com.pixelmed.apps

Class MergeFunctionalGroups

java.lang.Object

com.pixelmed.apps.MergeFunctionalGroups

public class MergeFunctionalGroups
extends java.lang.Object

A class containing an application for merging the functional groups of multiple instances for consistency.

The merge can be performed on specified subsets of functional groups, such as those related to spatial information.

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
protected class	MergeFunctionalGroups.OurFirstPassMediaImporter
protected class	MergeFunctionalGroups.OurSecondPassMediaImporter

Field Summary

Fields

Modifier and Type	Field and Description
protected java.lang.String	dstFolderName
protected java.lang.String	ourAETitle
protected FunctionalGroupUtilities.Selector	selector

Constructor Summary

Constructors

Constructor and Description
MergeFunctionalGroups(FunctionalGroupUtilities.Selector selector, java.lang.String[] srcs, java.lang.String dstFolderName, MessageLogger logger) Merge the functional groups of multiple instances for consistency.
MergeFunctionalGroups(FunctionalGroupUtilities.Selector selector, java.lang.String src, java.lang.String dstFolderName, MessageLogger logger) Merge the functional groups of multiple instances for consistency.

Method Summary

Modifier and Type	Method and Description
static void	main(java.lang.String[] arg) Merge the functional groups of multiple instances for consistency.
protected void	mergeDimensionsModule(AttributeList newList)
protected void	mergeSelectedFunctionalGroup(SequenceAttribute mergedSharedOrPerFrameFunctionalGroupsSequence, SequenceAttribute newSharedOrPerFrameFunctionalGroupsSequence)
protected void	mergeSelectedFunctionalGroups(AttributeList newList)
protected void	replaceDimensionsModuleWithMerged(AttributeList targetList)
protected void	replaceFunctionalGroupsWithMerged(AttributeList targetList)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

dstFolderName

protected java.lang.String dstFolderName

ourAETitle

protected java.lang.String ourAETitle

selector

protected FunctionalGroupUtilities.Selector selector

Constructor Detail

MergeFunctionalGroups

public MergeFunctionalGroups(FunctionalGroupUtilities.Selector selector,
                             java.lang.String[] srcs,
                             java.lang.String dstFolderName,
                             MessageLogger logger)
                      throws java.io.IOException,
                             DicomException

Merge the functional groups of multiple instances for consistency.

Parameters:

selector - selected functional groups to merge

srcs - source folders or DICOMDIRs

dstFolderName - destination folder

logger - logger to send progress, warnings and errors

Throws:

java.io.IOException - if there is a problem reading or writing

DicomException - if there is a problem parsing or extracting required content

MergeFunctionalGroups

public MergeFunctionalGroups(FunctionalGroupUtilities.Selector selector,
                             java.lang.String src,
                             java.lang.String dstFolderName,
                             MessageLogger logger)
                      throws java.io.IOException,
                             DicomException

Merge the functional groups of multiple instances for consistency.

Parameters:

selector - selected functional groups to merge

src - source folder or DICOMDIR

dstFolderName - destination folder

logger - logger to send progress, warnings and errors

Throws:

java.io.IOException - if there is a problem reading or writing

DicomException - if there is a problem parsing or extracting required content

Method Detail

main

public static void main(java.lang.String[] arg)

Merge the functional groups of multiple instances for consistency.

The files are processed in the order in which they are specified on the command line, and when there is a conflict, the first encountered functional group values are used.

Functional group arguments recognized are -all|-spatial|-framecontent|-unclassified.

If -framecontent is specified, the Dimensions Module will also be merged (the earliest encountered will be used).

Parameters:

arg - array of 2 or more strings - an optional list of functional groups to merge (if absent, defaults to all), followed by one or more source folders or DICOMDIR (to merge and use as a source of functional groups), and a destination folder

mergeDimensionsModule

protected void mergeDimensionsModule(AttributeList newList)
                              throws DicomException

Throws:

DicomException

mergeSelectedFunctionalGroup

protected void mergeSelectedFunctionalGroup(SequenceAttribute mergedSharedOrPerFrameFunctionalGroupsSequence,
                                            SequenceAttribute newSharedOrPerFrameFunctionalGroupsSequence)
                                     throws DicomException

Throws:

DicomException

mergeSelectedFunctionalGroups

protected void mergeSelectedFunctionalGroups(AttributeList newList)
                                      throws DicomException

Throws:

DicomException

replaceDimensionsModuleWithMerged

protected void replaceDimensionsModuleWithMerged(AttributeList targetList)

replaceFunctionalGroupsWithMerged

protected void replaceFunctionalGroupsWithMerged(AttributeList targetList)