndColumnForFrame() - Method in class com.pixelmed.dicom.TiledFramesIndex
concatenate(byte[], int, int, byte[], int, int) - Static method in class com.pixelmed.utils.ByteArray: Concatenate portions of two byte arrays into a new byte array.
concatenate(byte[], byte[]) - Static method in class com.pixelmed.utils.ByteArray: Concatenate the entire contents of two byte arrays into a new byte array.
CONCATENATION - Static variable in class com.pixelmed.dicom.InformationEntity
ConcatenationFrameOffsetNumber - Static variable in class com.pixelmed.dicom.TagFromName
ConcatenationUID - Static variable in class com.pixelmed.dicom.TagFromName
concatentation - Static variable in class com.pixelmed.dicom.DicomDirectoryRecordType
Concept - Class in com.pixelmed.anatproc: This class represents a concept that is uniquely identifiable.
Concept(String) - Constructor for class com.pixelmed.anatproc.Concept: Create a concept.
Concept() - Constructor for class com.pixelmed.anatproc.Concept
conceptCode - Variable in class com.pixelmed.dicom.ContentItemFactory.CodeContentItem
ConceptCodeSequence - Static variable in class com.pixelmed.dicom.TagFromName
conceptEntries - Variable in class com.pixelmed.anatproc.DictionaryOfConcepts
conceptIdentifier - Variable in class com.pixelmed.anatproc.CodedConcept
conceptIdentifierToConceptEntries - Variable in class com.pixelmed.anatproc.DictionaryOfConcepts
conceptName - Variable in class com.pixelmed.dicom.ContentItemWithValue
ConceptNameCodeSequence - Static variable in class com.pixelmed.dicom.TagFromName
conceptUniqueIdentifier - Variable in class com.pixelmed.anatproc.Concept
conceptUniqueIdentifierToConceptEntries - Variable in class com.pixelmed.anatproc.DictionaryOfConcepts
CONEBEAM - Static variable in class com.pixelmed.dose.CTScanType
ConfigureActionListener() - Constructor for class com.pixelmed.apps.DoseUtility.ConfigureActionListener
ConfigureActionListener() - Constructor for class com.pixelmed.apps.DownloadOrTransmit.ConfigureActionListener
ConfigureActionListener() - Constructor for class com.pixelmed.display.DicomCleaner.ConfigureActionListener
configureButtonLabel - Static variable in class com.pixelmed.apps.DoseUtility
configureButtonLabel - Static variable in class com.pixelmed.apps.DownloadOrTransmit
configureButtonToolTipText - Static variable in class com.pixelmed.apps.DoseUtility
configureButtonToolTipText - Static variable in class com.pixelmed.apps.DownloadOrTransmit
CONSECUTIVEBADFAXLINES - Static variable in class com.pixelmed.convert.TIFFTags
ConsentForClinicalTrialUseSequence - Static variable in class com.pixelmed.dicom.TagFromName
constructCrossSectionalImageLibraryEntry(HierarchicalImageReference, String, GeometryOfSlice) - Method in class com.pixelmed.dicom.CrossSectionalImageLibrary.CrossSectionalImageLibraryEntry
constructImageLibrary(ContentItem, AttributeList) - Method in class com.pixelmed.dicom.ImageLibrary: Construct an Image Library by extracting it from an existing DICOM SR instance.
constructImageLibraryEntry(HierarchicalImageReference) - Method in class com.pixelmed.dicom.ImageLibrary.ImageLibraryEntry
constructOnlyQualifier(CodedSequenceItem) - Method in class com.pixelmed.dicom.ContentItemFactory.NumericContentItem
constructProjectionXRayImageLibraryEntry(HierarchicalImageReference, CodedSequenceItem, CodedSequenceItem, CodedSequenceItem, CodedSequenceItem, String, String, String, String, String, String, String, String, String, String) - Method in class com.pixelmed.dicom.ProjectionXRayImageLibrary.ProjectionXRayImageLibraryEntry
ConsultingPhysicianIdentificationSequence - Static variable in class com.pixelmed.dicom.TagFromName
ConsultingPhysicianName - Static variable in class com.pixelmed.dicom.TagFromName
ConsumerFormatImageMaker - Class in com.pixelmed.display: A class of static methods to make consumer format images from DICOM images.
ConsumerFormatImageMaker() - Constructor for class com.pixelmed.display.ConsumerFormatImageMaker
ContainerContentItem(ContentItem, AttributeList) - Constructor for class com.pixelmed.dicom.ContentItemFactory.ContainerContentItem
ContainerContentItem(ContentItem, String, CodedSequenceItem, boolean, String, String, String, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.ContainerContentItem
ContainerContentItem(ContentItem, String, CodedSequenceItem, boolean, String, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.ContainerContentItem
ContainerContentItem(ContentItem, String, CodedSequenceItem, boolean) - Constructor for class com.pixelmed.dicom.ContentItemFactory.ContainerContentItem
ContainerContentItem(ContentItem, String, CodedSequenceItem) - Constructor for class com.pixelmed.dicom.ContentItemFactory.ContainerContentItem
ContainerIdentifier - Static variable in class com.pixelmed.dicom.TagFromName
contains(String, String[]) - Static method in class com.pixelmed.utils.StringUtilities: Does a string contain any one of an array of strings ?
containsLastCommandFragment() - Method in class com.pixelmed.network.PDataPDU
containsLastDataFragment() - Method in class com.pixelmed.network.PDataPDU
containsOverlay(AttributeList) - Static method in class com.pixelmed.apps.PseudonymizeAndSequester
containsRegardlessOfCase(String, String[]) - Static method in class com.pixelmed.utils.StringUtilities: Does a string contain any one of an array of strings regardless of case ?
ContentCreatorIdentificationCodeSequence - Static variable in class com.pixelmed.dicom.TagFromName
contentCreatorName - Variable in class com.pixelmed.dicom.ColorPalette
ContentCreatorName - Static variable in class com.pixelmed.dicom.TagFromName
contentCreatorNameStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotIron
contentCreatorNameStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotMetalBlue
contentCreatorNameStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET
contentCreatorNameStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET20Step
contentDate - Variable in class com.pixelmed.dicom.ProjectionXRayImageLibrary.ProjectionXRayImageLibraryEntry
ContentDate - Static variable in class com.pixelmed.dicom.TagFromName
contentDescription - Variable in class com.pixelmed.dicom.ColorPalette
ContentDescription - Static variable in class com.pixelmed.dicom.TagFromName
contentDescriptionStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotIron
contentDescriptionStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotMetalBlue
contentDescriptionStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET
contentDescriptionStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET20Step
ContentItem - Class in com.pixelmed.dicom: An abstract class for representing a node in an internal representation of a structured reporting tree (an instance of StructuredReport).
ContentItem(ContentItem, AttributeList) - Constructor for class com.pixelmed.dicom.ContentItem: Construct a content item for a list of attributes, and add it as a child of the specified parent.
ContentItem(ContentItem, String, String, String) - Constructor for class com.pixelmed.dicom.ContentItem: Construct a content item of a specified type and relationship, creating a new AttributeList, and add it as a child of the specified parent.
ContentItem(ContentItem, String) - Constructor for class com.pixelmed.dicom.ContentItem: Construct a content item of a specified type and relationship, creating a new AttributeList, and add it as a child of the specified parent.
ContentItemFactory - Class in com.pixelmed.dicom: A class with methods for constructing a ContentItem of the appropriate class from a list of attributes.
ContentItemFactory() - Constructor for class com.pixelmed.dicom.ContentItemFactory
contentItemFactory - Variable in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
contentItemFactory - Variable in class com.pixelmed.dicom.XMLRepresentationOfStructuredReportObjectFactory
ContentItemFactory.CodeContentItem - Class in com.pixelmed.dicom
ContentItemFactory.CompositeContentItem - Class in com.pixelmed.dicom
ContentItemFactory.ContainerContentItem - Class in com.pixelmed.dicom
ContentItemFactory.DateContentItem - Class in com.pixelmed.dicom
ContentItemFactory.DateTimeContentItem - Class in com.pixelmed.dicom
ContentItemFactory.ImageContentItem - Class in com.pixelmed.dicom
ContentItemFactory.NumericContentItem - Class in com.pixelmed.dicom
ContentItemFactory.PersonNameContentItem - Class in com.pixelmed.dicom
ContentItemFactory.SpatialCoordinates3DContentItem - Class in com.pixelmed.dicom
ContentItemFactory.SpatialCoordinatesContentItem - Class in com.pixelmed.dicom
ContentItemFactory.StringContentItem - Class in com.pixelmed.dicom
ContentItemFactory.TemporalCoordinatesContentItem - Class in com.pixelmed.dicom
ContentItemFactory.TextContentItem - Class in com.pixelmed.dicom
ContentItemFactory.TimeContentItem - Class in com.pixelmed.dicom
ContentItemFactory.UIDContentItem - Class in com.pixelmed.dicom
ContentItemFactory.UnrecognizedContentItem - Class in com.pixelmed.dicom
ContentItemFactory.WaveformContentItem - Class in com.pixelmed.dicom
contentItemFragment - Variable in class com.pixelmed.dose.CTAcquisitionParameters
contentItemFragment - Variable in class com.pixelmed.dose.CTDoseAcquisition
contentItemIdentiferPrefix - Static variable in class com.pixelmed.dicom.XMLRepresentationOfStructuredReportObjectFactory
contentItemIdentifiersByContentItem - Variable in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
ContentItemModifierSequence - Static variable in class com.pixelmed.dicom.TagFromName
contentItemNameMatchesCodeValueAndCodingSchemeDesignator(String, String) - Method in class com.pixelmed.dicom.ContentItem: Test if the coded concept name of the content item matches the specified code value and coding scheme designator.
contentItemNameMatchesCodeValueAndCodingSchemeDesignator(ContentItem, String, String) - Static method in class com.pixelmed.dicom.ContentItem: Test if the coded concept name of the content item matches the specified code value and coding scheme designator.
contentItemNameMatchesCodeValueAndCodingSchemeDesignator(String, String) - Method in class com.pixelmed.dicom.ContentItemWithReference
contentItemNameMatchesCodeValueAndCodingSchemeDesignator(String, String) - Method in class com.pixelmed.dicom.ContentItemWithValue
contentItemValueMatchesCodeValueAndCodingSchemeDesignator(String, String) - Method in class com.pixelmed.dicom.ContentItemFactory.CodeContentItem: Test if the coded value of the code content item matches the specified code value and coding scheme designator.
ContentItemWithReference - Class in com.pixelmed.dicom: An abstract class for representing a node in an internal representation of a structured reporting tree (an instance of StructuredReport).
ContentItemWithReference(ContentItem, AttributeList) - Constructor for class com.pixelmed.dicom.ContentItemWithReference: Construct a content item for a list of attributes, and add it as a child of the specified parent.
ContentItemWithReference(ContentItem, String, String) - Constructor for class com.pixelmed.dicom.ContentItemWithReference: Construct a content item of a specified type and relationship, creating a new AttributeList, and add it as a child of the specified parent.
ContentItemWithValue - Class in com.pixelmed.dicom: An abstract class for representing a node in an internal representation of a structured reporting tree (an instance of StructuredReport).
ContentItemWithValue(ContentItem, AttributeList) - Constructor for class com.pixelmed.dicom.ContentItemWithValue: Construct a content item for a list of attributes, and add it as a child of the specified parent.
ContentItemWithValue(ContentItem, String, String, CodedSequenceItem, String, String) - Constructor for class com.pixelmed.dicom.ContentItemWithValue: Construct a content item of a specified type and relationship, creating a new AttributeList, and add it as a child of the specified parent.
ContentItemWithValue(ContentItem, String, String, CodedSequenceItem) - Constructor for class com.pixelmed.dicom.ContentItemWithValue: Construct a content item of a specified type and relationship, creating a new AttributeList, and add it as a child of the specified parent.
contentLabel - Variable in class com.pixelmed.dicom.ColorPalette
ContentLabel - Static variable in class com.pixelmed.dicom.TagFromName
contentLabelStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotIron
contentLabelStatic - Static variable in class com.pixelmed.dicom.ColorPaletteHotMetalBlue
contentLabelStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET
contentLabelStatic - Static variable in class com.pixelmed.dicom.ColorPalettePET20Step
ContentQualification - Static variable in class com.pixelmed.dicom.TagFromName
ContentSequence - Static variable in class com.pixelmed.dicom.TagFromName
ContentTemplateSequence - Static variable in class com.pixelmed.dicom.TagFromName
contentTime - Variable in class com.pixelmed.dicom.ProjectionXRayImageLibrary.ProjectionXRayImageLibraryEntry
ContentTime - Static variable in class com.pixelmed.dicom.TagFromName
ContextGroupExtensionCreatorUID - Static variable in class com.pixelmed.dicom.TagFromName
ContextGroupIdentificationSequence - Static variable in class com.pixelmed.dicom.TagFromName
continuityOfContent - Variable in class com.pixelmed.dicom.ContentItemFactory.ContainerContentItem
ContinuityOfContent - Static variable in class com.pixelmed.dicom.TagFromName
ContourData - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusAdministrationRouteSequence - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusAgent - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusAgentPhase - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusAgentSequence - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusIngredient - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusIngredientConcentration - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusRoute - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusStartTime - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusStopTime - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusTotalDose - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusUsageSequence - Static variable in class com.pixelmed.dicom.TagFromName
ContrastBolusVolume - Static variable in class com.pixelmed.dicom.TagFromName
ContrastFlowDuration - Static variable in class com.pixelmed.dicom.TagFromName
ContrastFlowRate - Static variable in class com.pixelmed.dicom.TagFromName
ContributingEquipmentSequence - Static variable in class com.pixelmed.dicom.TagFromName
ContributionDescription - Static variable in class com.pixelmed.dicom.TagFromName
ConversionSourceAttributesSequence - Static variable in class com.pixelmed.dicom.TagFromName
ConversionType - Static variable in class com.pixelmed.dicom.TagFromName
Convert8To16Bits - Class in com.pixelmed.apps: A class of methods to convert 8 to 16 bit gray scale images.
Convert8To16Bits(String, String, int) - Constructor for class com.pixelmed.apps.Convert8To16Bits: Read a DICOM 8 bit grayscale image input format file and change the bit depth.
convertAmicasFiles(String, String) - Method in class com.pixelmed.convert.ConvertAmicasJPEG2000FilesetToDicom: Read an amicas-patients folder, and then convert any image files within.
ConvertAmicasJPEG2000FilesetToDicom - Class in com.pixelmed.convert: This class provides conversion of a set of Amicas JPEG 2000 files to DICOM.
ConvertAmicasJPEG2000FilesetToDicom() - Constructor for class com.pixelmed.convert.ConvertAmicasJPEG2000FilesetToDicom: Construct an converter that will looked for files in the system default path.
ConvertAmicasJPEG2000FilesetToDicom(String) - Constructor for class com.pixelmed.convert.ConvertAmicasJPEG2000FilesetToDicom: Construct an converter that will looked for files in the specified path.
ConvertAmicasJPEG2000FilesetToDicom.OnlyDirectoriesFileFilter - Class in com.pixelmed.convert: Instances of this class select only Files that are directories.
ConvertAmicasJPEG2000FilesetToDicom.OnlySuffixFilenameFilter - Class in com.pixelmed.convert: Instances of this class select only File names that end with the specified suffix.
convertFileToEightBitImage(String, String, String) - Static method in class com.pixelmed.display.ConsumerFormatImageMaker: Read a DICOM image input file, and create single frame 8-bit per channel images (windowed if grayscale) from the only or all frames.
convertFileToEightBitImage(String, String, String, double, double, int, int, int, String) - Static method in class com.pixelmed.display.ConsumerFormatImageMaker: Read a DICOM image input file, and create single frame 8-bit per channel images (windowed if grayscale) from the only or all frames.
convertFileToEightBitImage(String, String, String, double, double, int, int, int, int, int, int, int, int, int, String) - Static method in class com.pixelmed.display.ConsumerFormatImageMaker: Read a DICOM image input file, and create single frame 8-bit per channel images (windowed if grayscale) from the only or all frames.
convertFileToEightBitImage(String, String, String, double, double, int, int, int, String, Vector<SuperimposedImage>, double, Vector<Shape>[]) - Static method in class com.pixelmed.display.ConsumerFormatImageMaker: Read a DICOM image input file, and create single frame 8-bit per channel images (windowed if grayscale) from the only or all frames.
convertFileToEightBitImage(String, String, String, double, double, int, int, int, String, Vector<SuperimposedImage>, Vector<Shape>[]) - Static method in class com.pixelmed.display.ConsumerFormatImageMaker: Read a DICOM image input file, and create single frame 8-bit per channel images (windowed if grayscale) from the only or all frames.
convertFileToEightBitImage(String, String, String, double, double, int, int, int, int, int, int, int, int, int, String, Vector<SuperimposedImage>, Vector<Shape>[]) - Static method in class com.pixelmed.display.ConsumerFormatImageMaker: Read a DICOM image input file, and create single frame 8-bit per channel images (windowed if grayscale) from the only or all frames.
convertFileToEightBitImage(String, String, String, double, double, int, int, int, int, int, int, int, int, int, String, Vector<SuperimposedImage>, double, Vector<Shape>[]) - Static method in class com.pixelmed.display.ConsumerFormatImageMaker: Read a DICOM image input file, and create single frame 8-bit per channel images (windowed if grayscale) from the only or all frames.
convertGenericLateralityToBreastSpecificLaterality(DisplayableLateralityConcept) - Static method in class com.pixelmed.anatproc.MammographyLaterality
convertGenericLateralityToBreastSpecificLaterality(CodedSequenceItem) - Static method in class com.pixelmed.anatproc.MammographyLaterality
convertImages(Set<File>, File) - Static method in class com.pixelmed.dicom.MultiFrameImageFactory: Create a new set of instances, converting to enhanced images when possible, from a set of DICOM files.
convertImages(File[], File) - Static method in class com.pixelmed.dicom.MultiFrameImageFactory: Create a new set of instances, converting to enhanced images when possible, from a set of DICOM files.
convertImages(String[], String) - Static method in class com.pixelmed.dicom.MultiFrameImageFactory: Create a new set of instances, converting to enhanced images when possible, from a set of DICOM files.
ConvertNonRGBToRGB - Class in com.pixelmed.apps: A class of static methods to convert non-RGB (e.g., YBR_FULL) to RGB true color images.
ConvertNonRGBToRGB(String, String) - Constructor for class com.pixelmed.apps.ConvertNonRGBToRGB: Read a DICOM color image input format file and change the photometric interpretation of the the encoded pixel data to RGB.
ConvertPaletteColorToGrayscale - Class in com.pixelmed.apps: A class of static methods to convert PALETTE COLOR to MONOCHROME2 images.
ConvertPaletteColorToGrayscale(String, String) - Constructor for class com.pixelmed.apps.ConvertPaletteColorToGrayscale: Read a DICOM image input format file with a Photometric Interpretation of PALETTE COLOR, and from it create a DICOM image of Photometric Interpretation MONOCHROME2.
ConvertPlanarConfiguration - Class in com.pixelmed.apps: A class of static methods to convert the planar configuration of a multiple samples per pixel image, i.e., to change color-by-plane to color-by-pixel or vice versa.
ConvertPlanarConfiguration(String, String) - Constructor for class com.pixelmed.apps.ConvertPlanarConfiguration: Read a DICOM color image input format file and change the planar configuration of the encoded pixel data.
ConvertSRTCodesToSCT - Class in com.pixelmed.apps: A class to convert all SRT codes to SCT codes.
ConvertSRTCodesToSCT(String[], String) - Constructor for class com.pixelmed.apps.ConvertSRTCodesToSCT: Examine a set of SR files and copy them converting SRT codes to SCT codes (per CP 1850).
ConvertSRTCodesToSCT.OurMediaImporter - Class in com.pixelmed.apps
convertSRTToSCTInThisItem(AttributeList) - Method in class com.pixelmed.apps.ConvertSRTCodesToSCT: Convert SRT codes to SCT codes (per CP 1850) in this ItemList.
convertToMostFavorableImageType(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities
convertToMostFavorableImageTypeWithBandCombineOp(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities
convertToMostFavorableImageTypeWithDataBufferCopy(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities
convertToMostFavorableImageTypeWithGraphicsDraw(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities
convertToMostFavorableImageTypeWithPixelCopy(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities
convertToThreeChannelImageTypeIfFour(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities
convertYBRToRGB(byte, byte, byte, byte[]) - Static method in class com.pixelmed.display.BufferedImageUtilities
convertYBRToRGB(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities
ConvolutionKernel - Static variable in class com.pixelmed.dicom.TagFromName
CoordinateCategoryMammoBreastDensity - Static variable in class com.pixelmed.dicom.SpatialCoordinateAndImageReference
CoordinateCategoryMammoCalcificationCluster - Static variable in class com.pixelmed.dicom.SpatialCoordinateAndImageReference
CoordinateCategoryMammoIndividualCalcification - Static variable in class com.pixelmed.dicom.SpatialCoordinateAndImageReference
CoordinateCategoryUnspecified - Static variable in class com.pixelmed.dicom.SpatialCoordinateAndImageReference
COPIED_FROM_IMAGE_ATTRIBUTES - Static variable in class com.pixelmed.dose.SourceOfDoseInformation
copy(int, InputStream, OutputStream, long) - Static method in class com.pixelmed.utils.CopyStream: Copy the specified number of bytes from the current position of the input stream to an output stream.
copy(InputStream, OutputStream, long) - Static method in class com.pixelmed.utils.CopyStream: Copy the specified number of bytes from the current position of the input stream to an output stream.
copy(int, InputStream, OutputStream) - Static method in class com.pixelmed.utils.CopyStream: Copy an entire input stream to an output stream.
copy(InputStream, OutputStream) - Static method in class com.pixelmed.utils.CopyStream: Copy an entire input stream to an output stream.
copy(File, File, int, int, int) - Static method in class com.pixelmed.utils.CopyStream: Copy an entire input file to an output file.
copy(String, String, int, int, int) - Static method in class com.pixelmed.utils.CopyStream: Copy an entire input file to an output file.
copy(File, File) - Static method in class com.pixelmed.utils.CopyStream: Copy an entire input file to an output file.
copy(String, String) - Static method in class com.pixelmed.utils.CopyStream: Copy an entire input file to an output file.
copyByteSwapped(int, InputStream, OutputStream, long) - Static method in class com.pixelmed.utils.CopyStream: Copy the specified even number of bytes from the current position of the input stream to an output stream, swapping adjacent pairs of bytes.
copyByteSwapped(InputStream, OutputStream, long) - Static method in class com.pixelmed.utils.CopyStream: Copy the specified even number of bytes from the current position of the input stream to an output stream, swapping adjacent pairs of bytes.
copyFloatToDoubleArray(float[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of float values into an array of double.
copyFromOriginalToCleanedPerformingAction(Vector, Date, MessageLogger, SafeProgressBarUpdaterThread) - Method in class com.pixelmed.display.DicomCleaner
copyFunctionalGroupsSequenceWithDownsampledValues(AttributeList, AttributeList, TiledFramesIndex, int, int, int, int, int, int) - Static method in class com.pixelmed.apps.TiledPyramid
CopyOnlyHeadOfMultipleStructuredReportsAndReferences - Class in com.pixelmed.apps: A class to process multiple SR files and their referenced instances (like Presentation States and Segmentations) and copy only the head (most recent) of the Predecessor Documents sequence chain and its references, ignoring earlier (obsolete) SR files and earlier references.
CopyOnlyHeadOfMultipleStructuredReportsAndReferences(String[], String) - Constructor for class com.pixelmed.apps.CopyOnlyHeadOfMultipleStructuredReportsAndReferences: Copy only the most recent SR files and their references.
CopyOnlyHeadOfMultipleStructuredReportsAndReferences.OurMediaImporter - Class in com.pixelmed.apps
COPYRIGHT - Static variable in class com.pixelmed.convert.TIFFTags
copySignedIntToDoubleArray(int[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in int, into an array of double.
copySignedIntToFloatArray(int[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in int, into an array of float.
copySignedIntToLongArray(int[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in int, into an array of long.
copySignedIntToShortArray(int[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in int, into an array of short.
copySignedLongToDoubleArray(long[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in long, into an array of double.
copySignedLongToFloatArray(long[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in long, into an array of float.
copySignedLongToIntArray(long[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in long, into an array of int.
copySignedLongToShortArray(long[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in long, into an array of short.
copySignedShortToDoubleArray(short[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in short, into an array of double.
copySignedShortToFloatArray(short[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in short, into an array of float.
copySignedShortToIntArray(short[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in short, into an array of int.
copySignedShortToLongArray(short[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of signed values in short, into an array of long.
CopyStream - Class in com.pixelmed.utils: A class for copying an entire input stream to an output stream.
copyStringArrayRemovingLeadingAndTrailingPadding(String[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy a string removing leading and trailing padding.
copyStringToDoubleArray(String[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Extract decimal values from an array of strings into an array of double.
copyStringToFloatArray(String[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Extract decimal values from an array of strings into an array of float.
copyStringToIntArray(String[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Extract integer values from an array of strings into an array of int.
copyStringToLongArray(String[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Extract long values from an array of strings into an array of int.
copyStringToShortArray(String[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Extract short values from an array of strings into an array of short.
copyUnsignedIntToDoubleArray(int[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in int, into an array of double.
copyUnsignedIntToFloatArray(int[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in int, into an array of float.
copyUnsignedIntToLongArray(int[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in int, into an array of long.
copyUnsignedIntToShortArray(int[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in int, into an array of short.
copyUnsignedLongToDoubleArray(long[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in long, into an array of double.
copyUnsignedLongToFloatArray(long[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in long, into an array of float.
copyUnsignedLongToIntArray(long[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in long, into an array of int.
copyUnsignedLongToShortArray(long[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in long, into an array of short.
copyUnsignedShortToDoubleArray(short[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in short, into an array of double.
copyUnsignedShortToFloatArray(short[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in short, into an array of float.
copyUnsignedShortToIntArray(short[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in short, into an array of int.
copyUnsignedShortToLongArray(short[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Copy an array of unsigned values in short, into an array of long.
CornealTopographyMapStorage - Static variable in class com.pixelmed.dicom.SOPClass
CORONAL_LABEL - Static variable in class com.pixelmed.dicom.DescriptionFactory
correctDecompressedImagePixelModule(boolean) - Method in class com.pixelmed.dicom.AttributeList: Correct the PhotometricInterpretation and Planar Configuration iff pixel data in a compressed input transfer syntax was actually decompressed during reading of AttributeList or will be if compressed frames are decompressed.
correctDecompressedImagePixelModule() - Method in class com.pixelmed.dicom.AttributeList: Correct the PhotometricInterpretation and Planar Configuration iff pixel data in a compressed input transfer syntax was actually decompressed during reading of AttributeList or will be if compressed frames are decompressed.
CorrectedImage - Static variable in class com.pixelmed.dicom.TagFromName
correctImageOrientationPatient(AttributeList, int, boolean) - Static method in class com.pixelmed.apps.RotateFlipSetOfImages
correctPatientOrientation(AttributeList, int, boolean) - Static method in class com.pixelmed.apps.RotateFlipSetOfImages
count - Variable in class com.pixelmed.dicom.CompressedFrameDecoder.ByteArrayInputStreamWithOffsetCounterAndOurMethods
countUp(int) - Method in class com.pixelmed.transfermonitor.TransferMonitor
countUp(long) - Method in class com.pixelmed.transfermonitor.TransferMonitor
createAdditionalIndexes() - Method in class com.pixelmed.database.DatabaseInformationModel: Create any additional indexes to optimize queries, for example for UIDs.
createAdditionalIndexes() - Method in class com.pixelmed.database.MinimalPatientStudySeriesInstanceModel: Create additional indexes on UIDs to optimize queries.
createAdditionalIndexes() - Method in class com.pixelmed.database.PatientStudySeriesConcatenationInstanceModel: Create additional indexes on UIDs to optimize queries.
createBandInterleavedByteThreeComponentColorImage(int, int, byte[], int, ColorSpace) - Static method in class com.pixelmed.display.SourceImage
createBandInterleavedShortThreeComponentColorImage(int, int, short[], int, ColorSpace) - Static method in class com.pixelmed.display.SourceImage
createByteGrayscaleImage(int, int, byte[], int) - Static method in class com.pixelmed.display.SourceImage
createCineSliderIfNecessary(int, int, int) - Method in class com.pixelmed.display.DicomImageBlackout
createContextForNewRadiationDoseStructuredReportFromExistingInstance(AttributeList, CTDose, CTIrradiationEventDataFromImages) - Static method in class com.pixelmed.doseocr.GenerateRadiationDoseStructuredReport
createDicomImageFileFromAmicasImageFile(File, String, String, String, AttributeList, AttributeList, AttributeList, AttributeList) - Method in class com.pixelmed.convert.ConvertAmicasJPEG2000FilesetToDicom
createDICOMInstance(String, String, String) - Method in class com.pixelmed.dicom.ColorPalette: Create a DICOM color palette storage instance from the palette characteristics.
createDocumentAndWriteIt(AttributeList, OutputStream) - Static method in class com.pixelmed.dicom.JSONRepresentationOfDicomObjectFactory: Serialize a JSON document created from a DICOM attribute list.
createDocumentAndWriteIt(AttributeList, File) - Static method in class com.pixelmed.dicom.JSONRepresentationOfDicomObjectFactory: Serialize a JSON document created from a DICOM attribute list.
createDocumentAndWriteIt(AttributeList, String) - Static method in class com.pixelmed.dicom.JSONRepresentationOfDicomObjectFactory: Serialize a JSON document created from a DICOM attribute list.
createDocumentAndWriteIt(AttributeList, OutputStream) - Static method in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory: Serialize a JSON document created from a DICOM Structured Report.
createDocumentAndWriteIt(StructuredReport, OutputStream) - Static method in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory: Serialize a JSON document created from a DICOM Structured Report.
createDocumentAndWriteIt(StructuredReport, AttributeList, OutputStream) - Static method in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory: Serialize a JSON document created from a DICOM attribute list.
createDocumentAndWriteIt(StructuredReport, AttributeList, File) - Static method in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory: Serialize a JSON document created from a DICOM attribute list.
createDocumentAndWriteIt(StructuredReport, AttributeList, String) - Static method in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory: Serialize a JSON document created from a DICOM attribute list.
createDocumentAndWriteIt(AttributeList, OutputStream) - Static method in class com.pixelmed.dicom.XMLRepresentationOfDicomObjectFactory: Serialize an XML document (DOM tree) created from a DICOM attribute list.
createDocumentAndWriteIt(AttributeList, OutputStream) - Static method in class com.pixelmed.dicom.XMLRepresentationOfStructuredReportObjectFactory: Serialize an XML document (DOM tree) created from a DICOM Structured Report.
createDocumentAndWriteIt(StructuredReport, OutputStream) - Static method in class com.pixelmed.dicom.XMLRepresentationOfStructuredReportObjectFactory: Serialize an XML document (DOM tree) created from a DICOM Structured Report.
createDocumentAndWriteIt(StructuredReport, AttributeList, OutputStream) - Static method in class com.pixelmed.dicom.XMLRepresentationOfStructuredReportObjectFactory: Serialize an XML document (DOM tree) created from a DICOM Structured Report.
createDoubleGrayscaleImage(int, int, double[], int) - Static method in class com.pixelmed.display.SourceImage
createDownsampledDICOMAttributes(AttributeList, AttributeList, TiledFramesIndex, String, boolean, boolean) - Static method in class com.pixelmed.apps.TiledPyramid
createDownsampledDICOMFile(File, File) - Method in class com.pixelmed.apps.TiledPyramid
createEmptyBufferedImageOfSameTypeAndSize(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities
createEnhancedImageFromFrameSet(FrameSet, Map<String, File>, Map<String, AttributeList>, Map<String, HierarchicalImageReference>, Map<String, StackOfSlices>, boolean, boolean) - Static method in class com.pixelmed.dicom.MultiFrameImageFactory: Create an enhanced image from a set of DICOM single image files or AttributeLists in a FrameSet.
createEnhancedImageFromFrameSet(FrameSet, Map<String, File>, Map<String, AttributeList>, Map<String, HierarchicalImageReference>, boolean, boolean) - Static method in class com.pixelmed.dicom.MultiFrameImageFactory: Create an enhanced image from a set of DICOM single image files or AttributeLists in a FrameSet.
createEnhancedImageFromFrameSet(FrameSet, File, Map<String, File>, Map<String, HierarchicalImageReference>, Map<String, StackOfSlices>, boolean, boolean) - Static method in class com.pixelmed.dicom.MultiFrameImageFactory: Create an enhanced image from a set of DICOM single image files in a FrameSet.
createEnhancedImageFromFrameSet(FrameSet, File, Map<String, File>, Map<String, HierarchicalImageReference>, boolean, boolean) - Static method in class com.pixelmed.dicom.MultiFrameImageFactory: Create an enhanced image from a set of DICOM single image files in a FrameSet.
createExcludeLists() - Method in class com.pixelmed.dicom.DicomDirectoryBrowser
createFloatGrayscaleImage(int, int, float[], int) - Static method in class com.pixelmed.display.SourceImage
createFullNameByTag() - Method in class com.pixelmed.dicom.DicomDictionary
createFullNameByTag() - Method in class com.pixelmed.dicom.DicomDictionaryBase: Concrete sub-classes implement this method to create a map of attribute full names from tags for each tag in the dictionary.
createFunctionalGroupsIfNotPresent(AttributeList, int) - Static method in class com.pixelmed.dicom.FunctionalGroupUtilities: Create shared and per-frame functional group sequences if not already present.
createGUI() - Method in class com.pixelmed.display.ApplicationFrame: Do what is necessary to build an application window.
createGUI(String, int, int, boolean, boolean, boolean, String) - Method in class com.pixelmed.display.DialogMessageLogger: Construct the GUI for a slf4jlogger.
createInformationEntityByTag() - Method in class com.pixelmed.dicom.DicomDictionary
createInformationEntityByTag() - Method in class com.pixelmed.dicom.DicomDictionaryBase: Concrete sub-classes implement this method to create a map of information entities for each tag in the dictionary.
createNameByTag() - Method in class com.pixelmed.dicom.DicomDictionary
createNameByTag() - Method in class com.pixelmed.dicom.DicomDictionaryBase: Concrete sub-classes implement this method to create a map of attribute names from tags for each tag in the dictionary.
createNewAssociation(String, int, String, String, int, int, int, LinkedList, LinkedList, boolean, String, String) - Static method in class com.pixelmed.network.AssociationFactory: Opens a transport connection and initiates an association.
createNewAssociation(String, int, String, String, LinkedList, LinkedList, boolean) - Static method in class com.pixelmed.network.AssociationFactory: Opens a transport connection and initiates an association.
createNewAssociation(String, int, String, String, LinkedList, LinkedList, boolean, String, String) - Static method in class com.pixelmed.network.AssociationFactory: Opens a transport connection and initiates an association.
createNewAssociation(Socket, String, int, int, int, PresentationContextSelectionPolicy) - Static method in class com.pixelmed.network.AssociationFactory: Accepts an association on the supplied open transport connection.
createNewAssociation(Socket, String, PresentationContextSelectionPolicy) - Static method in class com.pixelmed.network.AssociationFactory: Accepts an association on the supplied open transport connection.
createNewPresentationContextList(String, String, int, boolean, boolean, boolean) - Static method in class com.pixelmed.network.PresentationContextListFactory: Create lists of presentation contexts for initiating associations, from the specified abstract syntax and transfer syntax as well as all supported transfer syntaxes.
createNewPresentationContextList(String, String, int) - Static method in class com.pixelmed.network.PresentationContextListFactory: Create lists of presentation contexts for initiating associations, from the specified abstract syntax and transfer syntax as well as all supported transfer syntaxes.
createNewPresentationContextList(Set<String>, int, boolean, boolean) - Static method in class com.pixelmed.network.PresentationContextListFactory: Create lists of presentation contexts for initiating associations, from a set of SOP Class UIDs.
createNewPresentationContextList(Set<String>, int) - Static method in class com.pixelmed.network.PresentationContextListFactory: Create lists of presentation contexts for initiating associations, from a set of SOP Class UIDs.
createNewPresentationContextList(SetOfDicomFiles, int, boolean, boolean, boolean) - Static method in class com.pixelmed.network.PresentationContextListFactory: Create lists of presentation contexts for initiating associations, from the abstract syntax and transfer syntax as well as all supported transfer syntaxes for all the files in the specified set of Dicom files.
createNewPresentationContextList(SetOfDicomFiles, int) - Static method in class com.pixelmed.network.PresentationContextListFactory: Create lists of presentation contexts for initiating associations, from the abstract syntax and transfer syntax as well as all supported transfer syntaxes for all the files in the specified set of Dicom files.
createNewPseudonymousPatientAndAddToMaps(String, String) - Method in class com.pixelmed.apps.PseudonymizeAndSequester: Create a new PatientID and PatientName and them to the maps.
createOIDFromUUIDCanonicalHexString(String) - Static method in class com.pixelmed.utils.UUIDBasedOID: Create an OID from the canonical hex string form of a UUID.
createPerformedProcedureCodeSequenceIfAbsent(AttributeList) - Method in class com.pixelmed.dicom.CompositeInstanceContext
createPixelInterleavedByteThreeComponentColorImage(int, int, byte[], int, ColorSpace, boolean) - Static method in class com.pixelmed.display.SourceImage
createPixelInterleavedShortThreeComponentColorImage(int, int, short[], int, ColorSpace) - Static method in class com.pixelmed.display.SourceImage
createPrimaryKeyForSelectedInformationEntity(InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: Create a new unique key which may be used to identify a new instance of an entity.
createPrimaryKeyForSelectedInformationEntity(InformationEntity) - Method in class com.pixelmed.database.DicomDatabaseInformationModel
createReferencedRequestSequenceIfAbsent(AttributeList) - Method in class com.pixelmed.dicom.CompositeInstanceContext
createSharedFunctionalGroupsIfNotPresent(AttributeList) - Static method in class com.pixelmed.dicom.FunctionalGroupUtilities: Create shared functional group sequences if not already present.
createSignedShortGrayscaleImage(int, int, short[], int) - Static method in class com.pixelmed.display.SourceImage
createTagByName() - Method in class com.pixelmed.dicom.DicomDictionary
createTagByName() - Method in class com.pixelmed.dicom.DicomDictionaryBase: Concrete sub-classes implement this method to create a map of tags from attribute names for each tag in the dictionary.
createTagList() - Method in class com.pixelmed.database.DicomDictionaryForMinimalPatientStudySeriesInstanceModel
createTagList() - Method in class com.pixelmed.database.DicomDictionaryForPatientStudySeriesConcatenationInstanceModel
createTagList() - Method in class com.pixelmed.database.DicomDictionaryForStudySeriesInstanceModel
createTagList() - Method in class com.pixelmed.dicom.DicomDictionary
createTagList() - Method in class com.pixelmed.dicom.DicomDictionaryBase: Concrete sub-classes implement this method to create a list of all tags in the dictionary.
createUnsignedShortGrayscaleImage(int, int, short[], int) - Static method in class com.pixelmed.display.SourceImage
createValueRepresentationsByTag() - Method in class com.pixelmed.dicom.DicomDictionary
createValueRepresentationsByTag() - Method in class com.pixelmed.dicom.DicomDictionaryBase: Concrete sub-classes implement this method to create a map of value representations for each tag in the dictionary.
createWorker() - Method in class com.pixelmed.web.HttpServer
createWorker() - Method in class com.pixelmed.web.RequestTypeServer
createWorker() - Method in class com.pixelmed.web.WadoServer
CreatorVersionUID - Static variable in class com.pixelmed.dicom.TagFromName
CRIT - Static variable in class com.pixelmed.utils.Syslog
CRON - Static variable in class com.pixelmed.utils.Syslog
crop - Variable in class com.pixelmed.display.DisplayedAreaSelection
CrossSectionalImageLibrary - Class in com.pixelmed.dicom
CrossSectionalImageLibrary() - Constructor for class com.pixelmed.dicom.CrossSectionalImageLibrary
CrossSectionalImageLibrary(AttributeList) - Constructor for class com.pixelmed.dicom.CrossSectionalImageLibrary
CrossSectionalImageLibrary(ContentItem, AttributeList) - Constructor for class com.pixelmed.dicom.CrossSectionalImageLibrary
CrossSectionalImageLibrary(Set<File>) - Constructor for class com.pixelmed.dicom.CrossSectionalImageLibrary
CrossSectionalImageLibrary.CrossSectionalImageLibraryEntry - Class in com.pixelmed.dicom
CrossSectionalImageLibraryEntry(ContentItemFactory.ImageContentItem, Map<String, HierarchicalSOPInstanceReference>) - Constructor for class com.pixelmed.dicom.CrossSectionalImageLibrary.CrossSectionalImageLibraryEntry
CrossSectionalImageLibraryEntry(AttributeList) - Constructor for class com.pixelmed.dicom.CrossSectionalImageLibrary.CrossSectionalImageLibraryEntry
CrossSectionalImageLibraryEntry(HierarchicalImageReference, String, GeometryOfSlice) - Constructor for class com.pixelmed.dicom.CrossSectionalImageLibrary.CrossSectionalImageLibraryEntry
CS - Static variable in class com.pixelmed.dicom.ValueRepresentation
CStoreRequestCommandMessage - Class in com.pixelmed.network
CStoreRequestCommandMessage(AttributeList) - Constructor for class com.pixelmed.network.CStoreRequestCommandMessage
CStoreRequestCommandMessage(String, String) - Constructor for class com.pixelmed.network.CStoreRequestCommandMessage
CStoreRequestCommandMessage(String, String, String, int) - Constructor for class com.pixelmed.network.CStoreRequestCommandMessage
CStoreResponseCommandMessage - Class in com.pixelmed.network
CStoreResponseCommandMessage(AttributeList) - Constructor for class com.pixelmed.network.CStoreResponseCommandMessage
CStoreResponseCommandMessage(String, String, int, int) - Constructor for class com.pixelmed.network.CStoreResponseCommandMessage
CTAcquisitionParameters - Class in com.pixelmed.dose
CTAcquisitionParameters(String, CTScanType, CodedSequenceItem, String, String, String, String, String, String, String, String, String, String, String, String, String, String, String, String, String, String) - Constructor for class com.pixelmed.dose.CTAcquisitionParameters
CTAcquisitionParameters(String, CTScanType, CodedSequenceItem, String, String, String, String, String, String, String, String, String, String, String) - Constructor for class com.pixelmed.dose.CTAcquisitionParameters
CTAcquisitionParameters(CTAcquisitionParameters) - Constructor for class com.pixelmed.dose.CTAcquisitionParameters
CTAcquisitionParameters(ContentItem) - Constructor for class com.pixelmed.dose.CTAcquisitionParameters
CTAcquisitionTypeSequence - Static variable in class com.pixelmed.dicom.TagFromName
CTAnatomy - Class in com.pixelmed.anatproc: This class encapsulates information pertaining to anatomy of CT images.
CTAnatomy() - Constructor for class com.pixelmed.anatproc.CTAnatomy
CTDIvol - Variable in class com.pixelmed.dose.CTDoseAcquisition
CTDose - Class in com.pixelmed.dose
CTDose(StructuredReport) - Constructor for class com.pixelmed.dose.CTDose
CTDose(StructuredReport, AttributeList) - Constructor for class com.pixelmed.dose.CTDose
CTDose(AttributeList) - Constructor for class com.pixelmed.dose.CTDose
CTDose(String, int, ScopeOfDoseAccummulation, String, String, String, String) - Constructor for class com.pixelmed.dose.CTDose
CTDose(String, String, int, ScopeOfDoseAccummulation, String, String, String, String) - Constructor for class com.pixelmed.dose.CTDose
CTDose(ScopeOfDoseAccummulation, String, String, String, String) - Constructor for class com.pixelmed.dose.CTDose
CTDoseAcquisition - Class in com.pixelmed.dose
CTDoseAcquisition(String, boolean, String, CTScanType, ScanRange, String, String, CTPhantomType) - Constructor for class com.pixelmed.dose.CTDoseAcquisition
CTDoseAcquisition(String, ContentItem) - Constructor for class com.pixelmed.dose.CTDoseAcquisition
CTDoseCheckDetails - Class in com.pixelmed.dose
CTDoseCheckDetails(boolean, String, boolean, String, String, String, String, PersonParticipant, boolean, String, boolean, String, String, String, String, PersonParticipant) - Constructor for class com.pixelmed.dose.CTDoseCheckDetails
CTDoseCheckDetails(ContentItem) - Constructor for class com.pixelmed.dose.CTDoseCheckDetails
CTExposureSequence - Static variable in class com.pixelmed.dicom.TagFromName
CTImageFrameTypeSequence - Static variable in class com.pixelmed.dicom.TagFromName
CTImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
CTIrradiationEventDataFromImages - Class in com.pixelmed.dose
CTIrradiationEventDataFromImages() - Constructor for class com.pixelmed.dose.CTIrradiationEventDataFromImages
CTIrradiationEventDataFromImages(String) - Constructor for class com.pixelmed.dose.CTIrradiationEventDataFromImages
CTIrradiationEventDataFromImages(Vector<String>) - Constructor for class com.pixelmed.dose.CTIrradiationEventDataFromImages
CTPhantomType - Class in com.pixelmed.dose
CTPositionSequence - Static variable in class com.pixelmed.dicom.TagFromName
CTReconstructionSequence - Static variable in class com.pixelmed.dicom.TagFromName
CTScanType - Class in com.pixelmed.dose
CTTableDynamicsSequence - Static variable in class com.pixelmed.dicom.TagFromName
CTV3 - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
CTXRayDetailsSequence - Static variable in class com.pixelmed.dicom.TagFromName
currentDatabaseTreeRecordSelections - Variable in class com.pixelmed.apps.DoseUtility
currentDatabaseTreeRecordSelections - Variable in class com.pixelmed.apps.DownloadOrTransmit
currentDate - Variable in class com.pixelmed.test.TestPatientAgeWhenRemoveIdentifyingAttributes
currentDestinationDatabaseSelections - Variable in class com.pixelmed.display.DicomCleaner
currentDestinationFilePathSelections - Variable in class com.pixelmed.display.DicomCleaner
currentFileName - Variable in class com.pixelmed.display.DicomImageBlackout
currentFileNumber - Variable in class com.pixelmed.display.DicomImageBlackout
CURRENTICCPROFILE - Static variable in class com.pixelmed.convert.TIFFTags
currentLocationIn3DSpace - Variable in class com.pixelmed.display.SingleImagePanel: This value is outside mouseMoved() only so that it doesn't need to be constantly reallocated - it is not used by any other method
CURRENTPREPROFILEMATRIX - Static variable in class com.pixelmed.convert.TIFFTags
currentRemoteQueryInformationModel - Variable in class com.pixelmed.apps.DoseUtility
currentRemoteQueryInformationModel - Variable in class com.pixelmed.apps.DownloadOrTransmit
currentRemoteQueryInformationModel - Variable in class com.pixelmed.display.DicomCleaner
currentRemoteQuerySelectionLevel - Variable in class com.pixelmed.apps.DownloadOrTransmit
currentRemoteQuerySelectionLevel - Variable in class com.pixelmed.display.DicomCleaner
currentRemoteQuerySelectionQueryTreeRecord - Variable in class com.pixelmed.apps.DownloadOrTransmit
currentRemoteQuerySelectionQueryTreeRecord - Variable in class com.pixelmed.display.DicomCleaner
currentRemoteQuerySelectionRetrieveAE - Variable in class com.pixelmed.apps.DownloadOrTransmit
currentRemoteQuerySelectionRetrieveAE - Variable in class com.pixelmed.display.DicomCleaner
currentRemoteQuerySelectionUniqueKey - Variable in class com.pixelmed.apps.DownloadOrTransmit
currentRemoteQuerySelectionUniqueKey - Variable in class com.pixelmed.display.DicomCleaner
currentRemoteQuerySelectionUniqueKeys - Variable in class com.pixelmed.apps.DownloadOrTransmit
currentRemoteQuerySelectionUniqueKeys - Variable in class com.pixelmed.display.DicomCleaner
currentRemoteQueryTreeBrowser - Variable in class com.pixelmed.apps.DoseUtility
currentRemoteQueryTreeBrowser - Variable in class com.pixelmed.apps.DownloadOrTransmit
CurrentRequestedProcedureEvidenceSequence - Static variable in class com.pixelmed.dicom.TagFromName
currentSourceDatabaseSelections - Variable in class com.pixelmed.display.DicomCleaner
currentSourceFilePathSelections - Variable in class com.pixelmed.display.DicomCleaner
cursor - Variable in class com.pixelmed.display.SafeCursorChanger.SafeCursorGetterThread
cursor - Variable in class com.pixelmed.display.SafeCursorChanger.SafeCursorSetterThread
cursorChanger - Variable in class com.pixelmed.apps.DoseUtility
cursorChanger - Variable in class com.pixelmed.apps.DownloadOrTransmit
cursorChanger - Variable in class com.pixelmed.display.DicomCleaner
cursorChanger - Variable in class com.pixelmed.display.DicomImageViewer

D

DA - Static variable in class com.pixelmed.dicom.ValueRepresentation
DAEMON - Static variable in class com.pixelmed.utils.Syslog
data - Variable in class com.pixelmed.database.MapTableModel
data - Variable in class com.pixelmed.dicom.AttributeListTableModel
DATABASE - Static variable in class com.pixelmed.display.event.BrowserPaneChangeEvent
DatabaseApplicationProperties - Class in com.pixelmed.database: This class provides common support to applications requiring properties related to database services.
DatabaseApplicationProperties(Properties) - Constructor for class com.pixelmed.database.DatabaseApplicationProperties: Extract the DICOM network properties from the supplied properties.
databaseConnection - Variable in class com.pixelmed.database.DatabaseInformationModel
databaseInformationModel - Variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
databaseInformationModel - Variable in class com.pixelmed.apps.MultiModalitySimulator
databaseInformationModel - Variable in class com.pixelmed.apps.StudyReceiver
DatabaseInformationModel - Class in com.pixelmed.database: The DatabaseInformationModel class is an abstract class that contains the core functionality for storing, accessing and maintaining a persistent representation of selected attributes of composite objects.
DatabaseInformationModel(String, InformationEntity, DicomDictionary) - Constructor for class com.pixelmed.database.DatabaseInformationModel: Instantiate a persistent information model using the named database.
DatabaseInformationModel(String, InformationEntity, DicomDictionary, String) - Constructor for class com.pixelmed.database.DatabaseInformationModel: Instantiate a persistent information model using the named database.
DatabaseInformationModel(String, String, InformationEntity, DicomDictionary) - Constructor for class com.pixelmed.database.DatabaseInformationModel: Instantiate a persistent information model using the named database allowing external SQL access.
DatabaseInformationModel(String, String, InformationEntity, DicomDictionary, String) - Constructor for class com.pixelmed.database.DatabaseInformationModel: Instantiate a persistent information model using the named database allowing external SQL access.
databaseInformationModel - Variable in class com.pixelmed.database.DatabaseMediaImporter
databaseInformationModel - Variable in class com.pixelmed.server.DicomAndWebStorageServer
databaseInformationModel - Variable in class com.pixelmed.test.TestCMove.OurReceivedObjectHandler
DatabaseMediaImporter - Class in com.pixelmed.database
DatabaseMediaImporter(String, File, DatabaseInformationModel, MessageLogger) - Constructor for class com.pixelmed.database.DatabaseMediaImporter
DatabaseMediaImporter(String, File, StoredFilePathStrategy, DatabaseInformationModel, MessageLogger) - Constructor for class com.pixelmed.database.DatabaseMediaImporter
databaseRootName - Variable in class com.pixelmed.database.DatabaseInformationModel
DatabaseTreeBrowser - Class in com.pixelmed.database: The DatabaseTreeBrowser class implements a Swing graphical user interface to browse the contents of DatabaseInformationModel.
DatabaseTreeBrowser(DatabaseInformationModel, JScrollPane, JScrollPane) - Constructor for class com.pixelmed.database.DatabaseTreeBrowser: Build and display a graphical user interface view of a database information model.
DatabaseTreeBrowser(DatabaseInformationModel, JFrame) - Constructor for class com.pixelmed.database.DatabaseTreeBrowser: Build and display a graphical user interface view of a database information model.
DatabaseTreeBrowser(DatabaseInformationModel, Container) - Constructor for class com.pixelmed.database.DatabaseTreeBrowser: Build and display a graphical user interface view of a database information model.
DatabaseTreeModel - Class in com.pixelmed.database: The DatabaseTreeModel class implements a TreeModel to abstract the contents of a database as a tree in order to provide support for a DatabaseTreeBrowser.
DatabaseTreeModel(DatabaseInformationModel) - Constructor for class com.pixelmed.database.DatabaseTreeModel: Construct a tree model of the supplied database.
DatabaseTreeRecord - Class in com.pixelmed.database: Instances of the DatabaseTreeRecord class represent nodes in a tree of the DatabaseTreeModel class, which in turn is used by the DatabaseTreeBrowser class.
DatabaseTreeRecord(DatabaseInformationModel, DatabaseTreeRecord, String, InformationEntity, String, String) - Constructor for class com.pixelmed.database.DatabaseTreeRecord: Make a new node in a tree.
DatabaseTreeRecord(DatabaseInformationModel, DatabaseTreeRecord, String, InformationEntity, String, String, String) - Constructor for class com.pixelmed.database.DatabaseTreeRecord: Make a new node in a tree.
databaseTreeScrollPane - Variable in class com.pixelmed.display.DicomImageViewer
DataPointColumns - Static variable in class com.pixelmed.dicom.TagFromName
DataPointRows - Static variable in class com.pixelmed.dicom.TagFromName
dataReceived - Variable in class com.pixelmed.network.CompositeResponseHandler
DataRepresentation - Static variable in class com.pixelmed.dicom.TagFromName
DataSetTrailingPadding - Static variable in class com.pixelmed.dicom.TagFromName
datatype - Variable in class com.pixelmed.convert.AnalyzeHeader
datatype - Variable in class com.pixelmed.convert.NIfTI1Header
DATATYPE - Static variable in class com.pixelmed.convert.TIFFTags
datatype_code - Variable in class com.pixelmed.convert.AnalyzeHeader
datatype_code - Variable in class com.pixelmed.convert.NIfTI1Header
Date - Static variable in class com.pixelmed.dicom.TagFromName
DateAttribute - Class in com.pixelmed.dicom: A concrete class specializing Attribute for Date (DT) attributes.
DateAttribute(AttributeTag) - Constructor for class com.pixelmed.dicom.DateAttribute: Construct an (empty) attribute.
DateAttribute(AttributeTag, long, DicomInputStream) - Constructor for class com.pixelmed.dicom.DateAttribute: Read an attribute from an input stream.
DateAttribute(AttributeTag, Long, DicomInputStream) - Constructor for class com.pixelmed.dicom.DateAttribute: Read an attribute from an input stream.
DateContentItem(ContentItem, AttributeList) - Constructor for class com.pixelmed.dicom.ContentItemFactory.DateContentItem
DateContentItem(ContentItem, String, CodedSequenceItem, String, String, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.DateContentItem
DateContentItem(ContentItem, String, CodedSequenceItem, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.DateContentItem
dateFormatter - Variable in class com.pixelmed.display.DialogMessageLogger
dateFormatter - Variable in class com.pixelmed.slf4j.Logger
DateOfLastCalibration - Static variable in class com.pixelmed.dicom.TagFromName
DateOfSecondaryCapture - Static variable in class com.pixelmed.dicom.TagFromName
DATETIME - Static variable in class com.pixelmed.convert.TIFFTags
DateTime - Static variable in class com.pixelmed.dicom.TagFromName
DateTimeAttribute - Class in com.pixelmed.dicom: A concrete class specializing Attribute for Date Time (DT) attributes.
DateTimeAttribute(AttributeTag) - Constructor for class com.pixelmed.dicom.DateTimeAttribute: Construct an (empty) attribute.
DateTimeAttribute(AttributeTag, long, DicomInputStream) - Constructor for class com.pixelmed.dicom.DateTimeAttribute: Read an attribute from an input stream.
DateTimeAttribute(AttributeTag, Long, DicomInputStream) - Constructor for class com.pixelmed.dicom.DateTimeAttribute: Read an attribute from an input stream.
DateTimeContentItem(ContentItem, AttributeList) - Constructor for class com.pixelmed.dicom.ContentItemFactory.DateTimeContentItem
DateTimeContentItem(ContentItem, String, CodedSequenceItem, String, String, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.DateTimeContentItem
DateTimeContentItem(ContentItem, String, CodedSequenceItem, String) - Constructor for class com.pixelmed.dicom.ContentItemFactory.DateTimeContentItem
DateTimeRangeMatch - Class in com.pixelmed.database
DateUtilities - Class in com.pixelmed.utils: Various static methods helpful for handling dates.
daysBackwardsFromTodayToQuery - Static variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
DC - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
DCM - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
DCMUID - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
DCSHUESHIFTVALUES - Static variable in class com.pixelmed.convert.TIFFTags
deActivateDiscovery() - Method in class com.pixelmed.network.NetworkApplicationProperties.OurNetworkConfigurationSource
deActivateDiscovery() - Method in class com.pixelmed.network.NetworkConfigurationFromLDAP
deActivateDiscovery() - Method in class com.pixelmed.network.NetworkConfigurationFromMulticastDNS: Stop DNS Self-Discovery.
deActivateDiscovery() - Method in class com.pixelmed.network.NetworkConfigurationSource: Stop discovery.
deActivateDumper() - Method in class com.pixelmed.network.NetworkConfigurationSource: Stop dumping current configuration information.
debug(String) - Method in class com.pixelmed.slf4j.Logger: Log a message at the DEBUG level.
debug(String, Object...) - Method in class com.pixelmed.slf4j.Logger: Log a message at the DEBUG level.
debug(String, Throwable) - Method in class com.pixelmed.slf4j.Logger: Log an exception (throwable) at the DEBUG level with an accompanying message.
DEBUG - Static variable in class com.pixelmed.utils.Syslog
debugEnabled - Variable in class com.pixelmed.slf4j.Logger
DecayCorrection - Static variable in class com.pixelmed.dicom.TagFromName
DecimalStringAttribute - Class in com.pixelmed.dicom: A concrete class specializing Attribute for Decimal String (DS) attributes.
DecimalStringAttribute(AttributeTag) - Constructor for class com.pixelmed.dicom.DecimalStringAttribute: Construct an (empty) attribute.
DecimalStringAttribute(AttributeTag, long, DicomInputStream) - Constructor for class com.pixelmed.dicom.DecimalStringAttribute: Read an attribute from an input stream.
DecimalStringAttribute(AttributeTag, Long, DicomInputStream) - Constructor for class com.pixelmed.dicom.DecimalStringAttribute: Read an attribute from an input stream.
DECODE - Static variable in class com.pixelmed.convert.TIFFTags
decode(InputStream, OutputStream, int) - Static method in class com.pixelmed.dicom.UnPackBits
decode(InputStream) - Static method in class com.pixelmed.dicom.UnPackBits
decode(byte[]) - Static method in class com.pixelmed.dicom.UnPackBits
decode(InputStream, byte[], int, int) - Static method in class com.pixelmed.dicom.UnPackBits
decode() - Method in class com.pixelmed.scpecg.HuffmanDecoder: Decode a single value.
decode(int) - Method in class com.pixelmed.scpecg.HuffmanDecoder: Decode a specified number of values.
decodePage(int) - Method in class com.pixelmed.utils.PdfDecoder
DecompressDicomFiles - Class in com.pixelmed.apps: This class copies a set of DICOM files, decompressing them if compressed.
DecompressDicomFiles(MessageLogger) - Constructor for class com.pixelmed.apps.DecompressDicomFiles
decompressPixelData - Variable in class com.pixelmed.dicom.AttributeList
deconstruct() - Method in class com.pixelmed.display.DicomImageBlackout
deconstruct() - Method in class com.pixelmed.display.SingleImagePanel
deconstruct() - Method in class com.pixelmed.display.SpectraPanel
deconstructAllSingleImagePanelsInContainer(Container) - Static method in class com.pixelmed.display.SingleImagePanel
deconstructAllSpectraPanelsInContainer(Container) - Static method in class com.pixelmed.display.SpectraPanel
deducePixelMagnificationRatioFromSpacing - Variable in class com.pixelmed.display.DisplayedAreaSelection
Default - Static variable in class com.pixelmed.dicom.TransferSyntax
default_CheckBoxAcceptAnyTransferSyntaxIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxAddContributingEquipmentIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxAggregateAgesOver89IsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxCleanUIDsIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxHierarchicalExportIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxModifyDatesIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemoveAllStructuredContentIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemoveCharacteristicsIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemoveClinicalTrialAttributesIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemoveDescriptionsIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemoveDeviceIdentityIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemoveIdentityIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemoveInstitutionIdentityIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemovePrivateIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemoveProtocolNameIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemoveSeriesDescriptionsIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxRemoveUnsafeStructuredContentIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxReplaceAccessionNumberIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxReplacePatientBirthDateIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxReplacePatientIDIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxReplacePatientNameIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
default_CheckBoxZipExportIsSelected - Static variable in class com.pixelmed.display.DicomCleaner
DEFAULT_CLOSEST_SLICE_TOLERANCE_DISTANCE - Static variable in class com.pixelmed.display.SuperimposedImage
default_DateTimeFormat - Static variable in class com.pixelmed.display.DicomCleaner
DEFAULT_ICON_SIZE - Static variable in class com.pixelmed.display.IconListBrowser
default_RandomReplacementAccessionNumberLength - Static variable in class com.pixelmed.display.DicomCleaner
default_RandomReplacementPatientIDLength - Static variable in class com.pixelmed.display.DicomCleaner
default_ShowDateTime - Static variable in class com.pixelmed.display.DicomCleaner
defaultAlternativeSubfolder - Static variable in class com.pixelmed.dicom.StoredFilePathStrategy
defaultAnatomy - Variable in class com.pixelmed.dose.CTDose
defaultCompletedStudiesFolderName - Variable in class com.pixelmed.apps.StudyReceiver
DEFAULTCROPORIGIN - Static variable in class com.pixelmed.convert.TIFFTags
DEFAULTCROPSIZE - Static variable in class com.pixelmed.convert.TIFFTags
defaultDatabaseRootName - Static variable in class com.pixelmed.database.DatabaseInformationModel
defaultDaysBackwardsFromTodayToQuery - Variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
defaultDicomCurrentlySelectedStorageTargetAE - Variable in class com.pixelmed.apps.ProcessReceivedWholeSlideImagesMakeTiledPyramidAndSend
DefaultDumpInfoInterval - Static variable in class com.pixelmed.network.NetworkConfigurationSource
defaultDuplicatesFolderNamePrefix - Static variable in class com.pixelmed.dicom.MoveDicomFilesIntoHierarchy
defaultEarliestDateInSet - Static variable in class com.pixelmed.apps.PseudonymizeAndSequester
defaultFileNameOfKnownGlyphs - Static variable in class com.pixelmed.doseocr.OCR
defaultHierarchicalFolderName - Static variable in class com.pixelmed.dicom.MoveDicomFilesIntoHierarchy
DefaultHuffmanTable - Class in com.pixelmed.scpecg: A class for constructing the default Huffman Table specified in the SCP-ECG standard.
DefaultHuffmanTable() - Constructor for class com.pixelmed.scpecg.DefaultHuffmanTable: Construct a default Huffman Table.
defaultIntervalAfterLastInstanceReceivedToWaitBeforeProcessingStudy - Variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
defaultIntervalAfterLastInstanceReceivedToWaitBeforeProcessingStudy - Variable in class com.pixelmed.apps.StudyReceiver
defaultNumberOfWorkers - Static variable in class com.pixelmed.web.HttpServer
defaultPropertiesFileName - Static variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
defaultPropertiesFileName - Static variable in class com.pixelmed.apps.InstanceReceiver
defaultPropertiesFileName - Static variable in class com.pixelmed.apps.StudyReceiver
defaultPyramidImagesFolderName - Variable in class com.pixelmed.apps.ProcessReceivedWholeSlideImagesMakeTiledPyramidAndSend
DefaultReplacementActionListener() - Constructor for class com.pixelmed.display.DicomCleaner.DefaultReplacementActionListener
defaultRetainDeidentifiedFiles - Variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
defaultRetainGeneratedRDSRFiles - Variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
defaultRetainSourceFilesUsedForSRGeneration - Variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
defaultSavedImagesFolderName - Variable in class com.pixelmed.apps.InstanceReceiver
DEFAULTSCALE - Static variable in class com.pixelmed.convert.TIFFTags
defaultSleepIntervalMultiplier - Variable in class com.pixelmed.apps.MultiModalitySimulator
defaultSleepTimeBetweenPassesToProcessReceivedFiles - Variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
defaultSleepTimeBetweenPassesToProcessReceivedFiles - Variable in class com.pixelmed.apps.StudyReceiver
defaultSleepTimeBetweenPassesToQueryRemoteAEs - Variable in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
DefaultSourceRefreshInterval - Static variable in class com.pixelmed.network.NetworkConfigurationSource
DefaultStatusNotificationHandler() - Constructor for class com.pixelmed.display.DicomImageBlackout.DefaultStatusNotificationHandler
defaultValueForMissingNonZeroLengthStrings - Static variable in class com.pixelmed.dicom.ClinicalTrialsAttributes
defaultValueForMissingPossiblyZeroLengthStrings - Static variable in class com.pixelmed.dicom.ClinicalTrialsAttributes
DefaultWADOPort - Static variable in class com.pixelmed.network.NetworkDefaultValues
DefaultYearActionListener() - Constructor for class com.pixelmed.display.DicomCleaner.DefaultYearActionListener
deferredDecompression - Variable in class com.pixelmed.display.DicomImageBlackout
DeflatedExplicitVRLittleEndian - Static variable in class com.pixelmed.dicom.TransferSyntax
DeformableSpatialRegistrationStorage - Static variable in class com.pixelmed.dicom.SOPClass
DeidentificationMethod - Static variable in class com.pixelmed.dicom.TagFromName
DeidentificationMethodCodeSequence - Static variable in class com.pixelmed.dicom.TagFromName
DeidentifyAndRedact - Class in com.pixelmed.apps: A class to implement bulk de-identification and redaction of DICOM files.
DeidentifyAndRedact(String, String, String, boolean, boolean, boolean, AttributeList) - Constructor for class com.pixelmed.apps.DeidentifyAndRedact: Read DICOM format image files, de-identify them and apply any specified redactions to the Pixel Data.
DeidentifyAndRedact(String, String, String, boolean, boolean, AttributeList) - Constructor for class com.pixelmed.apps.DeidentifyAndRedact: Read DICOM format image files, de-identify them and apply any specified redactions to the Pixel Data.
DeidentifyAndRedact(String, String, String, boolean, boolean, boolean) - Constructor for class com.pixelmed.apps.DeidentifyAndRedact: Read DICOM format image files, de-identify them and apply any specified redactions to the Pixel Data.
DeidentifyAndRedact(String, String, String, boolean, boolean) - Constructor for class com.pixelmed.apps.DeidentifyAndRedact: Read DICOM format image files, de-identify them and apply any specified redactions to the Pixel Data.
DeidentifyAndRedact.OurMediaImporter - Class in com.pixelmed.apps: A protected class that actually does all the work of finding and processing the files.
DeidentifyAndRedact.RedactionRegions - Class in com.pixelmed.apps: A protected class to store sets of rectangular redaction regions indexed by a String classname.
DeidentifyAndRedactWithOriginalFileName - Class in com.pixelmed.apps
DeidentifyAndRedactWithOriginalFileName(String, String, String, boolean, boolean, boolean, AttributeList) - Constructor for class com.pixelmed.apps.DeidentifyAndRedactWithOriginalFileName
DeidentifyAndRedactWithOriginalFileName(String, String, String, boolean, boolean, AttributeList) - Constructor for class com.pixelmed.apps.DeidentifyAndRedactWithOriginalFileName
DeidentifyAndRedactWithOriginalFileName(String, String, String, boolean, boolean, boolean) - Constructor for class com.pixelmed.apps.DeidentifyAndRedactWithOriginalFileName
DeidentifyAndRedactWithOriginalFileName(String, String, String, boolean, boolean) - Constructor for class com.pixelmed.apps.DeidentifyAndRedactWithOriginalFileName
deidentifyFile(String) - Method in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
deidentifyFiles(Vector<String>) - Method in class com.pixelmed.apps.DoseUtility
deidentifyWhenSendingToRegistryCheckBox - Variable in class com.pixelmed.apps.DoseUtility
deidentifyWhenSendingToRegistryLabelText - Static variable in class com.pixelmed.apps.DoseUtility
deleteFiles(SetOfDicomFiles) - Static method in class com.pixelmed.apps.MultiModalitySimulator
deleteFilesAndDatabaseRecords(Set<DoseReporterWithLegacyOCRAndAutoSendToRegistry.CandidateFile>) - Method in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
deleteFilesAndSetDatabaseRecordsToReferenced(Set<DoseReporterWithLegacyOCRAndAutoSendToRegistry.CandidateFile>) - Method in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
deleteFilesWhenNoLongerNeeded - Variable in class com.pixelmed.dicom.OtherAttributeOnDisk
deleteFilesWhenNoLongerNeeded() - Method in class com.pixelmed.dicom.OtherAttributeOnDisk
deleteFilesWhenNoLongerNeeded - Variable in class com.pixelmed.dicom.OtherByteAttributeMultipleFilesOnDisk
deleteFilesWhenNoLongerNeeded() - Method in class com.pixelmed.dicom.OtherByteAttributeMultipleFilesOnDisk
deleteFilesWhenNoLongerNeeded - Variable in class com.pixelmed.dicom.OtherFloatAttributeMultipleFilesOnDisk
deleteFilesWhenNoLongerNeeded() - Method in class com.pixelmed.dicom.OtherFloatAttributeMultipleFilesOnDisk
deleteFilesWhenNoLongerNeeded - Variable in class com.pixelmed.dicom.OtherWordAttributeMultipleFilesOnDisk
deleteFilesWhenNoLongerNeeded() - Method in class com.pixelmed.dicom.OtherWordAttributeMultipleFilesOnDisk
DeleteFromDatabase - Class in com.pixelmed.database: This class provides methods for removing entries from a database, all its children and any associated files that were copied into the database (rather than referenced).
DeleteFromDatabase() - Constructor for class com.pixelmed.database.DeleteFromDatabase
deleteRecord(InformationEntity, String) - Method in class com.pixelmed.database.DatabaseInformationModel: Delete a database record (a particular instance of an information entity).
deleteRecordChildrenAndFilesByLocalPrimaryKey(DatabaseInformationModel, InformationEntity, String) - Static method in class com.pixelmed.database.DeleteFromDatabase: Remove the database entry, all its children and any copied files.
deleteRecordChildrenAndFilesByUniqueKey(DatabaseInformationModel, String, String) - Static method in class com.pixelmed.database.DeleteFromDatabase
deleteRecordChildrenAndFilesByUniqueKey(DatabaseInformationModel, InformationEntity, String) - Static method in class com.pixelmed.database.DeleteFromDatabase: Remove the database entry, all its children and any copied files.
DemographicAndTechniqueAnnotations - Class in com.pixelmed.display: A class to extract selected DICOM annotative attributes into defined displayed area relative positions.
DemographicAndTechniqueAnnotations(AttributeList) - Constructor for class com.pixelmed.display.DemographicAndTechniqueAnnotations
DemographicAndTechniqueAnnotations(AttributeList, GeometryOfVolume) - Constructor for class com.pixelmed.display.DemographicAndTechniqueAnnotations
DemographicAndTechniqueAnnotations(AttributeList, GeometryOfVolume, boolean) - Constructor for class com.pixelmed.display.DemographicAndTechniqueAnnotations
DemographicAndTechniqueAnnotations.AnnotationLayoutConfigurationEntry - Class in com.pixelmed.display
DerivationCodeSequence - Static variable in class com.pixelmed.dicom.TagFromName
DerivationDescription - Static variable in class com.pixelmed.dicom.TagFromName
DerivationImageSequence - Static variable in class com.pixelmed.dicom.TagFromName
DERIVED_FROM_HUMAN_READABLE_REPORTS - Static variable in class com.pixelmed.dose.SourceOfDoseInformation
derivedAcquisitionDateTimeColumnName - Static variable in class com.pixelmed.database.DicomDatabaseInformationModel
derivedContentDateTimeColumnName - Static variable in class com.pixelmed.database.DicomDatabaseInformationModel
derivedLossyImageCompressionColumnName - Static variable in class com.pixelmed.database.DicomDatabaseInformationModel
derivedSeriesDateTimeColumnName - Static variable in class com.pixelmed.database.DicomDatabaseInformationModel
derivedStudyDateTimeColumnName - Static variable in class com.pixelmed.database.DicomDatabaseInformationModel
deriveScanDateTimeFromHalfLifeAcquisitionDateTimeFrameReferenceTimeAndActualFrameDuration(AttributeList) - Static method in class com.pixelmed.dicom.SUVTransform
deriveScanningLengthFromDLPAndCTDIVolIfGreater(String, String) - Method in class com.pixelmed.dose.CTAcquisitionParameters
DermoscopicPhotographyImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
describeColorModel(ColorModel, PrintStream) - Static method in class com.pixelmed.display.BufferedImageUtilities: Describe characteristics of ColorModel.
describeColorModel(ColorModel) - Static method in class com.pixelmed.display.BufferedImageUtilities: Describe characteristics of ColorModel.
DescribeGraphicsEnvironment - Class in com.pixelmed.display: This class describes the graphics environment (number and type and size of displays).
DescribeGraphicsEnvironment() - Constructor for class com.pixelmed.display.DescribeGraphicsEnvironment
describeImage(BufferedImage, PrintStream) - Static method in class com.pixelmed.display.BufferedImageUtilities: Describe characteristics of BufferedImage's Raster, SampleModel, ColorModel, etc.
describeImage(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities: Describe characteristics of BufferedImage's Raster, SampleModel, ColorModel, etc.
describeIPAddress(InetAddress) - Static method in class com.pixelmed.network.ProbeCapability
describeLossyCompression(AttributeList) - Static method in class com.pixelmed.dicom.LossyImageCompression: Describe the nature of lossy compressed that has ever been applied to an image.
describeMissingValues(int) - Static method in class com.pixelmed.scpecg.Section: Get a description of measurement values that may have missing values.
describeRaster(Raster, PrintStream) - Static method in class com.pixelmed.display.BufferedImageUtilities: Describe characteristics of Raster.
describeRaster(Raster) - Static method in class com.pixelmed.display.BufferedImageUtilities: Describe characteristics of Raster.
describeUndefinedOrMissingValues(int) - Static method in class com.pixelmed.scpecg.Section7: Get a description of measurement values that may have undefined or missing values.
description - Variable in class com.pixelmed.convert.AnalyzeHeader
description - Variable in class com.pixelmed.convert.NIfTI1Header
Description(int, String) - Constructor for class com.pixelmed.convert.TIFFTags.Description
description - Variable in class com.pixelmed.dicom.PixelSpacing
description - Variable in class com.pixelmed.dicom.TransferSyntax
description - Variable in class com.pixelmed.dose.CTDose
DescriptionFactory - Class in com.pixelmed.dicom: A class of static methods to provide descriptions of images, including image orientation relative to the patient from the mathematical position and orientation attributes, and including other descriptive attributes such as from dicom directory records and images using multi-frame functional groups.
DescriptionFactory() - Constructor for class com.pixelmed.dicom.DescriptionFactory
descriptionOfConcept - Variable in class com.pixelmed.anatproc.DictionaryOfConcepts
descriptions - Static variable in class com.pixelmed.convert.TIFFTags
DetailSRStorageTrialRetired - Static variable in class com.pixelmed.dicom.SOPClass
determineMediaTypeFromFile(String) - Static method in class com.pixelmed.convert.EncapsulateData
determineModalityFromSOPClass(String) - Static method in class com.pixelmed.convert.EncapsulateData
determineSOPClassFromMediaType(String) - Static method in class com.pixelmed.convert.EncapsulateData
determineUnknownRelationshipType(String, String, JsonValue) - Method in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
determineUnknownValueType(String, JsonValue) - Method in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
DeviceParticipant - Class in com.pixelmed.dose
DeviceParticipant(String, String, String, String) - Constructor for class com.pixelmed.dose.DeviceParticipant
DeviceParticipant(ContentItem) - Constructor for class com.pixelmed.dose.DeviceParticipant
DeviceSerialNumber - Static variable in class com.pixelmed.dicom.TagFromName
DeviceUID - Static variable in class com.pixelmed.dicom.TagFromName
DialogMessageLogger - Class in com.pixelmed.display: A class to write log and status messages to a scrolling text area in a dialog box.
DialogMessageLogger(String, int, int, boolean) - Constructor for class com.pixelmed.display.DialogMessageLogger: Construct a logger and make it immediately visible.
DialogMessageLogger(String, int, int, boolean, boolean) - Constructor for class com.pixelmed.display.DialogMessageLogger: Construct a slf4jlogger.
DialogMessageLogger(String, int, int, boolean, boolean, boolean, String) - Constructor for class com.pixelmed.display.DialogMessageLogger: Construct a slf4jlogger.
DialogMessageLogger.ClearActionListener - Class in com.pixelmed.display
DialogMessageLogger.CreateGUIRunnable - Class in com.pixelmed.display
DialogMessageLogger.SendRunnable - Class in com.pixelmed.display
DialogMessageLogger.SetVisibleRunnable - Class in com.pixelmed.display
dicomAETitle - Variable in class com.pixelmed.network.ApplicationEntity
dicomAETitleField - Variable in class com.pixelmed.network.ApplicationEntityConfigurationDialog
DicomAndWebStorageServer - Class in com.pixelmed.server: The DicomAndWebStorageServer implements a DICOM storage server with query and retrieval as well as an HTTP server that responds to web requests including WADO as well as an external SQL database access server.
DicomAndWebStorageServer(Properties) - Constructor for class com.pixelmed.server.DicomAndWebStorageServer: Wait for connections and process requests, storing received files in a database, using the default PatientStudySeriesConcatenationInstanceModel.
DicomAndWebStorageServer(Properties, DatabaseInformationModel) - Constructor for class com.pixelmed.server.DicomAndWebStorageServer: Wait for connections and process requests, storing received files in a database, using the specified database information model.
DicomBrowser - Class in com.pixelmed.display: A primitive DICOMDIR browsing application that will display images and structured reports, including marking up image coordinates and measurements on referenced images.
DicomBrowser() - Constructor for class com.pixelmed.display.DicomBrowser: Construct a browser.
DicomBrowser(String) - Constructor for class com.pixelmed.display.DicomBrowser: Construct a browser.
DicomBrowser(int) - Constructor for class com.pixelmed.display.DicomBrowser: Construct a browser.
DicomBrowser(String, int) - Constructor for class com.pixelmed.display.DicomBrowser: Construct a browser.
dicomCalculation - Static variable in class com.pixelmed.display.event.WindowLinearCalculationChangeEvent
DicomCleaner - Class in com.pixelmed.display: This class is an application for importing or retrieving DICOM studies, cleaning them (i.e., de-identifying them or replacing UIDs, etc.), and sending them elsewhere.
DicomCleaner() - Constructor for class com.pixelmed.display.DicomCleaner
DicomCleaner(String) - Constructor for class com.pixelmed.display.DicomCleaner
DicomCleaner.BlackoutActionListener - Class in com.pixelmed.display
DicomCleaner.CancelActionListener - Class in com.pixelmed.display
DicomCleaner.CleanActionListener - Class in com.pixelmed.display
DicomCleaner.CleanWorker - Class in com.pixelmed.display
DicomCleaner.ConfigureActionListener - Class in com.pixelmed.display
DicomCleaner.DefaultReplacementActionListener - Class in com.pixelmed.display
DicomCleaner.DefaultYearActionListener - Class in com.pixelmed.display
DicomCleaner.EarliestYearActionListener - Class in com.pixelmed.display
DicomCleaner.ExportActionListener - Class in com.pixelmed.display
DicomCleaner.ExportWorker - Class in com.pixelmed.display
DicomCleaner.ImportActionListener - Class in com.pixelmed.display
DicomCleaner.ImportWorker - Class in com.pixelmed.display
DicomCleaner.LogActionListener - Class in com.pixelmed.display
DicomCleaner.OurDestinationDatabaseTreeBrowser - Class in com.pixelmed.display
DicomCleaner.OurDicomImageBlackout - Class in com.pixelmed.display
DicomCleaner.OurDicomImageBlackout.ApplicationStatusChangeEventNotificationHandler - Class in com.pixelmed.display
DicomCleaner.OurMediaImporter - Class in com.pixelmed.display
DicomCleaner.OurMultipleInstanceTransferStatusHandler - Class in com.pixelmed.display
DicomCleaner.OurQueryTreeBrowser - Class in com.pixelmed.display
DicomCleaner.OurReceivedObjectHandler - Class in com.pixelmed.display
DicomCleaner.OurSourceDatabaseTreeBrowser - Class in com.pixelmed.display
DicomCleaner.PurgeActionListener - Class in com.pixelmed.display
DicomCleaner.PurgeWorker - Class in com.pixelmed.display
DicomCleaner.QueryActionListener - Class in com.pixelmed.display
DicomCleaner.QueryWorker - Class in com.pixelmed.display
DicomCleaner.RandomReplacementActionListener - Class in com.pixelmed.display
DicomCleaner.RandomYearActionListener - Class in com.pixelmed.display
DicomCleaner.RetrieveActionListener - Class in com.pixelmed.display
DicomCleaner.RetrieveWorker - Class in com.pixelmed.display
DicomCleaner.SendActionListener - Class in com.pixelmed.display
DicomCleaner.SendWorker - Class in com.pixelmed.display
DicomDatabaseInformationModel - Class in com.pixelmed.database: The DicomDatabaseInformationModel class is an abstract class that specializes DatabaseInformationModel by adding methods specific to a typical DICOM composite object information model.
DicomDatabaseInformationModel(String, InformationEntity, DicomDictionary) - Constructor for class com.pixelmed.database.DicomDatabaseInformationModel
DicomDatabaseInformationModel(String, InformationEntity, DicomDictionary, String) - Constructor for class com.pixelmed.database.DicomDatabaseInformationModel
DicomDatabaseInformationModel(String, String, InformationEntity, DicomDictionary) - Constructor for class com.pixelmed.database.DicomDatabaseInformationModel
DicomDatabaseInformationModel(String, String, InformationEntity, DicomDictionary, String) - Constructor for class com.pixelmed.database.DicomDatabaseInformationModel
DicomDictionary - Class in com.pixelmed.dicom: The DicomDictionary class is a complete standard dictionary of DICOM attributes and associated information.
DicomDictionary() - Constructor for class com.pixelmed.dicom.DicomDictionary
DicomDictionaryBase - Class in com.pixelmed.dicom: The DicomDictionaryBase class is an abstract class for creating and accessing a dictionary of DICOM attributes and associated information.
DicomDictionaryBase() - Constructor for class com.pixelmed.dicom.DicomDictionaryBase: Instantiate a dictionary by calling all create methods of the concrete sub-class.
DicomDictionaryForMinimalPatientStudySeriesInstanceModel - Class in com.pixelmed.database: The DicomDictionaryForMinimalPatientStudySeriesInstanceModel class supports a simple DICOM Patient/Study/Series/Concatenation/Instance model.
DicomDictionaryForMinimalPatientStudySeriesInstanceModel() - Constructor for class com.pixelmed.database.DicomDictionaryForMinimalPatientStudySeriesInstanceModel
DicomDictionaryForPatientStudySeriesConcatenationInstanceModel - Class in com.pixelmed.database: The DicomDictionaryForPatientStudySeriesConcatenationInstanceModel class supports a simple DICOM Patient/Study/Series/Concatenation/Instance model.
DicomDictionaryForPatientStudySeriesConcatenationInstanceModel() - Constructor for class com.pixelmed.database.DicomDictionaryForPatientStudySeriesConcatenationInstanceModel
DicomDictionaryForStudySeriesInstanceModel - Class in com.pixelmed.database: The DicomDictionaryForStudySeriesInstanceModel class supports a minimal DICOM Study/Series/Instance model.
DicomDictionaryForStudySeriesInstanceModel() - Constructor for class com.pixelmed.database.DicomDictionaryForStudySeriesInstanceModel
DICOMDIR - Static variable in class com.pixelmed.display.event.BrowserPaneChangeEvent
DicomDirectory - Class in com.pixelmed.dicom
DicomDirectory(String[]) - Constructor for class com.pixelmed.dicom.DicomDirectory: Create a new DicomDirectory from a list of existing DICOM files contained within the current working directory.
DicomDirectory(File, String[]) - Constructor for class com.pixelmed.dicom.DicomDirectory: Create a new DicomDirectory from a list of existing DICOM files contained within a specified root directory.
DicomDirectory() - Constructor for class com.pixelmed.dicom.DicomDirectory: Create an empty DicomDirectory
DicomDirectory(AttributeList) - Constructor for class com.pixelmed.dicom.DicomDirectory: Create a DicomDirectory from a DICOMDIR instance already read as an AttributeList
DicomDirectory(AttributeList, boolean) - Constructor for class com.pixelmed.dicom.DicomDirectory: Create a DicomDirectory from a DICOMDIR instance already read as an AttributeList, optionally creating synthetic concatenation records
DicomDirectoryBrowser - Class in com.pixelmed.dicom
DicomDirectoryBrowser(AttributeList, String) - Constructor for class com.pixelmed.dicom.DicomDirectoryBrowser
DicomDirectoryBrowser(AttributeList, String, JScrollPane, JScrollPane) - Constructor for class com.pixelmed.dicom.DicomDirectoryBrowser
DicomDirectoryBrowser(AttributeList, String, JFrame) - Constructor for class com.pixelmed.dicom.DicomDirectoryBrowser
DicomDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecord(DicomDirectoryRecord, AttributeList) - Constructor for class com.pixelmed.dicom.DicomDirectoryRecord
DicomDirectoryRecordFactory - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory() - Constructor for class com.pixelmed.dicom.DicomDirectoryRecordFactory
DicomDirectoryRecordFactory.ConcatenationDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.EncapsulatedDocumentDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.FiducialDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.HL7StructuredDocumentDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.ImageDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.KODocumentDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.PatientDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.PresentationStateDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.RawDataDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.RealWorldValueMappingDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.RegistrationDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.RTDoseDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.RTPlanDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.RTStructureSetDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.RTTreatmentRecordDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.SeriesDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.SpectroscopyDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.SRDocumentDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.StereometricRelationshipDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.StudyDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.TopDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.UnrecognizedDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordFactory.WaveformDirectoryRecord - Class in com.pixelmed.dicom
DicomDirectoryRecordType - Class in com.pixelmed.dicom
DicomDirectoryRecordType() - Constructor for class com.pixelmed.dicom.DicomDirectoryRecordType
dicomdirTreeScrollPane - Variable in class com.pixelmed.display.DicomImageViewer
DicomException - Exception in com.pixelmed.dicom
DicomException(String) - Constructor for exception com.pixelmed.dicom.DicomException: Constructs a new exception with the specified detail message.
DicomFile(String, String, String, String) - Constructor for class com.pixelmed.dicom.SetOfDicomFiles.DicomFile
DicomFile(String, AttributeList) - Constructor for class com.pixelmed.dicom.SetOfDicomFiles.DicomFile
DicomFile(String, AttributeList, boolean) - Constructor for class com.pixelmed.dicom.SetOfDicomFiles.DicomFile
DicomFile(String) - Constructor for class com.pixelmed.dicom.SetOfDicomFiles.DicomFile: Store a description a DICOM file by reading its metaheader, +/- entire attribute list, as necessary.
DicomFile(String, boolean) - Constructor for class com.pixelmed.dicom.SetOfDicomFiles.DicomFile: Store a description a DICOM file by reading its metaheader, +/- entire attribute list, as necessary.
DicomFile(String, boolean, boolean) - Constructor for class com.pixelmed.dicom.SetOfDicomFiles.DicomFile: Store a description a DICOM file by reading its metaheader, +/- entire attribute list, as necessary.
dicomFileNames - Variable in class com.pixelmed.display.DicomImageBlackout
DicomFileUtilities - Class in com.pixelmed.dicom: Various static methods helpful for handling DICOM files.
DicomImageBlackout - Class in com.pixelmed.display: This class displays images and allows the user to black out burned-in annotation, and save the result.
DicomImageBlackout(String[], DicomImageBlackout.StatusNotificationHandler, int) - Constructor for class com.pixelmed.display.DicomImageBlackout: Opens a window to display the supplied list of DICOM files to allow them to have burned in annotation blacked out.
DicomImageBlackout(String, String[], DicomImageBlackout.StatusNotificationHandler, int) - Constructor for class com.pixelmed.display.DicomImageBlackout: Opens a window to display the supplied list of DICOM files to allow them to have burned in annotation blacked out.
DicomImageBlackout.ApplyActionListener - Class in com.pixelmed.display
DicomImageBlackout.ApplySaveAllActionListener - Class in com.pixelmed.display
DicomImageBlackout.BurnedInAnnotationFlagAction - Class in com.pixelmed.display: A class of values for the Burned in Annotation action argument of the DicomImageBlackout() constructor.
DicomImageBlackout.CancelActionListener - Class in com.pixelmed.display
DicomImageBlackout.CenterMaximumAfterInitialSizeLayout - Class in com.pixelmed.display
DicomImageBlackout.CineSliderChangeListener - Class in com.pixelmed.display
DicomImageBlackout.DefaultStatusNotificationHandler - Class in com.pixelmed.display: A default status notification implementation, which just writes everything to stderr.
DicomImageBlackout.NextActionListener - Class in com.pixelmed.display
DicomImageBlackout.OverlaysChangeListener - Class in com.pixelmed.display
DicomImageBlackout.PixelPaddingBlackoutValueChangeListener - Class in com.pixelmed.display
DicomImageBlackout.PreviousActionListener - Class in com.pixelmed.display
DicomImageBlackout.SaveActionListener - Class in com.pixelmed.display
DicomImageBlackout.StatusNotificationHandler - Class in com.pixelmed.display: An abstract class for the user of to supply a callback notification method, supplied as an argument of the DicomImageBlackout() constructor.
DicomImageBlackout.ZeroBlackoutValueChangeListener - Class in com.pixelmed.display
DicomImageViewer - Class in com.pixelmed.display: This class is an entire application for displaying and viewing images and spectroscopy objects.
DicomImageViewer.DatabasePurgeWorker - Class in com.pixelmed.display
DicomImageViewer.ImportFromSelectionToDatabaseActionListener - Class in com.pixelmed.display
DicomImageViewer.OurDatabaseMediaImporter - Class in com.pixelmed.display
DicomInputStream - Class in com.pixelmed.dicom: A class that extends BinaryInputStream by adding the concept of transfer syntaxes, for a (possible) meta information header and a data set.
DicomInputStream(InputStream) - Constructor for class com.pixelmed.dicom.DicomInputStream: Construct a stream to read DICOM data sets from the supplied stream.
DicomInputStream(File) - Constructor for class com.pixelmed.dicom.DicomInputStream: Construct a stream to read DICOM data sets from the supplied stream.
DicomInputStream(InputStream, String, boolean) - Constructor for class com.pixelmed.dicom.DicomInputStream: Construct a stream to read DICOM data sets from the supplied stream.
DicomInputStream(File, String, boolean) - Constructor for class com.pixelmed.dicom.DicomInputStream: Construct a stream to read DICOM data sets from the supplied stream.
DicomInstanceValidator - Class in com.pixelmed.validate: The DicomInstanceValidator class is for validating composite storage SOP instances against the standard IOD for the corresponding storage SOP Class.
DicomInstanceValidator() - Constructor for class com.pixelmed.validate.DicomInstanceValidator: Create an instance of validator.
DicomNetworkException - Exception in com.pixelmed.network
DicomNetworkException(String) - Constructor for exception com.pixelmed.network.DicomNetworkException
DicomOutputStream - Class in com.pixelmed.dicom: A class that extends BinaryOutputStream by adding the concept of transfer syntaxes, for a (possible) meta information header and a data set.
DicomOutputStream(OutputStream, String, String) - Constructor for class com.pixelmed.dicom.DicomOutputStream: Construct a stream to write DICOM data sets to the supplied stream.
DicomOutputStream(OutputStream, String, String, byte[]) - Constructor for class com.pixelmed.dicom.DicomOutputStream: Construct a stream to write DICOM data sets to the supplied stream.
DicomSourceECG - Class in com.pixelmed.displaywave: A class that encapsulates the features and values from a DICOM ECG source, usually for the purpose of displaying it.
DicomSourceECG(BinaryInputStream) - Constructor for class com.pixelmed.displaywave.DicomSourceECG: Construct ECG from a DICOM waveform object from an input stream (such as from a file or the network).
DicomSourceECG(DicomInputStream) - Constructor for class com.pixelmed.displaywave.DicomSourceECG: Construct ECG from a DICOM waveform object from an input stream (such as from a file or the network).
DicomSourceECG(AttributeList) - Constructor for class com.pixelmed.displaywave.DicomSourceECG: Construct ECG from a DICOM waveform object from a list of DICOM attributes.
DicomSRValidator - Class in com.pixelmed.validate: The DicomSRValidator class is for validating SR instances against the standard IOD for the corresponding SOP Class.
DicomSRValidator() - Constructor for class com.pixelmed.validate.DicomSRValidator: Create an instance of validator.
DicomStreamCopier - Class in com.pixelmed.dicom: A class to copy DICOM attributes from anm input stream to an output stream, converting the encoding of the attributes between transfer syntaxes if necessary.
DicomStreamCopier(DicomInputStream, DicomOutputStream) - Constructor for class com.pixelmed.dicom.DicomStreamCopier: Copy a dicom input stream to a dicom output stream, using any meta information header if present in input, but not copying it.
DICONDEEddyCurrentImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
DICONDEEddyCurrentMultiframeImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
DICOS2DAITStorage - Static variable in class com.pixelmed.dicom.SOPClass
DICOS3DAITStorage - Static variable in class com.pixelmed.dicom.SOPClass
DICOSCTImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
DICOSDigitalXRayImageStorageForPresentation - Static variable in class com.pixelmed.dicom.SOPClass
DICOSDigitalXRayImageStorageForProcessing - Static variable in class com.pixelmed.dicom.SOPClass
DICOSQuadrupoleResonanceStorage - Static variable in class com.pixelmed.dicom.SOPClass
DICOSThreatDetectionReportStorage - Static variable in class com.pixelmed.dicom.SOPClass
dictionary - Variable in class com.pixelmed.apps.SetCharacteristicsFromSummary
dictionary - Variable in class com.pixelmed.database.DatabaseInformationModel
dictionary - Static variable in class com.pixelmed.dicom.ClinicalTrialsAttributes
DictionaryOfConcepts - Class in com.pixelmed.anatproc: This class contains utility methods provide for the detection of concepts in various header attributes regardless of whether these are formal codes, code strings or free text comments.
DictionaryOfConcepts(DisplayableConcept[]) - Constructor for class com.pixelmed.anatproc.DictionaryOfConcepts
DictionaryOfConcepts(DisplayableConcept[], String[], String) - Constructor for class com.pixelmed.anatproc.DictionaryOfConcepts
digest(String, String) - Static method in class com.pixelmed.utils.FileUtilities: Return a message digest of a file.
digest(InputStream, String) - Static method in class com.pixelmed.utils.FileUtilities: Return a message digest of an InputStream.
DigitalImageFormatAcquired - Static variable in class com.pixelmed.dicom.TagFromName
DigitalIntraoralXRayImageStorageForPresentation - Static variable in class com.pixelmed.dicom.SOPClass
DigitalIntraoralXRayImageStorageForProcessing - Static variable in class com.pixelmed.dicom.SOPClass
DigitalMammographyXRayImageStorageForPresentation - Static variable in class com.pixelmed.dicom.SOPClass
DigitalMammographyXRayImageStorageForProcessing - Static variable in class com.pixelmed.dicom.SOPClass
DigitalXRayImageStorageForPresentation - Static variable in class com.pixelmed.dicom.SOPClass
DigitalXRayImageStorageForProcessing - Static variable in class com.pixelmed.dicom.SOPClass
DigitizingDeviceTransportDirection - Static variable in class com.pixelmed.dicom.TagFromName
dim - Variable in class com.pixelmed.convert.AnalyzeHeader
dim - Variable in class com.pixelmed.convert.NIfTI1Header
dim_info - Variable in class com.pixelmed.convert.NIfTI1Header
dim_un0 - Variable in class com.pixelmed.convert.AnalyzeHeader
DimensionDescriptionLabel - Static variable in class com.pixelmed.dicom.TagFromName
DimensionIndexPointer - Static variable in class com.pixelmed.dicom.TagFromName
DimensionIndexSequence - Static variable in class com.pixelmed.dicom.TagFromName
DimensionIndexValues - Static variable in class com.pixelmed.dicom.TagFromName
DimensionOrganizationSequence - Static variable in class com.pixelmed.dicom.TagFromName
DimensionOrganizationType - Static variable in class com.pixelmed.dicom.TagFromName
DimensionOrganizationUID - Static variable in class com.pixelmed.dicom.TagFromName
dimensions - Variable in class com.pixelmed.geometry.GeometryOfSlice
DIRECTIONVECTOR - Static variable in class com.pixelmed.display.DemographicAndTechniqueAnnotations
directory - Variable in class com.pixelmed.ftp.FTPRemoteHost
directoryField - Variable in class com.pixelmed.ftp.FTPRemoteHostConfigurationDialog
DirectoryRecordSequence - Static variable in class com.pixelmed.dicom.TagFromName
DirectoryRecordType - Static variable in class com.pixelmed.dicom.TagFromName
dirty() - Method in class com.pixelmed.display.SingleImagePanel
dirty(SourceImage) - Method in class com.pixelmed.display.SingleImagePanel
dirtyPanned() - Method in class com.pixelmed.display.SingleImagePanel
dirtySource() - Method in class com.pixelmed.display.SingleImagePanel
dirtySource(SourceImage) - Method in class com.pixelmed.display.SingleImagePanel
dirtyWindowing() - Method in class com.pixelmed.display.SingleImagePanel
DisplayableAnatomicConcept - Class in com.pixelmed.anatproc: This class represents anatomic concepts that may be encoded and displayed.
DisplayableAnatomicConcept(String, String, boolean, String, String, String, String, String, String, String[], String[], String[]) - Constructor for class com.pixelmed.anatproc.DisplayableAnatomicConcept: Create an anatomic concept that may be encoded and displayed.
DisplayableAnatomicConcept() - Constructor for class com.pixelmed.anatproc.DisplayableAnatomicConcept
DisplayableConcept - Class in com.pixelmed.anatproc: This class represents a coded concept that may be displayed, for example as a menu item in a pick list.
DisplayableConcept(String, String, String, String, String, String, String, String, String[], String[], String[]) - Constructor for class com.pixelmed.anatproc.DisplayableConcept: Create a coded concept that may be displayed.
DisplayableConcept() - Constructor for class com.pixelmed.anatproc.DisplayableConcept
DisplayableLateralityConcept - Class in com.pixelmed.anatproc: This class represents laterality concepts that may be encoded and displayed.
DisplayableLateralityConcept(String, String, String, String, String, String, String, String, String[], String[], String[]) - Constructor for class com.pixelmed.anatproc.DisplayableLateralityConcept: Create a laterality concept that may be encoded and displayed.
DisplayableLateralityConcept() - Constructor for class com.pixelmed.anatproc.DisplayableLateralityConcept
DisplayableViewConcept - Class in com.pixelmed.anatproc: This class represents view position concepts that may be encoded and displayed.
DisplayableViewConcept(String, String, String, String, String, String, String, String, String[], String[], String[]) - Constructor for class com.pixelmed.anatproc.DisplayableViewConcept: Create a view position concept that may be encoded and displayed.
DisplayableViewConcept() - Constructor for class com.pixelmed.anatproc.DisplayableViewConcept
DisplayDeviceArea - Class in com.pixelmed.display
DisplayDeviceArea(GraphicsDevice, int, int, int, int) - Constructor for class com.pixelmed.display.DisplayDeviceArea
DisplayDeviceArea(GraphicsDevice) - Constructor for class com.pixelmed.display.DisplayDeviceArea
DisplayedAreaSelection - Class in com.pixelmed.display: A class to keep track of a selected sub-region of an image for the purposes of display.
displayListOfPossibleBackgroundImagesForSpectra - Variable in class com.pixelmed.display.DicomImageViewer
displayListOfPossibleReferenceImagesForImages - Variable in class com.pixelmed.display.DicomImageViewer
displayListOfPossibleReferenceImagesForSpectra - Variable in class com.pixelmed.display.DicomImageViewer
displayListOfPossibleReferenceImagesForTiledImages - Variable in class com.pixelmed.display.DicomImageViewer
displayReset() - Method in class com.pixelmed.display.SingleImagePanel
displaySelectedMagnificationRatio(double) - Method in class com.pixelmed.display.SingleImagePanel
displaySequence - Variable in class com.pixelmed.displaywave.SourceECG
DisplayShutter - Class in com.pixelmed.dicom: A set of display shutter parameters constructed from the attributes of the DICOM Display Shutter Module.
DisplayShutter(AttributeList) - Constructor for class com.pixelmed.dicom.DisplayShutter: Extract the display shutter paramaters from a list of attributes
DisplayStructuredReportBrowser - Class in com.pixelmed.display
DisplayStructuredReportBrowser(AttributeList, Map, int, int) - Constructor for class com.pixelmed.display.DisplayStructuredReportBrowser
DisplayStructuredReportBrowser(AttributeList, Map, int, int, String) - Constructor for class com.pixelmed.display.DisplayStructuredReportBrowser
dispose() - Method in class com.pixelmed.dicom.CompressedFrameDecoder
dispose() - Method in class com.pixelmed.display.DicomImageBlackout
DistanceSourceToDetector - Static variable in class com.pixelmed.dicom.TagFromName
DistanceSourceToPatient - Static variable in class com.pixelmed.dicom.TagFromName
DLP - Variable in class com.pixelmed.dose.CTDoseAcquisition
dlpSubTotals - Variable in class com.pixelmed.dose.CTDose
dlpTotal - Variable in class com.pixelmed.dose.CTDose
dlpTotalPhantom - Variable in class com.pixelmed.dose.CTDose
DNGBACKWARDVERSION - Static variable in class com.pixelmed.convert.TIFFTags
DNGPRIVATEDATA - Static variable in class com.pixelmed.convert.TIFFTags
DNGVERSION - Static variable in class com.pixelmed.convert.TIFFTags
dob - Variable in class com.pixelmed.test.TestPatientAgeWhenRemoveIdentifyingAttributes
doCommonConstructorStuff(DisplayableConcept[], String[], String) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
doCommonConstructorStuff(String, String, InformationEntity, DicomDictionary, String) - Method in class com.pixelmed.database.DatabaseInformationModel: Instantiate a persistent information model using the named database.
doCommonConstructorStuff(String, int, int, int, int, ColorSpace) - Method in class com.pixelmed.dicom.CompressedFrameDecoder
doCommonConstructorStuff(String, int, int, int, int, ColorSpace, boolean, boolean) - Method in class com.pixelmed.dicom.CompressedFrameDecoder
doCommonConstructorStuff(String, String) - Method in class com.pixelmed.dicom.ContentItemFactory.CompositeContentItem
doCommonConstructorStuff(boolean, String, CodedSequenceItem, CodedSequenceItem, Double, Integer, Long) - Method in class com.pixelmed.dicom.ContentItemFactory.NumericContentItem
doCommonConstructorStuff() - Method in class com.pixelmed.display.MammoImageViewer
doCommonConstructorStuff(AttributeList, String, String) - Method in class com.pixelmed.doseocr.OCR: Perform OCR on the supplied image AttributeList.
doCommonConstructorStuff(AttributeList, BufferedImage, String, String) - Method in class com.pixelmed.doseocr.OCR: Perform OCR on the supplied image with AttributeList.
doCommonConstructorStuff(Component) - Method in class com.pixelmed.ftp.FTPRemoteHostConfigurationDialog
doCommonConstructorStuff() - Method in class com.pixelmed.geometry.LocalizerPoster
doCommonConstructorStuff(Component) - Method in class com.pixelmed.network.ApplicationEntityConfigurationDialog
doCommonConstructorStuff(Properties, DatabaseInformationModel) - Method in class com.pixelmed.server.DicomAndWebStorageServer: Wait for connections and process requests, storing received files in a database, using the specified database information model.
DocumentClassCodeSequence - Static variable in class com.pixelmed.dicom.TagFromName
DOCUMENTNAME - Static variable in class com.pixelmed.convert.TIFFTags
DocumentTitle - Static variable in class com.pixelmed.dicom.TagFromName
done - Variable in class com.pixelmed.network.ProbeCapability.StringPermutationGenerator
done - Variable in class com.pixelmed.network.ReceivedDataHandler
DoneActionListener() - Constructor for class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog.DoneActionListener
DoneActionListener() - Constructor for class com.pixelmed.network.NetworkApplicationConfigurationDialog.DoneActionListener
doNotEncodeStackInformationOption - Static variable in class com.pixelmed.dicom.MultiFrameImageFactory
doNotFlipOrRotate - Variable in class com.pixelmed.display.MammoImageViewer
doNotJustify - Variable in class com.pixelmed.display.MammoImageViewer
doseCheckDetails - Variable in class com.pixelmed.dose.CTDoseAcquisition
DoseComment - Static variable in class com.pixelmed.dicom.TagFromName
DoseCompositeInstanceContext - Class in com.pixelmed.dose
DoseCompositeInstanceContext() - Constructor for class com.pixelmed.dose.DoseCompositeInstanceContext
DoseCompositeInstanceContext(AttributeList) - Constructor for class com.pixelmed.dose.DoseCompositeInstanceContext
DoseReporterWithLegacyOCRAndAutoSendToRegistry - Class in com.pixelmed.apps: A class to wait for incoming dose screen images and SRs and send them to pre-configured registry.
DoseReporterWithLegacyOCRAndAutoSendToRegistry(String) - Constructor for class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry: Wait for incoming dose screen images and SRs and send to registry.
DoseReporterWithLegacyOCRAndAutoSendToRegistry.CandidateFile - Class in com.pixelmed.apps
DoseReporterWithLegacyOCRAndAutoSendToRegistry.OurPatientStudySeriesInstanceModel - Class in com.pixelmed.apps
DoseReporterWithLegacyOCRAndAutoSendToRegistry.OurReceivedObjectHandler - Class in com.pixelmed.apps
DoseReporterWithLegacyOCRAndAutoSendToRegistry.ReceivedFileProcessor - Class in com.pixelmed.apps
DoseReporterWithLegacyOCRAndAutoSendToRegistry.WatchDatabaseAndSendToRegistry - Class in com.pixelmed.apps
DoseReporterWithLegacyOCRAndAutoSendToRegistry.WatchRemoteAEsForNewDoseInformation - Class in com.pixelmed.apps
DoseSummationType - Static variable in class com.pixelmed.dicom.TagFromName
DoseUtility - Class in com.pixelmed.apps: This class is an application for retrieving dose information about DICOM studies of patients.
DoseUtility(String) - Constructor for class com.pixelmed.apps.DoseUtility
DoseUtility.ConfigureActionListener - Class in com.pixelmed.apps
DoseUtility.ImportActionListener - Class in com.pixelmed.apps
DoseUtility.ImportWorker - Class in com.pixelmed.apps
DoseUtility.LogActionListener - Class in com.pixelmed.apps
DoseUtility.MakeSRActionListener - Class in com.pixelmed.apps
DoseUtility.MakeSRWorker - Class in com.pixelmed.apps
DoseUtility.OurMediaImporter - Class in com.pixelmed.apps
DoseUtility.OurMultipleInstanceTransferStatusHandler - Class in com.pixelmed.apps
DoseUtility.OurQueryTreeBrowser - Class in com.pixelmed.apps
DoseUtility.OurReceivedObjectHandler - Class in com.pixelmed.apps
DoseUtility.OurSourceDatabaseTreeBrowser - Class in com.pixelmed.apps
DoseUtility.PurgeActionListener - Class in com.pixelmed.apps
DoseUtility.PurgeWorker - Class in com.pixelmed.apps
DoseUtility.QueryActionListener - Class in com.pixelmed.apps
DoseUtility.QueryWorker - Class in com.pixelmed.apps
DoseUtility.RegistryActionListener - Class in com.pixelmed.apps
DoseUtility.RegistryWorker - Class in com.pixelmed.apps
DoseUtility.ReportActionListener - Class in com.pixelmed.apps
DoseUtility.ReportWorker - Class in com.pixelmed.apps
DoseUtility.RetrieveActionListener - Class in com.pixelmed.apps
DoseUtility.SendActionListener - Class in com.pixelmed.apps
DoseUtility.SendWorker - Class in com.pixelmed.apps
DoseUtility.ValidateActionListener - Class in com.pixelmed.apps
DoseUtility.ValidateWorker - Class in com.pixelmed.apps
DoseUtility.ViewActionListener - Class in com.pixelmed.apps
DoseUtility.ViewWorker - Class in com.pixelmed.apps
DOSIMETER - Static variable in class com.pixelmed.dose.SourceOfDoseInformation
doSomethingMoreWithWhateverWasSelected() - Method in class com.pixelmed.apps.DoseUtility.OurSourceDatabaseTreeBrowser
doSomethingMoreWithWhateverWasSelected() - Method in class com.pixelmed.apps.DownloadOrTransmit.OurSourceDatabaseTreeBrowser
doSomethingMoreWithWhateverWasSelected() - Method in class com.pixelmed.database.DatabaseTreeBrowser: Will be called when a double-click event is detected unless buildMouseListenerToDetectDoubleClickEvents is overriden to do something else.
doSomethingMoreWithWhateverWasSelected() - Method in class com.pixelmed.dicom.DicomDirectoryBrowser
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.AddHierarchicalEvidenceSequencetoStructuredReports.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.CheckAllUIDReferencesResolve.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.CompressDicomFiles: Compress the DICOM file.
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.ConvertSRTCodesToSCT.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.CopyOnlyHeadOfMultipleStructuredReportsAndReferences.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.DecompressDicomFiles: Do something with the referenced DICOM file that has been encountered.
doSomethingWithDicomFileOnMedia(String, String, String) - Method in class com.pixelmed.apps.DeidentifyAndRedact.OurMediaImporter: Deidentify both the DICOM Attributes and the Pixel Data using the RedactionRegions specified in the constructor.
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.DoseUtility.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.DownloadOrTransmit.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.FindAndCopySelectedDicomFiles: Do something with the referenced DICOM file that has been encountered.
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.InsertCodeSequence.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.InsertRealWorldValueMap.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.MergeCompositeContext.OurFirstPassMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.MergeCompositeContext.OurSecondPassMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.MergeCompositeContextForOneEntitySelectively.OurFirstPassMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.MergeCompositeContextForOneEntitySelectively.OurSecondPassMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.MergeConcatenationInstances.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.MergeFunctionalGroups.OurFirstPassMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.MergeFunctionalGroups.OurSecondPassMediaImporter
doSomethingWithDicomFileOnMedia(String, String, String) - Method in class com.pixelmed.apps.PseudonymizeAndSequester.OurMediaImporter: De-identify the DICOM Attributes and pseudonymize them and sequester if may have risk of identity leakage.
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.RemapFrameOfReferenceUIDs.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.RemapUIDs.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.RotateFlipSetOfImages.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.SetCharacteristicsFromSummary.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.TranslateImagePositionPatient.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.apps.UIDMapByMatchingPixelData.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.database.DatabaseMediaImporter: Makes a copy of the DICOM file in the temporary folder, reads the DICOM attributes to extract the necessary information and inserts a reference to the copied file in the database.
doSomethingWithDicomFileOnMedia(String, String, String) - Method in class com.pixelmed.dicom.MediaImporter: Do something with the referenced DICOM file that has been encountered.
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.dicom.MediaImporter: Do something with the referenced DICOM file that has been encountered.
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.display.DicomCleaner.OurMediaImporter
doSomethingWithDicomFileOnMedia(String) - Method in class com.pixelmed.network.NetworkMediaImporter: Adds the specified file name and its characteristics to the list to be transferred.
doSomethingWithIdentifier(AttributeList) - Method in class com.pixelmed.network.IdentifierHandler: Called when a response identifier has been received.
doSomethingWithIdentifier(AttributeList) - Method in class com.pixelmed.query.QueryTreeRecord.OurResponseIdentifierHandler
doSomethingWithProcessedDicomFile(String) - Method in class com.pixelmed.apps.StudyReceiver: Do something with the processed DICOM file.
doSomethingWithReceivedDicomFile(String, String, String, String) - Method in class com.pixelmed.apps.InstanceReceiver: Do something with the received DICOM file.
doSomethingWithReceivedDicomFile(String, String, String, String) - Method in class com.pixelmed.apps.ProcessReceivedWholeSlideImagesMakeTiledPyramidAndSend: Process any single high resolution tiled whole slide image received to produce a multi-resolution pyramid set of images.
doSomethingWithReceivedDicomFile(String, String, String, String) - Method in class com.pixelmed.apps.StudyReceiver: Do something with the received DICOM file.
doSomethingWithSelectedFiles(Vector) - Method in class com.pixelmed.database.DatabaseTreeBrowser: Will be called when a selection is made or changed and doSomethingWithSelections() returns false and not otherwise.
doSomethingWithSelectedFiles(Vector) - Method in class com.pixelmed.dicom.DicomDirectoryBrowser
doSomethingWithSelectedFiles(Vector) - Method in class com.pixelmed.display.DicomCleaner.OurDestinationDatabaseTreeBrowser
doSomethingWithSelectedFiles(Vector) - Method in class com.pixelmed.display.DicomCleaner.OurSourceDatabaseTreeBrowser
doSomethingWithSelectedSOPInstances(Vector) - Method in class com.pixelmed.display.DisplayStructuredReportBrowser
doSomethingWithSelections(DatabaseTreeRecord[]) - Method in class com.pixelmed.database.DatabaseTreeBrowser: Will be called when a selection is made or changed.
doSomethingWithSelections(DatabaseTreeRecord[]) - Method in class com.pixelmed.display.DicomCleaner.OurDestinationDatabaseTreeBrowser
doSomethingWithSelections(DatabaseTreeRecord[]) - Method in class com.pixelmed.display.DicomCleaner.OurSourceDatabaseTreeBrowser
doSomethingWithUnwantedFileOnMedia(String, String, String) - Method in class com.pixelmed.apps.CompressDicomFiles: Log that file cannot be compressed.
doSomethingWithUnwantedFileOnMedia(String, String, String) - Method in class com.pixelmed.dicom.MediaImporter: Do something with the unwanted (possibly DICOM file) that has been encountered.
DOTRANGE - Static variable in class com.pixelmed.convert.TIFFTags
DOUBLE - Static variable in class com.pixelmed.convert.TIFFTypes
DoubleFloatPixelData - Static variable in class com.pixelmed.dicom.TagFromName
DownloadOrTransmit - Class in com.pixelmed.apps: This class is an application for retrieving DICOM studies of patients and downloading or transmitting them.
DownloadOrTransmit(String) - Constructor for class com.pixelmed.apps.DownloadOrTransmit
DownloadOrTransmit.ConfigureActionListener - Class in com.pixelmed.apps
DownloadOrTransmit.ExportActionListener - Class in com.pixelmed.apps
DownloadOrTransmit.ExportWorker - Class in com.pixelmed.apps
DownloadOrTransmit.FtpSendActionListener - Class in com.pixelmed.apps
DownloadOrTransmit.FtpSendWorker - Class in com.pixelmed.apps
DownloadOrTransmit.ImportActionListener - Class in com.pixelmed.apps
DownloadOrTransmit.ImportWorker - Class in com.pixelmed.apps
DownloadOrTransmit.LogActionListener - Class in com.pixelmed.apps
DownloadOrTransmit.OurMediaImporter - Class in com.pixelmed.apps
DownloadOrTransmit.OurMultipleInstanceTransferStatusHandler - Class in com.pixelmed.apps
DownloadOrTransmit.OurQueryTreeBrowser - Class in com.pixelmed.apps
DownloadOrTransmit.OurReceivedObjectHandler - Class in com.pixelmed.apps
DownloadOrTransmit.OurSourceDatabaseTreeBrowser - Class in com.pixelmed.apps
DownloadOrTransmit.PurgeActionListener - Class in com.pixelmed.apps
DownloadOrTransmit.PurgeWorker - Class in com.pixelmed.apps
DownloadOrTransmit.QueryActionListener - Class in com.pixelmed.apps
DownloadOrTransmit.QueryWorker - Class in com.pixelmed.apps
DownloadOrTransmit.RetrieveActionListener - Class in com.pixelmed.apps
DownloadOrTransmit.RetrieveWorker - Class in com.pixelmed.apps
DownloadOrTransmit.SendActionListener - Class in com.pixelmed.apps
DownloadOrTransmit.SendWorker - Class in com.pixelmed.apps
DownloadOrTransmit.ViewActionListener - Class in com.pixelmed.apps
DownloadOrTransmit.ViewWorker - Class in com.pixelmed.apps
downsamplePixelData(AttributeList, AttributeList, TiledFramesIndex, int, int, int, int, int, int, int, int, int, int, String) - Static method in class com.pixelmed.apps.TiledPyramid
drawHorizontallyCenteredString(String, boolean, Graphics2D, Component, int) - Static method in class com.pixelmed.display.TextAnnotationPositioned
DrawingUtilities - Class in com.pixelmed.display: A class to provide various static methods for drawing.
DrawingUtilities() - Constructor for class com.pixelmed.display.DrawingUtilities
drawLinesBetweenAnyPointsWhichIntersectPlaneWhereZIsZero(Point3d[]) - Method in class com.pixelmed.geometry.LocalizerPoster
drawOutlineOnLocalizer(Vector) - Method in class com.pixelmed.geometry.LocalizerPoster
drawOutlineOnLocalizer(Point3d[]) - Method in class com.pixelmed.geometry.LocalizerPoster
drawPositionedString(TextAnnotationPositioned, Graphics2D, Component, int, int) - Static method in class com.pixelmed.display.TextAnnotationPositioned
drawPositionedString(TextAnnotationPositioned, Graphics2D, int, int, int, int) - Static method in class com.pixelmed.display.TextAnnotationPositioned
drawPositionedString(TextAnnotationPositioned, Graphics2D, FontMetrics, int, int, int, int, int) - Static method in class com.pixelmed.display.TextAnnotationPositioned
drawPositionedString(String, boolean, boolean, int, Graphics2D, Component, int, int) - Static method in class com.pixelmed.display.TextAnnotationPositioned
drawPositionedString(String, boolean, boolean, int, Graphics2D, FontMetrics, int, int, int, int, int) - Static method in class com.pixelmed.display.TextAnnotationPositioned
drawShadowedShape(Shape, Graphics2D) - Static method in class com.pixelmed.display.DrawingUtilities
drawShadowedString(String, int, int, Graphics2D) - Static method in class com.pixelmed.display.DrawingUtilities
drawVerticallyCenteredString(String, boolean, Graphics2D, Component, int) - Static method in class com.pixelmed.display.TextAnnotationPositioned
drawVerticallyCenteredString(String, boolean, Graphics2D, Component, int, int) - Static method in class com.pixelmed.display.TextAnnotationPositioned
DS - Static variable in class com.pixelmed.dicom.ValueRepresentation
dstDatabase - Variable in class com.pixelmed.display.DicomCleaner
dstDatabasePanel - Variable in class com.pixelmed.display.DicomCleaner
dstFolderName - Variable in class com.pixelmed.apps.InsertCodeSequence
dstFolderName - Variable in class com.pixelmed.apps.InsertRealWorldValueMap
dstFolderName - Variable in class com.pixelmed.apps.MergeCompositeContext
dstFolderName - Variable in class com.pixelmed.apps.MergeCompositeContextForOneEntitySelectively
dstFolderName - Variable in class com.pixelmed.apps.MergeFunctionalGroups
dstFolderName - Variable in class com.pixelmed.apps.RotateFlipSetOfImages
dstFolderName - Variable in class com.pixelmed.apps.SetCharacteristicsFromSummary
DT - Static variable in class com.pixelmed.dicom.ValueRepresentation
dump() - Method in class com.pixelmed.database.DatabaseTreeRecord: Dump the contents of the node.
dump() - Method in class com.pixelmed.dicom.TransferSyntax: Describe the characteristics of Transfer Syntax.
dump(byte[], int, int) - Static method in class com.pixelmed.utils.HexDump: Create a dump of the decimal offset, hexadecimal values and printable string values of a byte array.
dump(byte[], int) - Static method in class com.pixelmed.utils.HexDump: Create a dump of the decimal offset, hexadecimal values and printable string values of a byte array.
dump(byte[]) - Static method in class com.pixelmed.utils.HexDump: Create a dump of the decimal offset, hexadecimal values and printable string values of a byte array.
dump(String, int, int) - Static method in class com.pixelmed.utils.HexDump: Create a dump of the decimal offset, hexadecimal values of the Unicode code points and printable string values of a String.
dump(String, int) - Static method in class com.pixelmed.utils.HexDump: Create a dump of the decimal offset, hexadecimal values of the Unicode code points and printable string values of a String.
dump(String) - Static method in class com.pixelmed.utils.HexDump: Create a dump of the decimal offset, hexadecimal values of the Unicode code points and printable string values of a String.
dump(String) - Static method in class com.pixelmed.utils.StringUtilities: Create a dump of the decimal offset, hexadecimal values and printable string values of a String.
dump(char[]) - Static method in class com.pixelmed.utils.StringUtilities: Create a dump of the decimal offset, hexadecimal values and printable string values of an array of char.
dumpAllFramesAndChildren(PrintStream, String, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
dumpAllFramesAndChildren(PrintStream) - Static method in class com.pixelmed.test.UserInterfaceUtilities
dumpAllOwnedWindows(Window, PrintStream, String, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
dumpAllOwnedWindows(Window[], PrintStream, String, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
dumpAllOwnedWindows(PrintStream, String, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
dumpAllOwnedWindows(PrintStream) - Static method in class com.pixelmed.test.UserInterfaceUtilities
dumpAttributeListFromCommandOrData(byte[], String) - Static method in class com.pixelmed.network.CompositeResponseHandler: Extract an AttributeList from the concatenated bytes that have been assembled from one or more PDUs and which make up an entire Command or Dataset.
dumpBufferCapabilities(BufferCapabilities, String, String) - Static method in class com.pixelmed.display.DescribeGraphicsEnvironment
dumpComponentAndChildren(Component, PrintStream, String, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
dumpComponentAndChildren(Component, PrintStream) - Static method in class com.pixelmed.test.UserInterfaceUtilities
dumpDisplayMode(DisplayMode, String, String) - Static method in class com.pixelmed.display.DescribeGraphicsEnvironment
dumper - Variable in class com.pixelmed.network.NetworkConfigurationSource
dumpGraphicsConfiguration(GraphicsConfiguration, String, String) - Static method in class com.pixelmed.display.DescribeGraphicsEnvironment
dumpGraphicsDevice(GraphicsDevice, String, String) - Static method in class com.pixelmed.display.DescribeGraphicsEnvironment
dumpGraphicsEnvironment(GraphicsEnvironment, String, String) - Static method in class com.pixelmed.display.DescribeGraphicsEnvironment
dumpGroups() - Method in class com.pixelmed.apps.MergeCompositeContext
dumpImageCapabilities(ImageCapabilities, String, String) - Static method in class com.pixelmed.display.DescribeGraphicsEnvironment
dumpListOfAllAvailableReaders(PrintStream) - Static method in class com.pixelmed.utils.CapabilitiesAvailable
dumpListOfAllAvailableWriters(PrintStream) - Static method in class com.pixelmed.utils.CapabilitiesAvailable
dumpPDVList(LinkedList) - Method in class com.pixelmed.network.ReceivedDataHandler: Dump a list of the Presentation Data Values supplied to standard error
dumpPDVListToString(LinkedList) - Method in class com.pixelmed.network.ReceivedDataHandler: Log a list of the Presentation Data Values supplied at the debug level
dumpRootPaneAndChildren(PrintStream, String, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
dumpRootPaneAndChildren(PrintStream) - Static method in class com.pixelmed.test.UserInterfaceUtilities
dumpShape(Shape) - Static method in class com.pixelmed.geometry.LocalizerPosterFactory
dumpShapes(Vector) - Static method in class com.pixelmed.geometry.LocalizerPosterFactory
DVHData - Static variable in class com.pixelmed.dicom.TagFromName

E

earliestDateByOrignalPatientID - Variable in class com.pixelmed.apps.PseudonymizeAndSequester
earliestDatesIndexedBySourceFilePath - Variable in class com.pixelmed.display.DicomCleaner
EarliestYearActionListener() - Constructor for class com.pixelmed.display.DicomCleaner.EarliestYearActionListener
ECGPanel - Class in com.pixelmed.displaywave: Implements a component that can display an array of tiles, each of which is a 2D graph of ECG values.
ECGPanel(short[][], int, int, String[], int, int, float, float[], float, float, float, int[], int, int) - Constructor for class com.pixelmed.displaywave.ECGPanel: Construct a component containing an array of tiles of ECG waveforms.
ECGViewer - Class in com.pixelmed.displaywave: This class is an entire application for displaying and viewing DICOM and SCP ECG waveforms.
EchoNumbers - Static variable in class com.pixelmed.dicom.TagFromName
EchoTime - Static variable in class com.pixelmed.dicom.TagFromName
EchoTrainLength - Static variable in class com.pixelmed.dicom.TagFromName
EditRemoteAEActionListener() - Constructor for class com.pixelmed.network.NetworkApplicationConfigurationDialog.EditRemoteAEActionListener
EditRemoteHostActionListener() - Constructor for class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog.EditRemoteHostActionListener
ElectromyogramWaveformStorage - Static variable in class com.pixelmed.dicom.SOPClass
ElectrooculogramWaveformStorage - Static variable in class com.pixelmed.dicom.SOPClass
elideSeparateContinuityOfContent - Static variable in class com.pixelmed.dicom.JSONRepresentationOfStructuredReportObjectFactory
EMERG - Static variable in class com.pixelmed.utils.Syslog
EncapsulateCompressedPixelData - Class in com.pixelmed.convert: A class to create a DICOM image format file encoded in a compressed transfer syntax with the compressed bitstreams supplied from files.
EncapsulateCompressedPixelData() - Constructor for class com.pixelmed.convert.EncapsulateCompressedPixelData
EncapsulateData - Class in com.pixelmed.convert: A class to create a DICOM encapsulated data object from a data file and supplied metadata and/or composite context.
EncapsulateData(String, String, String, String) - Constructor for class com.pixelmed.convert.EncapsulateData: Create a DICOM encapsulated data object from a data file and supplied metadata
EncapsulatedCDAStorage - Static variable in class com.pixelmed.dicom.SOPClass
encapsulatedDocument - Static variable in class com.pixelmed.dicom.DicomDirectoryRecordType
EncapsulatedDocument - Static variable in class com.pixelmed.dicom.TagFromName
EncapsulatedDocumentLength - Static variable in class com.pixelmed.dicom.TagFromName
EncapsulatedInputStream - Class in com.pixelmed.dicom: A class that extends InputStream by adding a mechanism for unencapsulating an undefined length DICOM attribute, such as is used for compressed Pixel Data.
EncapsulatedInputStream(BinaryInputStream, boolean, boolean) - Constructor for class com.pixelmed.dicom.EncapsulatedInputStream: Construct a byte ordered stream from the supplied stream.
EncapsulatedInputStream(BinaryInputStream) - Constructor for class com.pixelmed.dicom.EncapsulatedInputStream: Construct a byte ordered stream from the supplied stream.
EncapsulatedPDFStorage - Static variable in class com.pixelmed.dicom.SOPClass
encapsulatedPixelData - Variable in class com.pixelmed.dicom.TransferSyntax
EncapsulatedSTLStorage - Static variable in class com.pixelmed.dicom.SOPClass
EncapsulateImageInDicom - Class in com.pixelmed.dicom: A class for encapsulating compressed grayscale or RGB consumer image format input files (that JIIO can recognize) into DICOM images of a specified SOP Class, or single or multi frame DICOM Secondary Capture images.
EncapsulateImageInDicom(String, String, String, String, String, String, String, String, String, AttributeList) - Constructor for class com.pixelmed.dicom.EncapsulateImageInDicom: Read a consumer image format input file (anything JIIO can recognize), and create a DICOM image of the specified SOP Class, or a single or multi frame DICOM Secondary Capture image.
encode(String) - Method in class com.pixelmed.utils.PhoneticStringEncoder
encoder - Variable in class com.pixelmed.utils.PhoneticStringEncoder
encoderClass - Variable in class com.pixelmed.utils.PhoneticStringEncoder
encounteredTrappedExceptions() - Method in class com.pixelmed.network.StorageSOPClassSCU
EncryptedAttributesSequence - Static variable in class com.pixelmed.dicom.TagFromName
EncryptedContentTransferSyntaxUID - Static variable in class com.pixelmed.dicom.TagFromName
endDateTime - Variable in class com.pixelmed.dose.CTDose
endDirection - Variable in class com.pixelmed.dose.ScanRange
endLocation - Variable in class com.pixelmed.dose.ScanRange
EndMessageID - Static variable in class com.pixelmed.dicom.TagFromName
endProgressBar() - Method in class com.pixelmed.display.SafeProgressBarUpdaterThread
endProgressBar(SafeProgressBarUpdaterThread) - Static method in class com.pixelmed.display.SafeProgressBarUpdaterThread
EnhancedCTImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
EnhancedMRColorImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
EnhancedMRImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
EnhancedPETImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
EnhancedSRStorage - Static variable in class com.pixelmed.dicom.SOPClass
EnhancedUSVolumeStorage - Static variable in class com.pixelmed.dicom.SOPClass
EnhancedXAImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
EnhancedXRFImageStorage - Static variable in class com.pixelmed.dicom.SOPClass
entireBodyDefaultAnatomy - Static variable in class com.pixelmed.dose.CTDoseAcquisition
entries - Variable in class com.pixelmed.convert.TIFFImageFileDirectory
entriesIndexedBySOPInstanceUID - Variable in class com.pixelmed.dicom.ImageLibrary
epochForDateModification - Static variable in class com.pixelmed.apps.PseudonymizeAndSequester
epsilonEquals(double, double, double) - Method in class com.pixelmed.test.TestGeometryOfSlice
epsilonEquals(double[], double[], double) - Method in class com.pixelmed.test.TestGeometryOfSlice
equals(Object) - Method in class com.pixelmed.anatproc.Concept: Indicates whether some other object is "equal to" this one.
equals(Object) - Method in class com.pixelmed.anatproc.SchemeAndValuePair
equals(Object) - Method in class com.pixelmed.database.DatabaseTreeRecord
equals(Object) - Method in class com.pixelmed.dicom.AttributeList
equals(Object) - Method in class com.pixelmed.dicom.AttributeTag: Compare tags based on their group and element values.
equals(Object) - Method in class com.pixelmed.dicom.AttributeTreeRecord
equals(Object) - Method in class com.pixelmed.dicom.CodedSequenceItem
equals(Object) - Method in class com.pixelmed.dicom.CompositeInstanceContext
equals(Object) - Method in class com.pixelmed.dicom.DicomDirectoryRecord
equals(Object) - Method in class com.pixelmed.dose.CTAcquisitionParameters
equals(Object) - Method in class com.pixelmed.dose.CTDoseAcquisition
equals(Object) - Method in class com.pixelmed.dose.CTDoseCheckDetails
equals(Object) - Method in class com.pixelmed.dose.ScanRange
equals(Object) - Method in class com.pixelmed.event.EventContext
equals(Object) - Method in class com.pixelmed.ftp.FTPRemoteHost
equals(Object) - Method in class com.pixelmed.ftp.FTPSecurityType
equals(Object) - Method in class com.pixelmed.network.ApplicationEntity
equals(Object) - Method in class com.pixelmed.network.PresentationAddress
equals(Object) - Method in class com.pixelmed.query.QueryTreeRecord
equals(Object) - Method in class com.pixelmed.scpecg.SCPTreeRecord
equals(Object) - Method in class com.pixelmed.transfermonitor.TransferMonitoringContext
equalsApartFromIrradiationEventUID(CTAcquisitionParameters) - Method in class com.pixelmed.dose.CTAcquisitionParameters
equipment - Variable in class com.pixelmed.dicom.CompositeInstanceContext.Selector
EquipmentFrameOfReferenceUID - Static variable in class com.pixelmed.dicom.TagFromName
ERR - Static variable in class com.pixelmed.utils.Syslog
error(String) - Method in class com.pixelmed.slf4j.Logger: Log a message at the ERROR level.
error(String, Object...) - Method in class com.pixelmed.slf4j.Logger: Log a message at the ERROR level.
error(String, Throwable) - Method in class com.pixelmed.slf4j.Logger: Log an exception (throwable) at the ERROR level with an accompanying message.
ErrorComment - Static variable in class com.pixelmed.dicom.TagFromName
errorEnabled - Variable in class com.pixelmed.slf4j.Logger
establishInitialWindowOrVOILUT() - Method in class com.pixelmed.display.SingleImagePanel
establishStatisticalWindow() - Method in class com.pixelmed.display.SingleImagePanel
EstimatedRadiographicMagnificationFactor - Static variable in class com.pixelmed.dicom.TagFromName
EthnicGroup - Static variable in class com.pixelmed.dicom.TagFromName
evaluateStatusAndSetSuccess(AttributeList) - Method in class com.pixelmed.network.CompositeResponseHandler: Extract the status information from a composite response and set the status flag accordingly.
evaluateStatusAndSetSuccess(AttributeList) - Method in class com.pixelmed.network.MoveSOPClassSCU.CMoveResponseHandler
evaluateStatusAndSetSuccess(AttributeList) - Method in class com.pixelmed.network.StorageSOPClassSCU.CStoreResponseHandler
evaluateStatusAndSetSuccess(AttributeList) - Method in class com.pixelmed.network.VerificationSOPClassSCU.CEchoResponseHandler
Event - Class in com.pixelmed.event
Event() - Constructor for class com.pixelmed.event.Event
Event(Object) - Constructor for class com.pixelmed.event.Event
Event(Object, EventContext) - Constructor for class com.pixelmed.event.Event
Event(EventContext) - Constructor for class com.pixelmed.event.Event
EventContext - Class in com.pixelmed.event
EventContext(String) - Constructor for class com.pixelmed.event.EventContext
EventDispatcher - Interface in com.pixelmed.event
exact - Variable in class com.pixelmed.apps.FindAndCopySelectedDicomFiles
exactCalculation - Static variable in class com.pixelmed.display.event.WindowLinearCalculationChangeEvent
excludeList - Variable in class com.pixelmed.database.MapTableModel
excludeList - Variable in class com.pixelmed.dicom.AttributeListTableModel
ExecuteTranslet - Class in com.pixelmed.utils: Use a translet from an XSL-T source file to transform one XML file to another.
ExecuteTranslet() - Constructor for class com.pixelmed.utils.ExecuteTranslet
EXIFIFD - Static variable in class com.pixelmed.convert.TIFFTags
existingTestFileToBeCleaned - Static variable in class com.pixelmed.test.TestCleanerReceiveAndClean
exp_date - Variable in class com.pixelmed.convert.AnalyzeHeader
exp_time - Variable in class com.pixelmed.convert.AnalyzeHeader
expandArray(short[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding one element to the end.
expandArray(short[], int) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding elements to the end.
expandArray(short[][]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding one element to the end.
expandArray(short[][], int) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding elements to the end.
expandArray(int[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding one element to the end.
expandArray(int[], int) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding elements to the end.
expandArray(long[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding one element to the end.
expandArray(long[], int) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding elements to the end.
expandArray(float[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding one element to the end.
expandArray(float[], int) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding elements to the end.
expandArray(double[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding one element to the end.
expandArray(double[], int) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding elements to the end.
expandArray(String[]) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding one element to the end.
expandArray(String[], int) - Static method in class com.pixelmed.dicom.ArrayCopyUtilities: Expand an array by adding elements to the end.
ExpectedResult(AttributeTag, boolean, boolean, String, String) - Constructor for class com.pixelmed.test.TestCleanerReceiveAndClean.ExpectedResult
explanation - Variable in class com.pixelmed.apps.InsertRealWorldValueMap
explicitVR - Variable in class com.pixelmed.dicom.TransferSyntax
ExplicitVRBigEndian - Static variable in class com.pixelmed.dicom.TransferSyntax
ExplicitVRLittleEndian - Static variable in class com.pixelmed.dicom.TransferSyntax
ExportActionListener() - Constructor for class com.pixelmed.apps.DownloadOrTransmit.ExportActionListener
ExportActionListener() - Constructor for class com.pixelmed.display.DicomCleaner.ExportActionListener
exportButtonLabel - Static variable in class com.pixelmed.apps.DownloadOrTransmit
exportButtonToolTipText - Static variable in class com.pixelmed.apps.DownloadOrTransmit
exportDirectoryPath - Variable in class com.pixelmed.apps.DownloadOrTransmit
exportDirectoryPath - Variable in class com.pixelmed.display.DicomCleaner
exportedZipFileName - Static variable in class com.pixelmed.apps.DownloadOrTransmit
exportedZipFileName - Static variable in class com.pixelmed.display.DicomCleaner
exportFiles(Vector<String>, File, String, SafeProgressBarUpdaterThread, MessageLogger, boolean, boolean, boolean, String) - Static method in class com.pixelmed.apps.DownloadOrTransmit
exposedRangeInMM - Variable in class com.pixelmed.dose.CTAcquisitionParameters
EXPOSURE - Static variable in class com.pixelmed.display.DemographicAndTechniqueAnnotations
ExposureDoseSequence - Class in com.pixelmed.doseocr: A class to extract Exposure Dose Sequence and related attributes from Philips modality dose report screen saves.
ExposureDoseSequence() - Constructor for class com.pixelmed.doseocr.ExposureDoseSequence
EXPOSURETIME - Static variable in class com.pixelmed.display.DemographicAndTechniqueAnnotations
exposureTimeInSeconds - Variable in class com.pixelmed.dose.CTAcquisitionParameters
exposureTimePerRotation - Variable in class com.pixelmed.dose.CTAcquisitionParameters
extendCreateStatementStringWithAnyExtraAttributes(StringBuffer, InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: Extend a SQL CREATE TABLE statement in the process of being constructed with any additional attributes (columns) that the model requires.
extendCreateStatementStringWithAnyExtraAttributes(StringBuffer, InformationEntity) - Method in class com.pixelmed.database.PatientStudySeriesConcatenationInstanceModel
extendCreateStatementStringWithDerivedAttributes(StringBuffer, InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: Extend a SQL CREATE TABLE statement in the process of being constructed with any derived attributes (columns) that the model requires.
extendCreateStatementStringWithDerivedAttributes(StringBuffer, InformationEntity) - Method in class com.pixelmed.database.DicomDatabaseInformationModel: Extend a SQL CREATE TABLE statement in the process of being constructed with any derived attributes (columns) that the model requires.
extendCreateStatementStringWithUserColumns(StringBuffer, InformationEntity) - Method in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry.OurPatientStudySeriesInstanceModel
extendCreateStatementStringWithUserColumns(StringBuffer, InformationEntity) - Method in class com.pixelmed.apps.StudyReceiver.OurPatientStudySeriesInstanceModel
extendCreateStatementStringWithUserColumns(StringBuffer, InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: Extend a SQL CREATE TABLE statement in the process of being constructed with any user optional columns that the model requires.
extendInsertStatementStringWithAttributeNamesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the names of the attributes in the instance for the entity.
extendInsertStatementStringWithAttributeNamesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DicomDatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the names of the attributes in the instance for the entity.
extendInsertStatementStringWithAttributeValuesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity, String, String) - Method in class com.pixelmed.database.DatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the values of the attributes in the instance for the entity.
extendInsertStatementStringWithAttributeValuesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity, String, String) - Method in class com.pixelmed.database.DicomDatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the values of the attributes in the instance for the entity.
extendInsertStatementStringWithDerivedAttributeNamesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the names of the derived attributes in the instance for the entity.
extendInsertStatementStringWithDerivedAttributeNamesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DicomDatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the names of the derived attributes in the instance for the entity.
extendInsertStatementStringWithDerivedAttributeValuesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the values of the derived attributes in the instance for the entity.
extendInsertStatementStringWithDerivedAttributeValuesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DicomDatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the values of the derived attributes in the instance for the entity.
extendInsertStatementStringWithPersonNameSearchColumnsForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the names of the additional search columns derived from person name attributes in the instance for the entity.
extendInsertStatementStringWithPersonNameSearchColumnsForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DicomDatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the names of the additional search columns derived from person name attributes in the instance for the entity.
extendInsertStatementStringWithPersonNameSearchValuesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the values of the additional search columns derived from person name attributes in the instance for the entity.
extendInsertStatementStringWithPersonNameSearchValuesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DicomDatabaseInformationModel: Extend a SQL INSERT statement in the process of being constructed with the values of the additional search columns derived from person name attributes in the instance for the entity.
extendStatementStringWithMatchingAttributesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: Extend a SQL SELECT statement in the process of being constructed with matching clauses for the unique keys of the entity and all its parents.
extendStatementStringWithMatchingAttributesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.MinimalPatientStudySeriesInstanceModel
extendStatementStringWithMatchingAttributesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.PatientStudySeriesConcatenationInstanceModel
extendStatementStringWithMatchingAttributesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.StudySeriesInstanceModel
extendStatementStringWithMatchingAttributesForSelectedInformationEntity(StringBuffer, AttributeList, InformationEntity) - Method in class com.pixelmed.database.StudySeriesInstanceSelectiveMatchModel
ExtensibleSRStorage - Static variable in class com.pixelmed.dicom.SOPClass
externalServerInstance - Variable in class com.pixelmed.database.DatabaseInformationModel
extractBytes(byte[], int, int) - Static method in class com.pixelmed.utils.ByteArray: Extract a portion of a byte array into a new byte array.
extractRadiationDoseSRFiles(Vector) - Method in class com.pixelmed.apps.DoseUtility
extractValues(int, byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues
extractValues(byte[], int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFAsciiValues
extractValues(byte[], int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFByteValues
extractValues(byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFIfd8Values
extractValues(byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFIfdValues
extractValues(byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFLong8Values
extractValues(byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFLongValues
extractValues(byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFRationalValues
extractValues(byte[], int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFSByteValues
extractValues(byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFShortValues
extractValues(byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFSlong8Values
extractValues(byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFSLongValues
extractValues(byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFSRationalValues
extractValues(byte[], ByteOrder, int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFSShortValues
extractValues(byte[], int) - Static method in class com.pixelmed.convert.TIFFValues.TIFFUndefinedValues
EXTRASAMPLES - Static variable in class com.pixelmed.convert.TIFFTags

F

f - Variable in class com.pixelmed.convert.TIFFImageFileDirectories
failedSet - Variable in class com.pixelmed.apps.DeidentifyAndRedact
FAXDCS - Static variable in class com.pixelmed.convert.TIFFTags
FAXPROFILE - Static variable in class com.pixelmed.convert.TIFFTags
FAXRECVPARAMS - Static variable in class com.pixelmed.convert.TIFFTags
FAXRECVTIME - Static variable in class com.pixelmed.convert.TIFFTags
FAXSUBADDRESS - Static variable in class com.pixelmed.convert.TIFFTags
FD - Static variable in class com.pixelmed.dicom.ValueRepresentation
FEDEX_EDR - Static variable in class com.pixelmed.convert.TIFFTags
fiducial - Static variable in class com.pixelmed.dicom.DicomDirectoryRecordType
FiducialUID - Static variable in class com.pixelmed.dicom.TagFromName
field_skip - Variable in class com.pixelmed.convert.AnalyzeHeader
FieldOfViewDimensionsInFloat - Static variable in class com.pixelmed.dicom.TagFromName
FieldOfViewHorizontalFlip - Static variable in class com.pixelmed.dicom.TagFromName
FieldOfViewOrigin - Static variable in class com.pixelmed.dicom.TagFromName
FieldOfViewRotation - Static variable in class com.pixelmed.dicom.TagFromName
FieldOfViewShape - Static variable in class com.pixelmed.dicom.TagFromName
fields - Variable in class com.pixelmed.convert.NRRDHeader
file - Variable in class com.pixelmed.dicom.OtherAttributeOnDisk
FILE_COPIED - Static variable in class com.pixelmed.database.DatabaseInformationModel
FILE_REFERENCED - Static variable in class com.pixelmed.database.DatabaseInformationModel
FileMetaInformation - Class in com.pixelmed.dicom: A class to abstract the contents of a file meta information header as used for a DICOM PS 3.10 file, with additional static methods to add to and extract from an existing list of attributes.
FileMetaInformation(String, String, String, String) - Constructor for class com.pixelmed.dicom.FileMetaInformation: Construct an instance of the file meta information from the specified parameters.
FileMetaInformationGroupLength - Static variable in class com.pixelmed.dicom.TagFromName
FileMetaInformationVersion - Static variable in class com.pixelmed.dicom.TagFromName
filename - Variable in class com.pixelmed.convert.TIFFFile
fileNameExtension - Variable in class com.pixelmed.dicom.TransferSyntax
FilenameFilterByCaseInsensitiveSuffix - Class in com.pixelmed.utils
FilenameFilterByCaseInsensitiveSuffix(String) - Constructor for class com.pixelmed.utils.FilenameFilterByCaseInsensitiveSuffix
filePrefixForDicomInstanceFilesOnInterchangeMedia - Static variable in class com.pixelmed.apps.DownloadOrTransmit
filePrefixForDicomInstanceFilesOnInterchangeMedia - Static variable in class com.pixelmed.display.DicomCleaner
FileReaper - Class in com.pixelmed.utils
FileReaper() - Constructor for class com.pixelmed.utils.FileReaper
files - Variable in class com.pixelmed.dicom.OtherByteAttributeMultipleCompressedFilesOnDisk
files - Variable in class com.pixelmed.dicom.OtherByteAttributeMultipleCompressedFrames
files - Variable in class com.pixelmed.dicom.OtherByteAttributeMultipleFilesOnDisk
files - Variable in class com.pixelmed.dicom.OtherFloatAttributeMultipleFilesOnDisk
files - Variable in class com.pixelmed.dicom.OtherWordAttributeMultipleFilesOnDisk
filesAlreadyDone - Variable in class com.pixelmed.dose.CTIrradiationEventDataFromImages
FileSetConsistencyFlag - Static variable in class com.pixelmed.dicom.TagFromName
FileSetID - Static variable in class com.pixelmed.dicom.TagFromName
fileSuffixForDicomInstanceFilesOnInterchangeMedia - Static variable in class com.pixelmed.apps.DownloadOrTransmit
fileSuffixForDicomInstanceFilesOnInterchangeMedia - Static variable in class com.pixelmed.display.DicomCleaner
FileUtilities - Class in com.pixelmed.utils: Various static methods helpful for handling files.
FillerOrderNumberImagingServiceRequest - Static variable in class com.pixelmed.dicom.TagFromName
FILLORDER - Static variable in class com.pixelmed.convert.TIFFTags
filter - Variable in class com.pixelmed.query.QueryTreeRecord
FilterPanel - Class in com.pixelmed.query: The FilterPanel class provides a graphical user interface for editing the string values of DICOM attributes in list.
FilterPanel(AttributeList) - Constructor for class com.pixelmed.query.FilterPanel: Display a list of DICOM attributes and their editable string values.
finalize() - Method in class com.pixelmed.database.DatabaseInformationModel
finalize() - Method in class com.pixelmed.dicom.OtherAttributeOnDisk
finalize() - Method in class com.pixelmed.dicom.OtherByteAttributeMultipleFilesOnDisk
finalize() - Method in class com.pixelmed.dicom.OtherFloatAttributeMultipleFilesOnDisk
finalize() - Method in class com.pixelmed.dicom.OtherWordAttributeMultipleFilesOnDisk
finalize() - Method in class com.pixelmed.display.DicomImageBlackout
finalize() - Method in class com.pixelmed.display.SingleImagePanel
finalize() - Method in class com.pixelmed.display.SourceImage
finalize() - Method in class com.pixelmed.display.SpectraPanel
finalize() - Method in class com.pixelmed.utils.FileReaper
find(SchemeAndValuePair) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
find(CodedSequenceItem) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
find(String) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
find(Concept) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
findAllAttributeValuesForAllRecordsForThisInformationEntity(InformationEntity) - Method in class com.pixelmed.database.DatabaseInformationModel: For all records of an information entity, get the values of all the columns in the entity's database table.
findAllAttributeValuesForAllRecordsForThisInformationEntityWithMatchingParent(InformationEntity, InformationEntity, String, String) - Method in class com.pixelmed.database.DatabaseInformationModel: For all records of an information entity with all parents matching a particular attribute value, get the values of all attributes.
findAllAttributeValuesForAllRecordsForThisInformationEntityWithSpecifiedKeyValue(InformationEntity, String, String) - Method in class com.pixelmed.database.DatabaseInformationModel: For all records of an information entity matching the specified key value, get the values of all the columns in the entity's database table.
findAllAttributeValuesForAllRecordsForThisInformationEntityWithSpecifiedParent(InformationEntity, String) - Method in class com.pixelmed.database.DatabaseInformationModel: For all records of an information entity with the specified parent, get the values of all the columns in the entity's database table.
findAllAttributeValuesForAllRecordsForThisInformationEntityWithSpecifiedUID(InformationEntity, String) - Method in class com.pixelmed.database.DatabaseInformationModel: For all records of an information entity matching the specified UID, get the values of all the columns in the entity's database table.
findAllAttributeValuesForSelectedRecord(InformationEntity, String) - Method in class com.pixelmed.database.DatabaseInformationModel: For a particular instance of an information entity, get the values of all the columns in the entity's database table.
findAllContainedReferencedFileNames(DicomDirectoryRecord, String) - Static method in class com.pixelmed.dicom.DicomDirectory: Get all the referenced file names at or below the specified directory record.
findAllContainedReferencedFileNames(String) - Method in class com.pixelmed.dicom.DicomDirectory: Get all the referenced file names in the entire directory.
findAllContainedReferencedFileNamesAndTheirRecords(DicomDirectoryRecord, String) - Static method in class com.pixelmed.dicom.DicomDirectory: Get all the referenced file names at or below the specified directory record, and a map to the directory records that reference them.
findAllContainedReferencedFileNamesAndTheirRecords(String) - Method in class com.pixelmed.dicom.DicomDirectory: Get all the referenced file names in the entire directory, and a map to the directory records that reference them.
findAllContainedSOPInstances(ContentItem, ContentItem) - Static method in class com.pixelmed.dicom.StructuredReport: Find all coordinate and image references within content items of the sub-tree rooted at the specified node (which may be the root).
findAllImagesForFrameOfReference(String) - Method in class com.pixelmed.dicom.DicomDirectory: Get the attribute lists from all the IMAGE level directory records which have a particular FrameOfReferenceUID.
findAllNestedReferencedSOPInstanceUIDs(AttributeList, Set<String>) - Static method in class com.pixelmed.dicom.AttributeList: Find all referenced SOP Instance UIDs that are nested within Sequences in the specified list and add them to the supplied set.
findAllNestedReferencedSOPInstanceUIDs(AttributeList) - Static method in class com.pixelmed.dicom.AttributeList: Find all referenced SOP Instance UIDs that are nested within Sequences in the specified list.
findAllNestedReferencedSOPInstanceUIDs(Set<String>) - Method in class com.pixelmed.dicom.AttributeList: Find all referenced SOP Instance UIDs that are nested within Sequences in this list and add them to the supplied set.
findAllNestedReferencedSOPInstanceUIDs() - Method in class com.pixelmed.dicom.AttributeList: Find all referenced SOP Instance UIDs that are nested within Sequences in this list.
findAmongstGeneralAttributes(AttributeList, DictionaryOfConcepts, String[]) - Static method in class com.pixelmed.anatproc.CTAnatomy
findAmongstGeneralAttributes(AttributeList, DictionaryOfConcepts, String[]) - Static method in class com.pixelmed.anatproc.ProjectionXRayAnatomy
findAnatomicConcept(AttributeList) - Static method in class com.pixelmed.anatproc.CTAnatomy
findAnatomicConcept(AttributeList) - Static method in class com.pixelmed.anatproc.ProjectionXRayAnatomy
FindAndCopySelectedDicomFiles - Class in com.pixelmed.apps: This class copies a set of DICOM files, if they match specified criteria.
FindAndCopySelectedDicomFiles(MessageLogger) - Constructor for class com.pixelmed.apps.FindAndCopySelectedDicomFiles
FindAndCopySelectedDicomFilesUsingDatabase - Class in com.pixelmed.apps: This class copies a set of DICOM files, if they match specified criteria.
FindAndCopySelectedDicomFilesUsingDatabase(DatabaseInformationModel, Set<String>, String) - Constructor for class com.pixelmed.apps.FindAndCopySelectedDicomFilesUsingDatabase
findByConceptIdentifier(String) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
findByConceptUniqueIdentifier(String) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
findCandidateFilesToSendToRegistry(InformationEntity, String, Set<DoseReporterWithLegacyOCRAndAutoSendToRegistry.CandidateFile>, Set<DoseReporterWithLegacyOCRAndAutoSendToRegistry.CandidateFile>, Set<DoseReporterWithLegacyOCRAndAutoSendToRegistry.CandidateFile>, long) - Method in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
findClosestSliceInSamePlane(GeometryOfSlice) - Method in class com.pixelmed.geometry.GeometryOfVolume: Find the slice in the our geometry that is closest to the supplied slice geometry.
findCodeInEntriesFirstThenTryCodeMeaningInEntriesThenTryLongestIndividualEntryContainedWithinCodeMeaning(CodedSequenceItem) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
findCodeSequenceItemsAndConvertSRTCodesToSCT(AttributeList) - Method in class com.pixelmed.apps.ConvertSRTCodesToSCT: Convert SRT codes to SCT codes (per CP 1850) in the this and its children.
findCodeStringExact(String) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
findComponentsOfClass(ArrayList<Component>, Component, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
findComponentsOfClass(Component, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
findComponentsOfClass(String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
findComponentsOfClassWithTextValue(ArrayList<Component>, Component, String, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
findComponentsOfClassWithTextValue(Component, String, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
findComponentsOfClassWithTextValue(String, String) - Static method in class com.pixelmed.test.UserInterfaceUtilities
findCTSeriesAndRelatedRecordsInQueryTree(QueryTreeRecord, ArrayList<QueryTreeRecord>) - Static method in class com.pixelmed.apps.DoseUtility
findDoseSeriesRecordsInQueryTree(QueryTreeRecord, ArrayList<QueryTreeRecord>) - Static method in class com.pixelmed.apps.DoseUtility
findEarliestDate(Map<String, Date>, Vector<String>) - Static method in class com.pixelmed.display.DicomCleaner
findEarliestDateTime(AttributeList, Date, String) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes: Get the earliest patient event related date and time.
findEarliestDateTime(AttributeList) - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes: Get the earliest patient event related date and time.
findFilesToSend(InformationEntity, String, List<String>) - Method in class com.pixelmed.apps.MultiModalitySimulator
findHierarchicalReferencesToSOPInstances(AttributeList) - Static method in class com.pixelmed.dicom.HierarchicalSOPInstanceReference: Find hierarchical references to instances that may be referenced anywhere in any dataset regardless of depth of nesting.
findHierarchicalReferencesToSOPInstancesInStructuredReport(AttributeList) - Static method in class com.pixelmed.dicom.HierarchicalSOPInstanceReference: Find hierarchical references to instances that may be referenced in the content tree of an SR object.
findImageLibraryContainer(ContentItem) - Static method in class com.pixelmed.dicom.ImageLibrary: Find the Image Library contained within an SR content tree.
findInEntriesFirstThenTryLongestIndividualEntryContainedWithin(String) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
findLaterality(AttributeList, DisplayableAnatomicConcept) - Static method in class com.pixelmed.anatproc.ProjectionXRayAnatomy
findLead(String[], String) - Static method in class com.pixelmed.displaywave.SourceECG: Find the named lead in an array of lead names.
findLongestIndividualEntryContainedWithin(String) - Method in class com.pixelmed.anatproc.DictionaryOfConcepts
findMaxComponents() - Method in class com.pixelmed.geometry.GeometryOfSlice
findMaxComponents(double[], double[], double[]) - Method in class com.pixelmed.geometry.GeometryOfVolume
findSelectedAttributeValuesForSelectedRecord(InformationEntity, String, String) - Method in class com.pixelmed.database.DatabaseInformationModel: For a particular instance of an information entity, get the value of the selected column in the entity's database table.
FindSOPClassSCU - Class in com.pixelmed.network: This class implements the SCU role of C-FIND SOP Classes.
FindSOPClassSCU(Association, String, AttributeList, IdentifierHandler) - Constructor for class com.pixelmed.network.FindSOPClassSCU
FindSOPClassSCU(String, int, String, String, String, AttributeList, IdentifierHandler) - Constructor for class com.pixelmed.network.FindSOPClassSCU
findSuitableSRFilesAndSendThemToRegistry(String) - Method in class com.pixelmed.apps.DoseReporterWithLegacyOCRAndAutoSendToRegistry
findView(AttributeList) - Static method in class com.pixelmed.anatproc.ProjectionXRayAnatomy
finish() - Method in class com.pixelmed.apps.PseudonymizeAndSequester.OurMediaImporter
firstCharacterPossibilities - Variable in class com.pixelmed.network.ProbeCapability.StringPermutationGenerator
firstValueMapped - Variable in class com.pixelmed.apps.InsertRealWorldValueMap
fitToWindow - Variable in class com.pixelmed.display.DisplayedAreaSelection
FIXED_HEADER_LENGTH - Static variable in class com.pixelmed.convert.AnalyzeHeader
FIXED_HEADER_LENGTH - Static variable in class com.pixelmed.convert.NIfTI1Header
FL - Static variable in class com.pixelmed.dicom.ValueRepresentation
flipHorizontally(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities
flipVertically(BufferedImage) - Static method in class com.pixelmed.display.BufferedImageUtilities
FLOAT - Static variable in class com.pixelmed.convert.TIFFTypes
FloatArrayStatistics(float, float) - Constructor for class com.pixelmed.display.PlotGraph.FloatArrayStatistics
FloatArrayStatistics(float[]) - Constructor for class com.pixelmed.display.PlotGraph.FloatArrayStatistics
FloatDoubleAttribute - Class in com.pixelmed.dicom: A concrete class specializing Attribute for Float Double (FD) attributes.
FloatDoubleAttribute(AttributeTag) - Constructor for class com.pixelmed.dicom.FloatDoubleAttribute: Construct an (empty) attribute.
FloatDoubleAttribute(AttributeTag, long, DicomInputStream) - Constructor for class com.pixelmed.dicom.FloatDoubleAttribute: Read an attribute from an input stream.
FloatDoubleAttribute(AttributeTag, Long, DicomInputStream) - Constructor for class com.pixelmed.dicom.FloatDoubleAttribute: Read an attribute from an input stream.
FloatFormatter - Class in com.pixelmed.utils: Various static methods helpful for formatting floating point values.
floatingPointValue - Variable in class com.pixelmed.dicom.ContentItemFactory.NumericContentItem
FloatingPointValue - Static variable in class com.pixelmed.dicom.TagFromName
FloatPixelData - Static variable in class com.pixelmed.dicom.TagFromName
FloatSingleAttribute - Class in com.pixelmed.dicom: A concrete class specializing Attribute for Float Single (FL) attributes.
FloatSingleAttribute(AttributeTag) - Constructor for class com.pixelmed.dicom.FloatSingleAttribute: Construct an (empty) attribute.
FloatSingleAttribute(AttributeTag, long, DicomInputStream) - Constructor for class com.pixelmed.dicom.FloatSingleAttribute: Read an attribute from an input stream.
FloatSingleAttribute(AttributeTag, Long, DicomInputStream) - Constructor for class com.pixelmed.dicom.FloatSingleAttribute: Read an attribute from an input stream.
flush() - Method in class com.pixelmed.dicom.AsynchronousOutputStream: Flushes this output stream and forces any buffered output bytes to be written out to the stream.
flush() - Method in class com.pixelmed.dicom.NullOutputStream
flush() - Method in class com.pixelmed.network.AssociationOutputStream: Do nothing.
flush() - Method in class com.pixelmed.transfermonitor.MonitoredOutputStream
flush() - Method in class com.pixelmed.utils.ScrollingTextAreaWriter
flushCachedCopies() - Method in class com.pixelmed.dicom.StringAttribute
flushMapOfUIDs() - Static method in class com.pixelmed.dicom.ClinicalTrialsAttributes: Flush (remove all entries in) the map of original UIDs to replacement UIDs.
FMA - Static variable in class com.pixelmed.dicom.CodingSchemeIdentification
FolderNamingStrategy() - Constructor for class com.pixelmed.dicom.MoveDicomFilesIntoHierarchy.FolderNamingStrategy
folderNamingStrategyToUseIfUnspecified - Static variable in class com.pixelmed.dicom.MoveDicomFilesIntoHierarchy
forceFitEntireMatrixToWindow - Variable in class com.pixelmed.display.MammoImageViewer
FRAME - Static variable in class com.pixelmed.dicom.InformationEntity
frame - Variable in class com.pixelmed.display.ChestImageViewer
frame - Variable in class com.pixelmed.display.MammoImageViewer
FrameAcquisitionDateTime - Static variable in class com.pixelmed.dicom.TagFromName
FrameAcquisitionDuration - Static variable in class com.pixelmed.dicom.TagFromName
FrameAcquisitionNumber - Static variable in class com.pixelmed.dicom.TagFromName
FrameAnatomySequence - Static variable in class com.pixelmed.dicom.TagFromName
FrameComments - Static variable in class com.pixelmed.dicom.TagFromName
framecontent - Variable in class com.pixelmed.dicom.FunctionalGroupUtilities.Selector
FrameContentSequence - Static variable in class com.pixelmed.dicom.TagFromName
FRAMECOUNT - Static variable in class com.pixelmed.convert.TIFFTags
frameHeight - Variable in class com.pixelmed.display.ChestImageViewer
frameHeight - Variable in class com.pixelmed.display.MammoImageViewer
FrameIncrementPointer - Static variable in class com.pixelmed.dicom.TagFromName
frameItemByteOffsets - Variable in class com.pixelmed.dicom.OtherByteAttributeCompressedSeparateFramesOnDisk
frameItemLengths - Variable in class com.pixelmed.dicom.OtherByteAttributeCompressedSeparateFramesOnDisk
FrameLaterality - Static variable in class com.pixelmed.dicom.TagFromName
FRAMENUMBER - Static variable in class com.pixelmed.display.DemographicAndTechniqueAnnotations
frameOfReference - Variable in class com.pixelmed.dicom.CompositeInstanceContext.Selector
frameOfReferenceModuleAttributeTags - Static variable in class com.pixelmed.dicom.CompositeInstanceContext
frameOfReferenceUID - Variable in class com.pixelmed.dicom.CrossSectionalImageLibrary.CrossSectionalImageLibraryEntry
FrameOfReferenceUID - Static variable in class com.pixelmed.dicom.TagFromName
frameOfReferenceUID - Variable in class com.pixelmed.dose.CTAcquisitionParameters
FrameReferenceDateTime - Static variable in class com.pixelmed.dicom.TagFromName
FrameReferenceTime - Static variable in class com.pixelmed.dicom.TagFromName
frames - Variable in class com.pixelmed.convert.RawImageDescription
frames - Variable in class com.pixelmed.dicom.OtherByteAttributeMultipleCompressedFrames
frames - Variable in class com.pixelmed.geometry.GeometryOfVolume
framesAreSeparated() - Method in class com.pixelmed.dicom.EncapsulatedInputStream: Are frames separated (seperable)?
FrameSelectionChangeEvent - Class in com.pixelmed.display.event
FrameSelectionChangeEvent(EventContext, int) - Constructor for class com.pixelmed.display.event.FrameSelectionChangeEvent
FrameSet - Class in com.pixelmed.dicom: A class to describe a set of frames sharing common characteristics suitable for display or analysis as an entity.
framesForSegmentBySegmentNumber - Variable in class com.pixelmed.display.SuperimposedDicomSegments
FrameSortOrderChangeEvent - Class in com.pixelmed.display.event
FrameSortOrderChangeEvent(EventContext, int[], int) - Constructor for class com.pixelmed.display.event.FrameSortOrderChangeEvent
FrameTime - Static variable in class com.pixelmed.dicom.TagFromName
FrameType - Static variable in class com.pixelmed.dicom.TagFromName
FrameVOILUTSequence - Static variable in class com.pixelmed.dicom.TagFromName
frameWidth - Variable in class com.pixelmed.display.ChestImageViewer
frameWidth - Variable in class com.pixelmed.display.MammoImageViewer
FREE - Static variable in class com.pixelmed.dose.CTScanType
FREEBYTECOUNTS - Static variable in class com.pixelmed.convert.TIFFTags
FREEOFFSETS - Static variable in class com.pixelmed.convert.TIFFTags
fromString(String) - Static method in class com.pixelmed.dicom.InformationEntity: Get the information entity corresponding to the string name
fromString(String, int, char) - Static method in class com.pixelmed.utils.FloatFormatter: Extract a specified number of delimited numeric values from a string into an array of doubles.
fromString(String, char) - Static method in class com.pixelmed.utils.FloatFormatter: Extract an arbitrary number of delimited numeric values from a string into an array of doubles.
ftpApplicationProperties - Variable in class com.pixelmed.apps.DoseUtility
ftpApplicationProperties - Variable in class com.pixelmed.apps.DownloadOrTransmit
FTPApplicationProperties - Class in com.pixelmed.ftp: This class provides common support to applications requiring properties related to FTP network services.
FTPApplicationProperties() - Constructor for class com.pixelmed.ftp.FTPApplicationProperties: Create default properties.
FTPApplicationProperties(Properties) - Constructor for class com.pixelmed.ftp.FTPApplicationProperties: Extract the ftp properties from the supplied properties.
ftpApplicationProperties - Variable in class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog
ftpButtonLabel - Static variable in class com.pixelmed.apps.DownloadOrTransmit
ftpButtonToolTipText - Static variable in class com.pixelmed.apps.DownloadOrTransmit
FTPClientApplicationConfigurationDialog - Class in com.pixelmed.ftp: This class provides a user interface for applications to configure and test properties related to remote FTP hosts.
FTPClientApplicationConfigurationDialog(Component, FTPRemoteHostInformation, FTPApplicationProperties) - Constructor for class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog: Configure and test network information.
FTPClientApplicationConfigurationDialog.AddRemoteHostActionListener - Class in com.pixelmed.ftp
FTPClientApplicationConfigurationDialog.DoneActionListener - Class in com.pixelmed.ftp
FTPClientApplicationConfigurationDialog.EditRemoteHostActionListener - Class in com.pixelmed.ftp
FTPClientApplicationConfigurationDialog.RemoveRemoteHostActionListener - Class in com.pixelmed.ftp
FTPException - Exception in com.pixelmed.ftp
FTPException(String) - Constructor for exception com.pixelmed.ftp.FTPException
FTPException(FTPException) - Constructor for exception com.pixelmed.ftp.FTPException
FTPFileSender - Class in com.pixelmed.ftp: A class to send files via FTP or secure FTP over TLS.
FTPFileSender(FTPRemoteHost, String[], boolean, MessageLogger, JProgressBar) - Constructor for class com.pixelmed.ftp.FTPFileSender: Construct an ftp connection to send a list of files to a remote server.
FTPFileSender(String, String, String, String, String[], boolean, boolean) - Constructor for class com.pixelmed.ftp.FTPFileSender: Construct an ftp connection to send a list of files to a remote server.
FTPFileSender(String, String, String, String, String[], boolean, boolean, MessageLogger, JProgressBar) - Constructor for class com.pixelmed.ftp.FTPFileSender: Construct an ftp connection to send a list of files to a remote server.
FTPRemoteHost - Class in com.pixelmed.ftp: This class provides a description of the parameters of a remote FTP host.
FTPRemoteHost() - Constructor for class com.pixelmed.ftp.FTPRemoteHost
FTPRemoteHost(FTPRemoteHost) - Constructor for class com.pixelmed.ftp.FTPRemoteHost
FTPRemoteHost(String, String, String, String, FTPSecurityType) - Constructor for class com.pixelmed.ftp.FTPRemoteHost
FTPRemoteHost(String, String, String, String, String) - Constructor for class com.pixelmed.ftp.FTPRemoteHost
FTPRemoteHostConfigurationDialog - Class in com.pixelmed.ftp: This class implements a dialog for users to enter ftp remote host configuration parameters.
FTPRemoteHostConfigurationDialog(Component, String, FTPRemoteHost) - Constructor for class com.pixelmed.ftp.FTPRemoteHostConfigurationDialog: Configure ftp remote host information.
FTPRemoteHostConfigurationDialog(String, FTPRemoteHost) - Constructor for class com.pixelmed.ftp.FTPRemoteHostConfigurationDialog: Configure ftp remote host information.
FTPRemoteHostConfigurationDialog(Component, String) - Constructor for class com.pixelmed.ftp.FTPRemoteHostConfigurationDialog: Create new ftp remote host information.
FTPRemoteHostConfigurationDialog(Component) - Constructor for class com.pixelmed.ftp.FTPRemoteHostConfigurationDialog: Create new ftp remote host information.
FTPRemoteHostConfigurationDialog() - Constructor for class com.pixelmed.ftp.FTPRemoteHostConfigurationDialog: Create new ftp remote host information.
ftpRemoteHostInformation - Variable in class com.pixelmed.apps.DoseUtility
ftpRemoteHostInformation - Variable in class com.pixelmed.apps.DownloadOrTransmit
ftpRemoteHostInformation - Variable in class com.pixelmed.ftp.FTPApplicationProperties
ftpRemoteHostInformation - Variable in class com.pixelmed.ftp.FTPClientApplicationConfigurationDialog
FTPRemoteHostInformation - Class in com.pixelmed.ftp: This class encapsulates information about remote FTP servers.
FTPRemoteHostInformation() - Constructor for class com.pixelmed.ftp.FTPRemoteHostInformation: Construct an empty container for properties of FTP network devices.
FTPRemoteHostInformation(Properties) - Constructor for class com.pixelmed.ftp.FTPRemoteHostInformation: Extract the FTP network properties from the supplied properties.
FTPSecurityType - Class in com.pixelmed.ftp: This class provides a description of the parameters of a remote FTP host.
FtpSendActionListener() - Constructor for class com.pixelmed.apps.DownloadOrTransmit.FtpSendActionListener
fullNameByTag - Variable in class com.pixelmed.dicom.DicomDictionaryBase
fullyQualifiedMenuEntry - Variable in class com.pixelmed.anatproc.DisplayableConcept
FunctionalGroupPointer - Static variable in class com.pixelmed.dicom.TagFromName
functionalGroupsReplacementsList - Variable in class com.pixelmed.apps.SetCharacteristicsFromSummary
FunctionalGroupUtilities - Class in com.pixelmed.dicom: A class contain useful methods for manipulating Functional Group Sequences.
FunctionalGroupUtilities() - Constructor for class com.pixelmed.dicom.FunctionalGroupUtilities
FunctionalGroupUtilities.Selector - Class in com.pixelmed.dicom: A class to select which functional groups are copied or propagated or removed or not during operations on functional groups.
funused1 - Variable in class com.pixelmed.convert.AnalyzeHeader
funused2 - Variable in class com.pixelmed.convert.AnalyzeHeader
funused3 - Variable in class com.pixelmed.convert.AnalyzeHeader

G

GantryID - Static variable in class com.pixelmed.dicom.TagFromName
GeneralAudioWaveformStorage - Static variable in class com.pixelmed.dicom.SOPClass
GeneralECGStorage - Static variable in class com.pixelmed.dicom.SOPClass
generalEquipmentModuleAttributeTags - Static variable in class com.pixelmed.dicom.CompositeInstanceContext
generalImageModuleAttributeTags - Static variable in class com.pixelmed.dicom.CompositeInstanceContext
generalSeriesModuleAttributeTags - Static variable in class com.pixelmed.dicom.CompositeInstanceContext
generalStudyModuleAttributeTags - Static variable in class com.pixelmed.dicom.CompositeInstanceContext
generateCommonAttributes(AttributeList, String, String, String, String, String, String, String, boolean) - Static method in class com.pixelmed.convert.CommonConvertedAttributeGeneration: Generate common attributes for converted images.
generated - Variable in class com.pixelmed.convert.AnalyzeHeader
generateDICOMPixelDataModuleAttributesFromAnalyzeFile(File, AnalyzeHeader, AttributeList) - Static method in class com.pixelmed.convert.AnalyzeToDicom: Using an Analyze image input file and header, create DICOM Pixel Data Module attributes.
generateDICOMPixelDataModuleAttributesFromNIfTI1File(File, NIfTI1Header, AttributeList) - Static method in class com.pixelmed.convert.NIfTI1ToDicom: Using a NIfTI-1 image input file and header, create DICOM Pixel Data Module attributes.
generateDICOMPixelDataModuleAttributesFromNRRDFile(File, NRRDHeader, AttributeList) - Static method in class com.pixelmed.convert.NRRDToDicom: Using an NRRD image input file and header, create DICOM Pixel Data Module attributes.
generateDICOMPixelDataModuleAttributesFromNRRDFile(File, RawImageDescription, AttributeList) - Static method in class com.pixelmed.convert.RawToDicomMultiFrame: Using a raw image input file and header, create DICOM Pixel Data Module attributes.
generateDICOMPixelDataModuleAttributesFromRawRGBFiles(String[], String, RawRGBInformation, AttributeList) - Static method in class com.pixelmed.convert.RawRGBToDicomMultiFrame: Create DICOM Pixel Data Module attributes.
generateDICOMPixelModuleFromConsumerImageFile(String, AttributeList) - Static method in class com.pixelmed.dicom.EncapsulateImageInDicom: Read a consumer image format input file (anything JIIO can recognize), and create a single frame DICOM Image Pixel Module.
generateDICOMPixelModuleFromConsumerImageFile(File, AttributeList) - Static method in class com.pixelmed.dicom.EncapsulateImageInDicom: Read a consumer image format input file (anything JIIO can recognize), and create a single frame DICOM Image Pixel Module.
generateDICOMPixelModuleFromConsumerImageFile(String) - Static method in class com.pixelmed.dicom.EncapsulateImageInDicom: Read a consumer image format input file (anything JIIO can recognize), and create a single frame DICOM Image Pixel Module.
generateDICOMPixelModuleFromConsumerImageFile(String, AttributeList) - Static method in class com.pixelmed.dicom.ImageToDicom: Read a consumer image format input file (anything JIIO can recognize), and create a single frame DICOM Image Pixel Module.
generateDICOMPixelModuleFromConsumerImageFile(File, AttributeList) - Static method in class com.pixelmed.dicom.ImageToDicom: Read a consumer image format input file (anything JIIO can recognize), and create a single frame DICOM Image Pixel Module.
generateDICOMPixelModuleFromConsumerImageFile(String) - Static method in class com.pixelmed.dicom.ImageToDicom: Read a consumer image format input file (anything JIIO can recognize), and create a single frame DICOM Image Pixel Module.
generateDimensions(AttributeList) - Static method in class com.pixelmed.convert.NIfTI1ToDicom: Create a Dimensions Module.
generateDimensions(AttributeList) - Static method in class com.pixelmed.convert.NRRDToDicom: Create a Dimensions Module.
generateDoseReportInformation(DatabaseTreeRecord[], JEditorPane, StringBuffer, boolean, MessageLogger, SafeProgressBarUpdaterThread, int, int) - Method in class com.pixelmed.apps.DoseUtility
generateDoseReportInformation(DatabaseTreeRecord, JEditorPane, StringBuffer, boolean, MessageLogger, SafeProgressBarUpdaterThread, int, int) - Method in class com.pixelmed.apps.DoseUtility
generateDoseReportInformationFromFiles(Vector) - Static method in class com.pixelmed.doseocr.GenerateRadiationDoseStructuredReport: Extract dose information from a screen or report, correlate it with any acquired CT slice images as required, and generate a radiation dose SR.
generateDoseReportInformationFromFiles(Vector, boolean) - Static method in class com.pixelmed.doseocr.RenderedDoseReport: Extract dose information from a screen or report, correlate it with any acquired CT slice images as required, and generate a human-readable report.
generateDoseReportInformationFromFiles(Vector, boolean, String) - Static method in class com.pixelmed.doseocr.RenderedDoseReport: Extract dose information from a screen or report, correlate it with any acquired CT slice images as required, and generate a human-readable report.
generateDoseSR(DatabaseInformationModel, DatabaseTreeRecord[], MessageLogger, SafeProgressBarUpdaterThread, int, int) - Method in class com.pixelmed.apps.DoseUtility
generateDoseSR(DatabaseInformationModel, DatabaseTreeRecord, MessageLogger, SafeProgressBarUpdaterThread, int, int) - Method in class com.pixelmed.apps.DoseUtility
generateFrameTypeSharedFunctionalGroup(AttributeList, AttributeTag, Attribute) - Static method in class com.pixelmed.dicom.FunctionalGroupUtilities: Insert a shared functional group sequence FrameTypeSequence entry.
generateGeometryFunctionalGroupsFromAnalyzeHeader(AnalyzeHeader, AttributeList, int) - Static method in class com.pixelmed.convert.AnalyzeToDicom: Read a per-frame and shared functional group sequences for the geometry defined in a Analyze file header.
generateGeometryFunctionalGroupsFromNIfTI1Header(NIfTI1Header, AttributeList, int) - Static method in class com.pixelmed.convert.NIfTI1ToDicom: Read a per-frame and shared functional group sequences for the geometry defined in a NIfTI-1 file header.
generateGeometryFunctionalGroupsFromNRRDHeader(NRRDHeader, AttributeList) - Static method in class com.pixelmed.convert.NRRDToDicom: Read a per-frame and shared functional group sequences for the geometry defined in a NRRD file header.
generateGeometryFunctionalGroupsFromRawRGBInformation(RawRGBInformation, AttributeList, int) - Static method in class com.pixelmed.convert.RawRGBToDicomMultiFrame: Read a per-frame and shared functional group sequences for the geometry defined in a raw image file description.
generatePixelValueTransformationFunctionalGroup(AttributeList, int, double, double, String) - Static method in class com.pixelmed.dicom.FunctionalGroupUtilities: Insert a shared functional group sequence Pixel Value Transformation Sequence entry.
GenerateRadiationDoseStructuredReport - Class in com.pixelmed.doseocr
GenerateRadiationDoseStructuredReport() - Constructor for class com.pixelmed.doseocr.GenerateRadiationDoseStructuredReport
generateResponseToGetRequest(String, OutputStream) - Method in class com.pixelmed.web.HttpServer.Worker
generateResponseToGetRequest(String, OutputStream) - Method in class com.pixelmed.web.RequestTypeServer.RequestTypeWorker
generateResponseToGetRequest(String, OutputStream) - Method in class com.pixelmed.web.WadoServer.WADOWorker
generateSyntheticStudyFromOriginal(List<String>, String, String, String, String, String, String) - Method in class com.pixelmed.apps.MultiModalitySimulator
generateUnassignedConvertedAttributesSequenceFunctionalGroups(AttributeList, int) - Static method in class com.pixelmed.dicom.FunctionalGroupUtilities: Create shared and per-frame Unassigned Converted Attributes functional group sequences if not already present.
generateVOILUTFunctionalGroup(AttributeList, int, double, double, String) - Static method in class com.pixelmed.dicom.FunctionalGroupUtilities: Insert a shared functional group sequence Frame VOI LUT Sequence entry.
generator - Variable in class com.pixelmed.apps.TiledPyramid
GenericImplantTemplateStorage - Static variable in class com.pixelmed.dicom.SOPClass
GeneticModificationsSequence - Static variable in class com.pixelmed.dicom.TagFromName
geometry - Variable in class com.pixelmed.dicom.CrossSectionalImageLibrary.CrossSectionalImageLibraryEntry
GeometryOfSlice - Class in com.pixelmed.geometry: A class to describe the spatial geometry of a single cross-sectional image slice.
GeometryOfSlice() - Constructor for class com.pixelmed.geometry.GeometryOfSlice: Construct an empty geometry.
GeometryOfSlice(Vector3d, Vector3d, Point3d, Tuple3d, double, Tuple3d) - Constructor for class com.pixelmed.geometry.GeometryOfSlice: Construct the geometry.
GeometryOfSlice(double[], double[], double[], double[], double, double[]) - Constructor for class com.pixelmed.geometry.GeometryOfSlice: Construct the geometry.
GeometryOfSliceFromAttributeList - Class in com.pixelmed.dicom: A class to extract and describe the spatial geometry of a single cross-sectional image slice, given a list of DICOM attributes.
GeometryOfSliceFromAttributeList(AttributeList) - Constructor for class com.pixelmed.dicom.GeometryOfSliceFromAttributeList: Construct the geometry from the Image Plane Module and related attributes.
GeometryOfVolume - Class in com.pixelmed.geometry: A class to describe the spatial geometry of an entire volume of contiguous cross-sectional image slices.
GeometryOfVolume() - Constructor for class com.pixelmed.geometry.GeometryOfVolume
GeometryOfVolume(GeometryOfSlice[]) - Constructor for class com.pixelmed.geometry.GeometryOfVolume
GeometryOfVolumeFromAttributeList - Class in com.pixelmed.dicom: A class to extract and describe the spatial geometry of an entire volume of contiguous cross-sectional image slices, given a list of DICOM attributes.
GeometryOfVolumeFromAttributeList(AttributeList, int[]) - Constructor for class com.pixelmed.dicom.GeometryOfVolumeFromAttributeList: Construct the geometry from the Per-frame and Shared Functional Group Sequences of a subset of frames of a multi-frame object, or from the Image Plane Module and related attributes, if there is only a single frame of a non-multi-frame object.
GeometryOfVolumeFromAttributeList(AttributeList) - Constructor for class com.pixelmed.dicom.GeometryOfVolumeFromAttributeList: Construct the geometry from the Per-frame and Shared Functional Group Sequences of a multi-frame object, or from the Image Plane Module and related attributes, if there is only a single frame of a non-multi-frame object.
get(AttributeTag) - Method in class com.pixelmed.dicom.AttributeList: Returns the value (attribute) to which this map maps the specified key (tag).
get(AttributeTag, String) - Method in class com.pixelmed.dicom.