com.pixelmed.dicom

Class CrossSectionalImageLibrary

java.lang.Object

com.pixelmed.dicom.ImageLibrary

com.pixelmed.dicom.CrossSectionalImageLibrary

public class CrossSectionalImageLibrary
extends ImageLibrary

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	CrossSectionalImageLibrary.CrossSectionalImageLibraryEntry

Nested classes/interfaces inherited from class com.pixelmed.dicom.ImageLibrary

ImageLibrary.ImageLibraryEntry

Field Summary

Fields inherited from class com.pixelmed.dicom.ImageLibrary

compositeInstanceContext, entriesIndexedBySOPInstanceUID

Constructor Summary

Constructors

Constructor and Description
CrossSectionalImageLibrary()
CrossSectionalImageLibrary(AttributeList list)
CrossSectionalImageLibrary(ContentItem imageLibraryContainer, AttributeList list)
CrossSectionalImageLibrary(java.util.Set<java.io.File> files)

Method Summary

Modifier and Type	Method and Description
double[]	getColumnArray(java.lang.String sopInstanceUID)
java.lang.String	getFrameOfReferenceUID(java.lang.String sopInstanceUID)
double[]	getRowArray(java.lang.String sopInstanceUID)
double	getSliceThickness(java.lang.String sopInstanceUID)
java.lang.String	getSOPClassUID(java.lang.String sopInstanceUID)
double[]	getTLHCArray(java.lang.String sopInstanceUID)
double[]	getVoxelSpacingArray(java.lang.String sopInstanceUID)
static void	main(java.lang.String[] arg) Create an SR Image Library from a bunch of cross-sectional DICOM instances.
ImageLibrary.ImageLibraryEntry	makeImageLibraryEntry(AttributeList list)
ImageLibrary.ImageLibraryEntry	makeImageLibraryEntry(ContentItemFactory.ImageContentItem imageContentItem, java.util.Map<java.lang.String,HierarchicalSOPInstanceReference> hierarchicalSOPInstanceReferencesIndexedBySOPInstanceUID)
static double	parseDoubleElseZero(java.lang.String s)
static CrossSectionalImageLibrary	read(java.lang.String filename)

Methods inherited from class com.pixelmed.dicom.ImageLibrary

addContributingEquipmentSequence, addImage, constructImageLibrary, findImageLibraryContainer, getAttributeList, getCommonInstanceReferenceModuleReferencedSeriesSequence, getHierarchicalEvidenceSequence, getHierarchicalSOPInstanceReferencesIndexedBySOPInstanceUID, getStructuredReport, getStructuredReportFragment, toString, write, write

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

CrossSectionalImageLibrary

public CrossSectionalImageLibrary()

CrossSectionalImageLibrary

public CrossSectionalImageLibrary(AttributeList list)
                           throws DicomException

Throws:

DicomException

CrossSectionalImageLibrary

public CrossSectionalImageLibrary(ContentItem imageLibraryContainer,
                                  AttributeList list)

CrossSectionalImageLibrary

public CrossSectionalImageLibrary(java.util.Set<java.io.File> files)
                           throws java.io.IOException,
                                  DicomException

Throws:

java.io.IOException

DicomException

Method Detail

getColumnArray

public double[] getColumnArray(java.lang.String sopInstanceUID)

getFrameOfReferenceUID

public java.lang.String getFrameOfReferenceUID(java.lang.String sopInstanceUID)

getRowArray

public double[] getRowArray(java.lang.String sopInstanceUID)

getSliceThickness

public double getSliceThickness(java.lang.String sopInstanceUID)

getSOPClassUID

public java.lang.String getSOPClassUID(java.lang.String sopInstanceUID)

getTLHCArray

public double[] getTLHCArray(java.lang.String sopInstanceUID)

getVoxelSpacingArray

public double[] getVoxelSpacingArray(java.lang.String sopInstanceUID)

main

public static void main(java.lang.String[] arg)

Create an SR Image Library from a bunch of cross-sectional DICOM instances.

Adds a new series (instance UID) to the existing study (instance UID).

Parameters:

arg - the path for the SR Image Library output, then the filenames and/or folder names of files containing the input image files

makeImageLibraryEntry

public ImageLibrary.ImageLibraryEntry makeImageLibraryEntry(AttributeList list)
                                                     throws DicomException

Overrides:

makeImageLibraryEntry in class ImageLibrary

Throws:

DicomException

makeImageLibraryEntry

public ImageLibrary.ImageLibraryEntry makeImageLibraryEntry(ContentItemFactory.ImageContentItem imageContentItem,
                                                            java.util.Map<java.lang.String,HierarchicalSOPInstanceReference> hierarchicalSOPInstanceReferencesIndexedBySOPInstanceUID)

Overrides:

makeImageLibraryEntry in class ImageLibrary

parseDoubleElseZero

public static final double parseDoubleElseZero(java.lang.String s)

read

public static CrossSectionalImageLibrary read(java.lang.String filename)
                                       throws DicomException,
                                              java.io.IOException

Throws:

DicomException

java.io.IOException